Syngnathus scovelli (Gulf pipefish): 125972588
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Entry
125972588 CDS
T08785
Name
(RefSeq) high affinity cationic amino acid transporter 1-like isoform X1
KO
K13863
solute carrier family 7 (cationic amino acid transporter), member 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125972588
Transporters [BR:
sscv02000
]
Solute carrier family (SLC)
SLC7: Cationic amino acid transporter/glycoprotein-associated
125972588
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Gene cluster
GFIT
Motif
Pfam:
AA_permease_2
AA_permease
Phage_holin_2
Trep_Strep
VirB8
DUF4131
DUF2157
Motif
Other DBs
NCBI-GeneID:
125972588
NCBI-ProteinID:
XP_049582312
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Position
7:complement(532916..536048)
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AA seq
630 aa
AA seq
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MILEALKRIGRQLVRVKVVDSSSEETRLSRCLNTFDLVALGVGSTLGAGVYVVAGNVAKE
SSGPAIVLSFLIAAVASILAGLCYAEFGARVPKTGSAYLYSYVAAGELLAFITGWNLLMS
YAIGTSSVAKTWSATFDTLIGGKIGRWSKSNLPMNLPGVLSEYADVFSVCLIFVLTGLLG
FGAKESALVGKIFTSINILVLITVMVSGMIKGDGKNWKVDPEEILSAAAMASSPNATNNS
SLKESLGAGGFMPFGWTGVFSGAATCFYAFIGFECIATSGEEVKNPQKAVPIGIVSSLLI
CLLMYVGVSTALTLLMPYYLLDAQNPLPVAFTHVGWPFATNAVAAGSLCALSTSLLGAMF
PMPRVIWAMAEDGLLFKCLSRINGRTKTPLIATIVSGVVSAVMAMLFDLKDLVDLMSIGA
LLAYTLVAACLLVLRYKPDRSAPYETDVGEQEAESEGDGDARVKKDLCGTVGWLVLHPDK
EPTPRSGFTVTVCTSIIVVLAFLFSAVAVTAGMRASWRSILLGAIFLACVGVTAVLWRQP
QNKSRPTFKVCSSTSATAFVTARKQNGTRRPNADWTAAETSCDFPANAAADILFEDTCQN
TALWSCPICCTHLHLQNHFYLNSRPDFSST
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgattctggaagcccttaagcgcatcgggaggcagctggtgcgcgtcaaggtggtggac
tccagcagcgaagaaacccgcctgtcgcgctgcctcaacaccttcgacctggtggcgctg
ggcgtgggcagcacgctgggcgccggcgtctacgtggtggccggcaacgtggccaaagaa
agttcgggacccgccatcgtcctgtccttcctcattgcggcggtggcgtccatcctggcc
ggcctgtgctacgccgaatttggcgcccgcgtgcccaaaacgggctcggcgtacctttac
agttatgtggcggccggagagttgctggccttcatcaccggatggaacctcctcatgtcg
tatgccatcggtacttcgagcgtggccaaaacgtggagcgccactttcgacacgctcatc
ggaggcaaaatcgggaggtggagcaaaagcaacttgcccatgaacttgcctggcgtcctg
tcagaatacgccgacgtcttttcagtttgtctcatcttcgttttgacaggcctgctcggc
tttggcgcgaaggagtctgcgctggtgggcaaaattttcaccagcatcaacatcttggtt
ctcataaccgtaatggtcagcgggatgatcaaaggggatggcaaaaactggaaggtggac
ccggaggagatcctgagcgccgccgctatggcgtcctcacctaatgcaacaaataattcg
tctttgaaggaaagtctgggcgcagggggcttcatgcctttcggctggacgggggtcttc
tccggggccgccacttgcttctacgccttcattggctttgaatgtatcgccacttcaggc
gaggaggtgaagaacccgcagaaggccgtccccatcggcatcgtgagctcgctgctcatc
tgcctgctgatgtacgtgggcgtgtccaccgccctcaccctcttgatgccgtactacctc
ctggacgcgcagaacccgctgccggtggccttcacgcacgtgggctggccctttgcaacc
aacgccgtggctgccggctctctctgcgcgctctccacaagtttactgggcgccatgttc
cccatgcccagagtgatttgggccatggcagaggacggcctgctcttcaaatgtttgagc
agaatcaacggtcgcaccaaaacgcctctcatcgcgaccatcgtgtccggcgtcgtctcg
gccgtgatggccatgttgttcgacttgaaggatctggtggacctgatgtccatcggcgct
ctgctggcttacacgctggtggccgcgtgcctgctggtgctcaggtacaagcctgacagg
agcgccccctacgagacggacgttggcgagcaggaggcggagagcgagggcgacggcgac
gcccgggttaagaaagatctctgcggcaccgtcgggtggctggtgttacacccggataaa
gaacccactcctcgctccgggttcaccgtcaccgtttgcaccagcatcatcgtggttttg
gccttcctcttcagcgccgtggcggtgacagcaggcatgcgagcctcgtggcgctccatc
ctcctgggcgccatcttcctggcgtgcgtgggcgtcacggctgtgctgtggaggcagccg
caaaacaagagcaggcccaccttcaaagtttgctcatctacttctgctacggcattcgta
acagcgcgcaagcagaatggaacaaggcgcccgaatgcagactggacggccgcggagacg
agttgtgattttccagctaacgcggcagcagacatactttttgaagacacttgccaaaac
acagcattgtggagctgccccatctgttgtacccatttacacttacagaatcacttttat
ttgaattctcgacctgatttctcttctacgtga
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