Syngnathus scovelli (Gulf pipefish): 125972500
Help
Entry
125972500 CDS
T08785
Symbol
zmp:0000000529
Name
(RefSeq) WD repeat-containing protein 20
KO
K24731
dystrophia myotonica WD repeat-containing protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
125972500 (zmp:0000000529)
Domain-containing proteins not elsewhere classified [BR:
sscv04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
125972500 (zmp:0000000529)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WD40_Prp19
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_EML
WDR55
PD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
125972500
NCBI-ProteinID:
XP_049582179
LinkDB
All DBs
Position
7:complement(8838925..8844077)
Genome browser
AA seq
672 aa
AA seq
DB search
MAGDGGALKDINEIKSQFRTREGFYKLLTLSDSQQRSGLPRGSSAGATLGPAAGAGPIPS
AGVGLLQGPGAAAAAAAVASSTNAAANSSPAGFLPPVRVSMVKLQPEDPGEESERVCFNI
GRELYFYTYTNIKKAVDLSKPIDKRIYKGTQPTCHDFNQYSASADSVALIVGFSAGQVQY
LDPIKKETSKLFNEERLIDKSKVTCLKWLPKSENLFLASHASGHLYLYNVEHSCGTAAPQ
YSLLRQGEGFAVYACKTKTPRNPLLRWAVGEGGLNEFSFSPDGVHVACVGQDGCLRVFHF
DSMELQGVMRSYFGGLLCVSWSPDGKYLATGGEDDLVTVWSFAESRVVARGHGHKSWVNV
VAFDPFTTSLEDEEPMELSGSEEDLHQGGVPNNTAPHFGRVRTSSTLSRLSRHSSKGGGS
AAVTYRFGSVGQDTQFCLWDLTDDVLYPRLPLSRAFTNTFGPTLPTSGGGGVEGHHHPPV
VGTSNPPTLPLPLPRSLSRSNSLPHPAVANTSKSQGTTEGGTGVTGSGTGTVGSGPGNTA
PFSIGRFATLSLQERKSDKSVVGGGVEKEHKRYHSLGNISKSNDKINVAPRGSGRLDAAK
VLGTTLCPRMHEVPLLEPLVCKKIAHERLTVLVFMDDCIITACQEGLICTWARPGKANLT
AQNGNSPSGTVV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggccggagatggcggcgctctaaaggatatcaatgagattaagtcgcagttccggacc
agagagggcttctacaagctgctcaccctctccgactcacagcagcggagtgggctacca
aggggttcatccgccggagccacgctgggccccgcggctggagccggcccgattcccagc
gcaggggtcgggctgctgcaggggcccggagccgccgctgcagccgcagccgtcgcctcc
tcgacgaatgccgcagccaactcctccccggcgggttttctgccgcctgtgcgggtctcc
atggtcaagctccaacccgaagacccaggcgaggagtcggagcgggtgtgctttaatatc
ggcagggagctttatttctacacgtacactaatatcaagaaggcagtggacctgagcaag
cccatcgacaagaggatttacaagggcacgcagcccacatgtcatgacttcaaccaatac
tctgcttcggctgacagcgtggcactcatcgttggcttctcggctgggcaggtgcagtac
ttggaccccatcaagaaggagaccagcaagctcttcaatgaagagcgtcttatcgacaaa
tccaaggtgacgtgtctgaaatggctccccaagtctgagaacctgttcctggcctctcac
gccagcggccacctgtacctctacaacgtggagcactcgtgcggcacggctgccccgcag
tactcgcttctgcgccaaggcgagggctttgccgtgtacgcctgcaagaccaagacaccc
cgaaaccctcttctacgctgggccgtgggcgagggcggcctcaatgagttctctttctcg
cccgacggggtccacgtggcttgcgtgggccaggacggctgcctgcgagtctttcatttt
gactccatggagctccagggtgtgatgaggagttatttcggaggcctgttgtgcgtctcg
tggagcccagatggcaagtacctggccacgggaggcgaggacgacctggtcactgtgtgg
tctttcgctgagagccgggtggttgcccgcgggcacggacacaaatcctgggtcaacgtg
gtggcatttgaccctttcaccacctccctggaggacgaggagcctatggaactcagtggg
agtgaggaggacctccaccagggtggggtgcccaacaacaccgccccacactttgggcgg
gtgcgcaccagcagcaccttgtcacggctctctcggcacagctccaagggcggcggctca
gcagccgtcacctaccgatttggatccgtcgggcaggacacgcagttttgcctgtgggac
ctcacagatgacgttctataccctcgcctgccgctttcccgcgcttttaccaatactttt
ggacccacattgcccacctctgggggtggtggagtggagggccaccaccacccgcctgtt
gttggcacttccaaccctcctacgctgcctctcccgctccctcggtccctctcccgttcc
aattcacttccccaccctgcagtcgcaaacacctccaaaagccagggcaccacagagggc
ggtactggggtaacaggaagcggcaccggtacggtgggtagcggcccaggtaacacggcg
ccgttcagcatcggtcgctttgccacgctttcccttcaggagcgcaagtcggacaagtca
gtggtggggggcggggtggagaaagaacacaagcgctaccacagcctgggtaatatcagc
aagagtaacgataagatcaacgtggcaccgcggggtagcggtcgccttgacgccgccaag
gtgctgggcaccacgctgtgcccgcgcatgcacgaggtgccactcctggagccgctggta
tgcaagaagatcgcccacgagagactcaccgtgctcgtctttatggacgactgcatcatc
acggcgtgccaggaggggctcatctgcacctgggccaggcctggcaaggcgaacttaaca
gcacagaatggaaactctccaagtggcacggtggtatag
DBGET
integrated database retrieval system