Syngnathus scovelli (Gulf pipefish): 125972414
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Entry
125972414 CDS
T08785
Name
(RefSeq) WD repeat-containing protein 47 isoform X1
KO
K24746
WD repeat-containing protein 47
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125972414
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
125972414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
LisH_TPL
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
TPR1-like_2nd
WD_LRWD1
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
125972414
NCBI-ProteinID:
XP_049582036
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Position
10:8857149..8867143
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AA seq
878 aa
AA seq
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MTAEEKINIKEAEVVKLVLDFLSSRKLHISMLALEKESSVINGLYSDDMLFLRQLILDGQ
WEEVMQFIQPLEGLDKFDKKRFRYIILKQKFLEALCVNNAMSAIEDPQNLELTMQDAVRC
LHNLEEFCPSKDDYGKLCLLLTLPRLTHHAEFRDWNPSTARVHCFEEACVMVAEFIPADR
KLSEAGFRASGNRLFHLLIKGILYECCVEFCQSKATGEAITEGEVLLGVDLLCGNGCDEV
DLSLLSWLQNLSPGAFSCAFQQKTLSIHVDRLVKPSKAGHADLLTPLINRLSPCPASPFR
QRPHSADTYMSRSLNPALDGLSHGLAAQDKRGMEGNMKSALSRSLVESNVHQLDDSPEKT
YPQGLEGPKTTRTPLTPGRDGGTACTERVEQPDSTEHIQEYYRQRLRVQQHLEQKQQQRQ
LYQQMLLEGGVKPLDGAQNNLTETFLTRSIQKLEEMNVAIDHHGAEATPLGQQCNGVVHE
GSTSKIQEPGVVQKAKPGSVRNTPSQGPLSQWLQHVSEPPLPASAAESIRAPGQDDSSSH
VTRCTTQEPGKAKTQFFKVSQLEDTQAVRAVAFHPSGLFYAVGSNSKTLRVCAYPDTLTT
STPDVIEQPVVRFRRNKHHKGSIYCVAWSCCGQLLATGSNDKYVKVLPFNADSCNATGPD
LEFSMHDGTIRDLAFMEGPESGGSILISAGAGDCNIYTTDCQRGQGLHALSGHTGHILTL
FTWGGWMITSGSQDKTVRFWDLRVPSCVRVVGTTLHGSGSAVVSVAVDPSGRLLATGQED
STCMLYDIRGGRIVQTYRPHSSDIRSVRFSPGAHHLLTGSYDNKIIISDLQGDLTKALPQ
TLAGEHWDKVIQCRWHPKDRTFLSSSADRTVVLWATNP
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagaggagaaaatcaacatcaaggaagcagaagtggtgaagctcgtcctcgac
ttcctcagctccaggaagcttcacatcagcatgttggcattggagaaggagagcagtgtc
atcaacggtctctactccgatgatatgctcttcctcaggcaactcattctggatggtcaa
tgggaggaggtgatgcagtttattcagcctttagaagggttggacaaatttgacaagaaa
aggttccgctatatcattctgaagcagaagtttcttgaggctttgtgtgtgaataatgcc
atgtctgccattgaagatcctcaaaatctggagcttaccatgcaggatgctgtcaggtgc
ctgcacaacctcgaggagttctgcccgtcgaaggacgactacggcaaactctgcctcctc
ctcacgctgcctcgactcacccaccatgctgagttcagggactggaacccgagtacggca
cgcgtccactgcttcgaggaagcctgcgtgatggttgctgagtttattccagctgacagg
aagttgagcgaggcgggcttccgagcgagtgggaaccgtcttttccatctgctcatcaaa
ggaatcctttatgagtgctgcgttgaattctgccagagcaaagccactggagaggcaata
actgagggtgaggtgttactcggggtagacttgctctgcggaaatggttgtgatgaagtg
gatctatcgctgctgtcctggcttcaaaacctttctcctggagcgttttcatgcgccttc
caacagaagacactcagcatccatgtcgaccgcctggtcaagcccagcaaggctggtcat
gccgacctcctcacccctctgatcaaccgcctgtccccctgcccggcctcacctttccgc
caaaggccgcactcagccgacacgtacatgtccaggtccctgaacccggctctggacgga
ctgtcccacggcttggctgctcaggacaagagaggcatggagggtaacatgaaatcagct
ctcagtcgaagcctggtggagagtaatgttcatcaactggatgattcccctgagaaaacg
tatccacaaggtttggaaggtcctaagacaactcgcactcctctgactcctggtagagat
ggtggaacagcatgcacagaaagagttgagcagcctgactccacggagcacattcaggag
tactacaggcagcgtctgcgtgtgcagcaacatctggaacagaagcaacagcagagacag
ctttaccagcagatgctgcttgaagggggtgtaaagccactcgacggagcacaaaacaac
ctcactgaaaccttcctcactcgatcgattcagaaactggaggagatgaatgttgccatt
gaccaccatggagctgaggcgacccctcttggccagcagtgtaatggcgtggtacatgag
ggcagcacatccaaaatccaagagccgggggtggtacaaaaggcaaagcctggtagtgta
cgtaacaccccctcacaagggcctttgagtcaatggctgcaacacgtcagtgagccacca
cttcctgcaagtgcagctgaaagcattagagccccagggcaagatgattccagcagccat
gtgacacgttgcacaacccaggagcctggaaaggccaaaacccaatttttcaaagtgagc
cagcttgaagacacgcaggcggtacgagctgtggccttccatccttctggattgttttat
gctgttggttccaactcgaaaactctccgagtttgcgcctaccctgacaccctaacaacc
agcactccggatgtcatcgagcagccggtggtgcgcttcagaaggaataaacaccacaaa
ggttccatctactgtgtcgcatggagctgctgtggacagctcttggccactggctccaat
gacaaatatgtcaaagttctgcctttcaatgctgacagctgcaatgcgacaggtcctgat
ctggaattcagcatgcatgacggaaccatcagggacttggccttcatggagggtcctgag
agtggagggtccatcttgattagcgctggagccggagactgcaacatctacaccactgac
tgccagagaggacaaggccttcacgcgttgagtggacacactggccacattttgactcta
ttcacatggggaggatggatgatcacttctggatcccaggacaagacagtccggttctgg
gacctgcgggttccaagttgtgtgcgtgttgtgggtaccaccctgcatggctcagggagt
gcggtagtttcagtggcagtggacccgagcggccgcctgctcgccactggccaggaggac
agcacctgcatgctctatgacatcagaggaggccgcatagtccagacctaccggccccac
agcagtgatattcgttcagtacgcttctcacctggagcccatcaccttctcactggttcc
tatgacaacaaaatcatcatcagtgatctgcaaggtgacctaactaaagcactccctcag
acgctggcaggagaacactgggacaaggtgatccagtgtcgatggcatcccaaagaccga
accttcctctcttcctctgctgatcggaccgttgtactctgggctaccaatccctga
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