Syngnathus scovelli (Gulf pipefish): 125972495 Help Entry 125972495         CDS       T08785                                  Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism sscv  Syngnathus scovelli (Gulf pipefish) Brite KEGG Orthology (KO) [BR:sscv00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:sscv04515]     125972495 Cell adhesion molecules [BR:sscv04515]  Cadherins   Cadherin related    125972495 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_pro Cadherin_4 RET_CLD1 PepSY FAM176 CADH_Y-type_LIR LapA_dom TMEM154 PTP-NADK Stevor TMEM100 Motif Other DBs NCBI-GeneID:  125972495 NCBI-ProteinID:  XP_049582162 LinkDB All DBs Position 7:709147..764586 Genome browser AA seq 3285 aa AA seqDB search MKTAAKGAGKSTMDPLQGDGCWMRRIALTYAVLVLVSLHSPAVQGTLDLQLDEEQPAGTI VGDISAGLPPGVTAALYFISDHEGTGVSTDLDIDESTGIIKTAKVLDREQRDRYNFIAVT MTGVTVEVSIKVNDINDHGPTFPKKHATFRIPEQTAIGTRFPLDPAVDADGGHFTTQGYL IKDGNIGQAFTLETRRGSNGVLYLDLVVNAILDREKRSTYTLSLEGFDGGSPQRTDQMTL DITVQDINDNAPVFNQSRYHAIISENLQPGNSILQVFATDADEGENGVVTYEINRRQSDP DRYFVIDPHTGVITLNKPLDFEMRRVHELVVQAQDNATHPEVTNAFVTIHVRDYNDNQPT MTIIFLSEDGSPQISEGAQPGQYVARISVTDPDYGEYANVNVSLEGGDGKFGLTTKDNII YLICVDQILDREERDVYDLRVMATDSGDPPLRAESSFTIEVTDVNDNPPLFDQAVYRQVI PEVVFPGTFVLQVTARDKDQGPNGDISYRILSDKGAFADWFSIDAVTGIITTLSQLDYEK NPNPSITVVATDEGRPPLSSTAVVNIVLQDINDNEPVFESNFYNVSVGEDAAPGTCILEV MARDADGGSFGSISYSLSSGQNSAANSQFTIDKETGVICTRAALDRDQGQSSYDFAVTAV DGGGLSTQAYVRVDLVDVNDNRPTFYPLSYAVSLSSQSAPGTSVARVIAYDPDSGENGRI TYKTASGGSSPYFTLNKDTGVISLSRSVHGKANSVIAMVISAQDGGGLAALEDAKVNISV AAGAVAPPVFEQAQYYFAVSEDVLQGTVVGSVQAKSKPGLPRDMAYVISSGDPTGYFTVD GDTGTLRTRLSLDHEARPALDLEVQVRTGNPPAFGQTRVHIAIQDVNDNPPVFLPSSSES LLVPEQTEMGTAVYRVQAEDRDSGANGQLSFDLSSPSGVQRAFSIERSSGEIRLVGPLDY ESVPRYDLRVIAKDGGVPQLSATFMLVVHVQAENDQGPMFDTLSYRVELKEGTPINTRFL RVRALNRETSGSGYFSPLSYHLRPDGDAAGFGIASDSGWLFVKSALDREVKDMYLLTVLA SAGHGQLKKTGSATVRISVTDENDNPPRLAQPRVFMAVRENLPAGTGFGRVLATDRDSAS NGRLSYRLLHPDRNFQINSHTGEMSTRASLDREQQSSYQLAVVVQDGGAPSRSATGTVFI SVLDDNDNVPTFVHSQPGKKLTFQVSEAQSSGVLLGTIQAKDPDEGENGTVLYSLAGPRA ERFFLNANTGELHSSSPLSHSERPEYVLTVTASDRGLPPRSASCSIAVQVLSTSRASPKS NSHSMAFNSVEEEAKPGSVVGSVRLHDGESPAEGQVTYMVVGGTDRDGTFVVDRSTGDVY LARPLDYEQDAHYALKIEVDDFSQAPPVSTLVHLDINVKDSNDHAPQFPEDPVTVVISES VRPGTSVFTFQAADKDGSGPNSDLSYSILRQFPDIPGLLTLDPSTGVLTLNRELDHEVYP GLILVVKATDSAPDASERQWSSVTARIYVTDENDNPPVFVSPAAVSVMEDQPVGFVALYV MARDADRGENGRVTYAIQSGNTGGTFSLNPNTGSLSIFKALDREEQEVFNLTIVAEDHGA QRRSSSQLLRVFVVDVNDQVPRFEESHYEAQISENQPRGSSVLTVSAFDLDQGSNGKVTY GCVTAEGFTINPATGVITSTQPLDRELREYYTVTVYAKDGGLPPNYAKATVRVRVLDEND NAPVFGRQYYSIEVPENMEPRLLFTLRATDQDAGDGGVISYRITAGDPAGDFHLDRQTGA LSTSGSLDREMRAVYTLTVVARDQGHPPRSSTATVEVSVSDINDHSPRFSSSAYTADVSE DVPIGSLVLDVKATDLDEGPNGQVVYFLSRGSESMFIVDQNTGRVITAALLDRERTASYT FEVCATDSSPSDPRNATARVTVHIQDVNDNAPFFIQDPLILNISAGSLSNQRILATMRAE DKDFGANGSVFYRFANPVRGFTINSLTGAIQATEKLQALTQSQRTLIVQAMDQGNPAQSS LGVVIVYIKEQTYNGIRFSRTPQDVSLQENAARGTVVTQTQAQYPDGSQSGVSYSLFSGN PLQSFGINTVTGEIWVQKSEGLDYEETPKLRLVVKAETASSSSYVAVNLILQDVNDNLPR FQLQNYVAYIREAQGHDFPIIQVAANDLDQGQNGQVTYSIRSSSMSGLFKIDPLTGSIST TAIMDREIWTQTKLVVTATDRGTPRLAGSATLTVIIVDLNDNSPMIPLPREIRVPEDTLI GTVISQVTGNDVDTGPALSYTLYLDGDSKGMFGIHCYGGGVSLTKALDYEERTWYTLTIR SSDSKHQSEANLTVLVEDVNDNTPVFTQDLYQVTVSEHLPEGSALVTVTATDSDSGDNGK ITYRVMSSTRGVFSIDPSNGTLFVKQKTKFDFENPSILVVVEARDQGSPSLSSLATIQVQ VSDINDNTPVFHQSEYRASVSEDELPGSTVLTLEAADGDLSRDNCGFDFAIASGNSGNAF QIESSVRFLEGKGFQTIGSLILVEELDFEAVSSYNLTVVVSDRGIPQRSSCVPILISVMD VNDNPPAFGRGEYSAVLSESTAAGTEVLHLSATDPDSAPNGEVQYSISSGDKTGLFQVDQ WTGALKLQRPLGSESQLSHMIVVQATDGFGHYAFAPVSIDVKDINDHWPFFPLSQVTASI RENQPKNALVTMLHAIDHDRGVFGKLRYYMLDDSQDGREAFFINQTSGEVRTRSTFDFER VNSFNFKVAAMDAGNYSATVTVQIYVSGEDEYDPVFTSPEFSFQVPEDAKKGQIIGRVQA RDEDGGLDGVVLYSLSASSPYFEVNKSSGAISLKMDSYGRHVSRSKREVRLMTLDLLAHS PLETSRTAATKVTVDVSHTSFGLATDINMLLISVIAVSLGIIVILCVIAVALFCVKLRRR RKEQKRHRRTKASATMLHKFEESKIAASEIIYHQALPGYVADQSSGSSSSGGPYTRGGSL DPSHSSGRGSAEAEAAEDDEIRMINEYPRVSSISSSMQERISARGPDSGIQQDADQLSDV SGEPSIDWFKGKKMGSLNGTLLAGQVPIYRDEGGGYAGMGRGLNVSHHKDYIFPEDGKPT VDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLASVFTEIARLKDETAPPHPRRSFHRK SKAESRIDPPPLITSVAHPSAKTVAPKPAVGRTYPHLSTFRRSPLSSEGSICSVAMSPSF SPSLSPLAARSPAVTPFSVSQGPSASVISATEHNLEQIDEAELRI NT seq 9858 nt NT seq  +upstreamnt  +downstreamnt atgaagacagctgccaagggtgcggggaagtccacaatggatcctttgcaaggtgacggc tgctggatgagaaggattgcgctgacgtacgccgtcctggttcttgtttcgcttcattcg ccggcggttcagggcaccctggatctacagttggacgaggaacaaccagcgggaaccatc gtcggtgacatcagcgccgggttgcctcccggcgtcacggcggcgctctatttcatttcc gaccacgagggcaccggcgtgagcaccgatttggacattgacgagagcacgggaatcatt aagactgccaaagttctggaccgagaacagagggacaggtacaacttcatcgctgtaacc atgacaggtgtgactgtggaggtaagcatcaaggtcaatgacatcaatgaccacggcccg acgtttcccaagaaacacgctaccttccgaatccccgagcagacggctatcggcactcgc tttcctctggacccagcggttgatgcggacggaggtcatttcaccactcagggttacctc atcaaagatggaaacattggccaggcgttcactttggagaccaggaggggaagcaacgga gttctgtatctggacttggtggtcaatgccatcttggacagggagaaaaggtcgacctat actttgtccttggagggcttcgacgggggttcccctcaaagaaccgatcaaatgacatta gatatcaccgtccaggatatcaacgacaacgctcccgtgtttaatcagagccgctaccac gctatcatatccgaaaacctgcagccgggaaacagcatcttgcaggtgtttgcgacggac gccgacgagggagaaaacggcgtggtgacgtacgagatcaacaggcgacaaagcgacccc gatcgttactttgttatcgacccccacacgggcgtcatcaccctcaacaagccgctggac tttgagatgcggcgagtccacgaactggtggtgcaagcccaagacaatgccacgcacccg gaggtgaccaacgcctttgtcaccatccacgtcagagactacaacgacaaccagcccacc atgaccatcatttttctcagcgaggacggctcgcctcaaatctcagagggcgcgcagccg ggacagtacgtggctcgaatttcggtcaccgacccggactacggcgagtacgccaacgtc aacgtgtcgctggagggcggagacggcaaattcggactgaccaccaaagacaatatcatc tacctgatttgcgtggatcagattctcgatcgcgaggagagagacgtttacgacctgagg gtgatggcgaccgactctggcgaccctcctctcagagccgaatcttccttcaccatcgag gtgaccgacgtcaacgacaacccgccgctgttcgaccaagccgtgtatcggcaagttatc ccggaggtggtgtttcccggcactttcgtcttacaagtgaccgccagagacaaagaccag ggacccaatggggacattagctaccgcatcctttcggataaaggcgcctttgccgactgg ttcagcatagacgccgttacggggattatcaccactctgtcccagctggattacgaaaag aaccccaatcccagcataaccgtcgtggccacagacgaagggagaccgccgctgtcgtct accgccgtggtcaacatcgtacttcaggatattaacgacaacgagcccgtctttgagagc aacttctacaacgtctccgtcggcgaggacgcggctccgggaacgtgcatcttggaggtg atggccagagatgcggacggtggttcctttggctccatcagctactcgctgagttcgggc cagaacagcgccgccaactcccagttcaccatcgacaaagagaccggcgtcatctgcact cgtgcggcgctggaccgggaccaaggccagagcagctacgactttgcagttactgcggtg gacggggggggcctgagcacgcaggcctacgtgagggtcgacctggtggacgtcaacgat aaccggcccaccttttacccgctgagctacgccgtcagtctcagctcgcagagcgctccc gggacctcggtggcccgagtcatcgcctacgatccagactcgggggaaaatggccggatt acgtacaaaactgcgtcaggggggtcttccccttacttcaccctcaacaaagacacgggt gtgatctctctttcccgctccgtccacggcaaggccaactcggtcattgcgatggtgatc tcagcccaggacggcggaggcctggccgccctggaggacgccaaggtcaacatcagcgtg gcggcgggtgcggtggcgccccctgtgtttgaacaagctcagtattactttgcagtttcc gaggatgtcttgcagggaaccgtcgtgggtagcgtccaagccaaaagtaagccaggcctc ccccgagatatggcctacgtcatcagctccggggaccccacgggatactttacggtggat ggcgacaccggaaccctacggacccgtctgtccctggatcacgaagcccggccggcgctc gacttggaagtgcaagtccgcaccgggaacccgccggcttttggtcagacccgcgtccac atcgccatccaggacgtcaacgacaacccgccggtgttccttccctcgtcctccgagtcg ctgctcgtgccggagcaaacggaaatggggacggcggtgtaccgcgtgcaggccgaggac agagactccggcgcaaacggccaactgtcttttgatctgtcttctccgagcggcgtccag agagctttcagcatcgaacgcagcagcggggagatccgactggtagggcccctggactat gagagcgtcccccgctacgacctccgagtaattgccaaagacggcggagtgcctcagctt agcgctactttcatgctcgtggtccacgtccaagcggaaaatgaccagggacccatgttt gacacgctcagctaccgggtggagctcaaagaaggcactcccatcaatacgcgcttcctt cgagtccgggcccttaatagagaaacgtcgggttccggatacttcagtcctctttcgtat cacctgcggccggacggcgacgccgccggcttcggcatcgcttcggacagcggctggctc ttcgtgaagagcgccctggaccgcgaagtcaaggacatgtatcttctcaccgtgctggcc agcgcgggtcacggacagctgaagaagaccggcagcgccaccgtcaggatatcggtgacg gacgagaacgacaacccgcctcgactggcgcagcccagagtcttcatggccgtgagggaa aatctgccggcggggacgggcttcggtcgcgtgctggccaccgaccgtgacagcgcctcc aacggacgcctcagctatcgtctgctgcaccccgaccgcaacttccagatcaactcgcac acaggtgaaatgagcaccagggccagtctggacagggagcagcagtccagctaccagctg gcggtggtcgtgcaggacggaggcgcgccttcccgcagcgccaccggtaccgtctttata agtgtgctggatgacaatgacaacgtcccgacgttcgtccacagccagcccgggaaaaaa ctcaccttccaggtgtcggaggctcagtcttcaggagttctgctgggcaccatacaggcc aaagacccggatgaaggagagaacggcaccgtactttactccttggcaggtccgagggcc gagcgcttcttcctgaacgccaacacgggcgagctgcactcgtcgtcgcccctcagccac tcggagcggcccgagtacgtcttgacggtgacggcaagcgaccgaggactgccgcctcgc agcgcctcctgctccatcgccgtccaggttctcagcaccagcagagcatctccaaagagc aactcgcattccatggctttcaactctgtggaggaagaagccaagccgggttcagtcgtc ggttccgtccgccttcacgatggagaaagcccggcggagggccaggttacctacatggtg gtggggggcaccgacagggacgggacttttgtggtggaccgctcgaccggagacgtctac ctggcccggcctctggactacgagcaggacgcgcactacgccttgaaaatcgaggtggac gacttctctcaggctccgcccgtcagcaccctggtccacctggacattaacgtcaaggac agcaatgaccacgcccctcagttccccgaagaccccgtcacggtggtcatttcggagagc gtcaggccggggacttctgtcttcacgttccaggccgcagacaaggacggcagcgggccc aatagtgacctgagctactccatcctccggcagtttccggacatccccggtctgctcacc ctggacccttccaccggggttcttactttaaaccgagagctggaccacgaggtctacccc ggtctgatcttggtggtaaaagcgacggactcggccccggacgcgagcgagaggcagtgg agctcggtgacggcgaggatttacgtcaccgacgagaacgacaacccgccggtgttcgtc tcgcccgcggcggtgagcgtgatggaggaccagcccgtgggcttcgtggcgctctacgtc atggccagggatgcggaccgaggggagaacggcagggtgacctacgccatccagtcgggc aacacgggcggaacctttagcctcaaccccaacaccggttccttgtctatcttcaaagcg ctggaccgcgaggagcaggaagtcttcaacctgaccatcgtggccgaagaccacggcgcc caacgccgctcgtccagccagctgctacgtgtctttgtggtggacgtcaatgaccaagtc cctcgcttcgaggagagtcactatgaggcgcagatctccgagaaccaaccgcgaggctcc tccgtgttgaccgtgtcagcgttcgacctggaccaaggatccaacgggaaggtgacgtac ggttgcgtcacagcggaaggttttactatcaacccggcgaccggcgtcatcaccagcact cagccgctggacagagagcttcgggagtactacaccgtcacagtttatgcaaaagacgga ggccttcccccgaactacgccaaagccaccgtgagggtccgcgtgctggacgagaacgac aacgcccccgtctttggacggcagtattacagcatcgaggtgccggagaacatggagccc cggctccttttcacgctgcgagccaccgaccaggatgcgggagatggcggcgtgataagc tacagaattacagctggggacccagcaggagatttccacctggacagacaaactggcgcc ctgtccacctccggctctctggatcgggaaatgagagccgtatacaccctgacggtggtc gcccgggaccagggccacccgccccgcagcagcaccgccacggtggaggtgagcgtcagc gacataaacgaccacagcccccggtttagcagcagcgcctacacggccgacgtgtccgaa gacgtgcccatcggctctttggtcctggacgtgaaagccactgatctggacgagggcccc aacggccaggttgtgtacttcctgagccggggctccgagagcatgttcatcgtagaccag aacacgggccgtgtcatcacggcggcgcttctggatcgagagcggacggcctcttacacc tttgaggtgtgcgccaccgattcgtcaccttccgaccctcgcaacgccaccgcccgggtc accgtccacatccaggatgtcaacgacaacgcccccttcttcattcaggacccgctcatt ttgaacatttccgccggcagcctgtcgaaccaaagaatactggccaccatgagggccgag gacaaagactttggggccaacgggtcggtgttttatcgctttgccaacccggtgaggggc ttcaccatcaactcgctgacaggcgccattcaagccaccgagaagctgcaggctctgacc caaagccagaggactttgatcgtgcaggccatggatcagggcaacccggctcagtcgtcc ttgggggtggtcattgtttatatcaaggagcagacgtacaacgggattcgcttctcacgc acgccgcaagacgtcagtctgcaggagaatgctgcaagaggcacagtggtaacgcagacc caagcccagtacccagacggctctcaaagtggggtcagctacagtcttttcagcggaaac cccttgcagtctttcggaatcaacacggttaccggcgaaatatgggtccagaaatccgaa gggctggactacgaggagaccccgaaactccgcctcgtggtgaaagccgagacggcgtcc tccagctcctacgtggcggtgaacttaatcctgcaggacgtcaatgacaatttgcctcgc ttccagctgcagaactacgtggcctatatccgagaggcgcagggtcacgattttcccatt atccaggttgcggcaaacgacctggaccagggtcaaaatggccaggtgacatactccatt aggtcgtcatctatgagcggtctgttcaagatcgacccgctgactggcagcatcagcacc acggccatcatggacagagaaatctggacgcaaacaaagcttgtcgtcacggcgacagac cgtggaaccccgcgattggctggctccgccactctcaccgtgattatcgtcgatctcaat gacaacagtcccatgattcctctgcctagggagatccgagtgcctgaagacaccctgatt ggcacagttatcagtcaagtgacaggaaatgatgtggataccggcccggccctttcctac accctctacctggatggcgacagcaagggcatgtttggaatccactgctatggcggcggc gtgtctctgacaaaagcactggactacgaagagaggacatggtacacgctgaccatccgc tcgtcagactcaaagcatcaaagcgaagccaatctgaccgtgctggtggaagacgtcaac gacaacacacccgtcttcacccaggatttgtatcaggtgacggtatcagagcatctccca gaaggcagtgctctcgtcaccgtgacagccaccgactcggactccggggacaacggaaag atcacctaccgagtcatgtcgtccacaaggggcgtcttctccattgacccgagcaacgga actctgtttgtcaagcaaaagaccaaatttgactttgaaaatccctccatcctcgtggtt gtggaagctcgagaccagggcagtccctccctctcgtcactggctaccatccaagtccag gtgtcggatatcaacgacaatactcctgtcttccatcagtccgagtacagagcgtccgta tctgaagacgagcttcccggctccacggttctgaccttagaggcagccgacggagacttg tcgcgtgacaactgtggttttgattttgccatcgccagtggcaactctggcaacgccttc caaattgagagcagcgtgcgcttcttggaaggcaaaggcttccagacgatcggaagcctc atactggtggaagagctggatttcgaagccgtgtccagttacaacctgaccgtcgtggtg tcggatcgggggatcccccagcgcagctcctgcgtgccgatcctaatcagcgtgatggac gtcaacgacaacccgccggcgttcggccgaggagagtacagcgcggtgctgagcgagagt accgccgcaggaacggaagtgctgcatctgtctgccactgatccggactctgctcccaat ggggaggtgcagtactccatcagctctggagacaagacgggccttttccaggtggaccaa tggaccggggccttgaagctacagcgacctctgggcagtgagagccagttgtcccacatg attgttgtccaagctacggatggctttggacactatgcctttgccccagtcagcattgat gtgaaggacatcaatgaccactggcctttctttccactcagtcaagtaacggctagtatc agggagaatcagcccaaaaatgccttagtgaccatgctgcacgccatcgaccacgacaga ggggtttttggaaagttgcgatactacatgctggacgactctcaagatggaagagaagcc tttttcattaaccaaacatcaggagaagtgcggacccgctcgacgtttgactttgagaga gtgaactccttcaattttaaggttgcggccatggatgctggcaactattctgccaccgtc acggtgcagatttatgtctctggggaggatgaatatgatcctgtttttacctccccggag ttctcctttcaagtgcccgaagacgcgaagaaaggtcagatcatcggcagagtgcaagcc agagatgaagacggaggcctggacggtgttgtcctgtattctctgtcagccagttcacct tattttgaagtcaacaaatcatccggcgccatctccctaaagatggacagctacggcaga cacgtgagccgctccaaacgagaagtgcgcctgatgacgctcgacctgttagcccacagc cccctggagacgtcccgcacggcggcgaccaaagtgaccgtcgacgtgagccacacctct ttcggacttgccacagacatcaacatgctgctaataagcgtcatcgccgtgtctctcgga ataatagtcatactgtgcgtcattgccgtggcgctgttctgcgtcaaactgaggcgccgg aggaaagaacaaaagagacacagacgaaccaaggcgtcggccaccatgctgcacaaattt gaggaaagcaaaatagccgcaagtgagattatttatcaccaggcccttcccgggtatgtt gctgatcagagcagcggcagcagcagcagcggggggccgtacactcgcgggggatccctg gacccctcgcactccagcggccgaggctccgcggaggccgaggcggcggaggacgacgag atcaggatgataaacgaataccctcgtgtgtccagcatctcctcctccatgcaggagcgt atctccgctcggggtcccgactccgggatccagcaggacgcggaccagttgtcagatgtg tctggcgagccctctatcgattggttcaaagggaagaagatgggcagcctcaacggtact ctgctagctgggcaggtgccgatctaccgagacgagggtggtgggtacgcgggcatgggg cggggcctcaacgtctcccaccacaaagattatatcttcccggaggacggaaagccaacc gtggacggctccttgacggccatcgtggccagtgacgaggaactgaggggcagctacaac tgggactaccttctcaactggtgcccccagttccaacctctagccagcgttttcaccgag atagcgcgattaaaggatgaaacggctccccctcacccccgccgctccttccaccgcaaa agcaaagcggagtccagaatcgacccgcctccgcttatcacctccgtggcgcatcctagc gcaaaaactgtagcgcccaagccggctgtggggaggacgtacccccacctgtccactttc cggaggtctcccctgagcagcgagggatccatctgctcggtggctatgtcgcccagtttc tccccgtccctgtcgccactggcggcgcgctctccggccgtcacgcccttcagcgtctcc cagggcccgtcggcatccgtcatcagcgctacggaacacaatctggagcaaattgacgag gccgaactgaggatttga

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