Syngnathus scovelli (Gulf pipefish): 125972524
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Entry
125972524 CDS
T08785
Symbol
trim59
Name
(RefSeq) tripartite motif-containing protein 59
KO
K12028
tripartite motif-containing protein 59
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125972524 (trim59)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
125972524 (trim59)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-RING_5
zf-C3HC4_3
SR_plectin_7
ATPTG10
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
125972524
NCBI-ProteinID:
XP_049582229
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All DBs
Position
7:1839214..1842237
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AA seq
424 aa
AA seq
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MDNLEEDLTCSVCYSLFSDPRVLPCSHTFCRGCLDSLLHASHNYSIWRPLRQPLKCPNCR
SMVELPMAGVDALPANVSLRAIIEKYQGDSGPRPPMCPDHPRQPLNMYCVQDRKLICGLC
LTVGQHQSHTIDDLQAAFAREKRTPSLLLARLSEHKWSQVCELSEQLEQAKARCEAVLWQ
DRQEVTEFFHALEMVLLRKRQAYLEVLDKSLDEVSRAYDPLIHRVKELQEEQLDLVSFAA
SIEEEDSPLVFLEKVHMFRERVANFTGASLPSALNLSVTPRAADYLRQHWAAVTLGSLDE
APIPKVCCCTQCSGAAAEVHGGPKRDSFWPRVKLLLPLLALLLVVASLCWLGVFQSSRDL
MGELFMPVWDWAGMEFTVVQELVVKWSCHIFAMSEIFSQELAAFLTSLMSWPDLGTAFCY
VAKC
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggacaacctggaggaagacctgacgtgctcggtgtgttactcgctcttctctgaccca
cgggtgctgccctgctcgcacaccttctgccggggctgcctggacagcctgctccacgcc
tcgcacaactattccatctggcgcccgctgcgccagccgctcaagtgccccaactgccgc
agcatggtggagctgcccatggcgggcgtggacgcgctgcctgccaacgtgtccttgcgc
gccattatcgagaagtaccaaggggacagcgggcccagaccccctatgtgtccagaccac
ccgaggcagcccctcaatatgtactgtgtccaagaccgtaagctcatctgcggcctgtgt
ctgactgtgggccagcaccagagccacaccatcgacgacctgcaagcggcgttcgccaga
gaaaagcggactccttcactccttctggcacggctctctgagcacaaatggtcacaggta
tgtgagctgagcgagcagctggagcaggcgaaagcccgctgcgaggctgtgctctggcag
gacagacaagaagtcacggagtttttccacgcgctggagatggtgctgctccggaagcga
caagcctacctggaggttctggacaaaagcttggatgaagtgtcacgggcctatgaccca
ctcatccacagagtcaaggaactacaggaagagcagctggacctggtctcctttgcggcg
tccattgaggaggaggactctcctttggtcttcttggagaaggttcacatgttcagggag
cgagtggccaacttcaccggcgccagtctgccgtccgccctcaacctctcggtcacaccc
cgagccgccgactacctgcgtcagcactgggctgccgtcactcttggtagtctggacgag
gcgccgatccccaaggtttgctgctgcacgcaatgcagcggggcggcagccgaggttcat
ggcggaccgaagcgggactccttctggccacgagtcaaactgcttttgccgttgttggca
cttttgctcgtggtggcatcactgtgctggctcggcgtttttcagtcaagccgagacctg
atgggagagctcttcatgcccgtctgggactgggcaggaatggaattcactgtggtacag
gaacttgtagtaaaatggagctgtcacatttttgcaatgtcagaaatcttctcacaggag
ttggctgccttcttaacaagtctgatgtcatggcctgacctgggaaccgctttctgttat
gtcgcaaaatgctaa
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