Syngnathus scovelli (Gulf pipefish): 125972652
Help
Entry
125972652 CDS
T08785
Symbol
palld
Name
(RefSeq) palladin isoform X2
KO
K22029
palladin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125972652 (palld)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125972652 (palld)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
C2-set_2
Motif
Other DBs
NCBI-GeneID:
125972652
NCBI-ProteinID:
XP_049582444
LinkDB
All DBs
Position
10:9356354..9379161
Genome browser
AA seq
1360 aa
AA seq
DB search
MQDGSWNQPLLPISVLLKDSVEGVAATLEGDAALSADLDTGDGDFADLTAFLSADEINRS
LDLAREAFEETVEDQHLDHQQTPSQDNQVVQEAKASSTDDTSPPLSQTDVSSSEKVGRLK
AGPPVYKQDKPRLLHESLEFNDRVSSASEFCSRAATFIEELSSIFKGSSQQEHGAEAESS
SPDSGYLSPGNQRPGPRGAQAVPAASCQTEETQQAGPPEGAPAAPERQHAGTAPSASGPL
SPPCFVQKLKSQEVAEGSPIRLECRVSGTPPPLIRWFCEGRELHNSPDIHILRDGDLHTL
VIAEAFEDDTGRYSCVASNSLGADNTSAEVYIEGASSSDSDGESSPSKSRSASSMPVLQK
KTTTMSLTIRSSSPKTPEVLPHRTTLVQSLSQPLPRTQSPVSSLYGGDGSGPPTFSKMLQ
DTQASEGQVVVLECRVRGAPPLQVKWYRQGEQILDSPDFRILQKKPRSAAESDEICTLVI
AEAFPEDGGLFCCTASNPYGSVNSSAQLTVTAGAEDSSSSNGMSGDSSALDGVSFPPPPP
PTEISLLELPPKMPPQEVALWRPEAEGRPEEMSGMPNGQPTSPPFPSAVPAPPPPPPPRS
DHSAIRVPSDSPPNPGKLSPAPPLPTKPKPKLNASQLKQLQEQILLEQQEAALWQQHNQE
VPPPPQEALPSDSPSPPLPPPPSFQELESSTAMQASTFNYARPKQFIAAQNPGGVGGGYA
AHSSGSSGSSLSSPLSPPSSHKAFSKMTTPPFSKGMDSPGSPSFPPPPPPFFVSANLPSP
SGGAQEFPPPPPPPPPPPPPPPACVSPAFSDTSSPFSSVPPSPASSFLSSMLPATSTMPA
SPTVNALGLPKGNGTVKAFPKKSPATRTPRMASDSDIQGSKDAVIQDLERKLRFKEERVS
NGQQKLTYEEKMARRLLGADNVATVLKAQDSEEEPTTQEYKVSSFEQRLISEIEFRLERS
PVEESDDDVQHDEEHVPGNGAPPSFQNKLKHYKVFEGMPVTFTCKVHGDPKPKVYWFKDG
KQISKRSEHYRIGRTADGTCTLHTAAASLDDDGNYTIMAGNPEGRVSCTGRMMVQAVNQR
GRSQRSTPGHMRRPRSRSRDSGDENDNIQERHFRPHFLQAPGDLIVQEGRLCRMDCKVSG
LPTPDLVWQLNGQTIRPDSAHKMLVRENGVHSLVIEPVGARDAGIYTCIASNRAGQNSFN
LELIVAAKELHKPPSFTEKLQNTTVAEGHPVRLECRVSGVPYPQIFWKRENESLTHNTDR
ISMHQDNSGYLCMIIQPAYKEDAGWYTVSAKSEAGIVSSTARLDVLGQWQHPASARKAKP
LRPSSSRYAALTERGVDVKAAFFPDCSPLPPGSLVESDDL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgggagttggaaccagccactactcccaatctctgtgctgctcaaagactct
gtggaaggtgtagccgccaccctggagggggatgccgccctctcggctgacctggacact
ggcgacggggacttcgccgacctcactgccttcctgagcgccgatgagatcaaccgcagc
ctggacctggccagggaggcttttgaggaaacagtggaggatcagcacctggaccatcaa
caaaccccctcgcaggacaatcaagttgtccaggaagctaaagcctctagcacggatgac
accagcccacctcttagtcagactgatgtgtcctcatctgagaaggtgggccggctcaag
gcgggcccgccggtttacaagcaggataaacctcggctactccacgaaagcttggagttt
aacgaccgcgtgtcttcggcctcggagttctgcagccgcgccgcgaccttcattgaggag
ctgtcttccatctttaaaggttcctctcagcaagagcacggggcggaagcggagtcgtca
agcccggatagtggatatctgtcacctgggaaccagcggccgggccctcggggggctcaa
gccgtgcccgccgcctcttgccaaacagaggagacgcagcaagcgggccctccggaggga
gcgccggccgctcccgagcgccaacacgctgggacggccccgtccgcatcgggacctttg
tcaccgccgtgctttgtgcagaagttgaagagtcaggaggtggccgagggcagccccatt
cgtctggaatgcagagtcagcggaaccccgccgccactcatcaggtggttctgtgagggt
cgcgagctgcacaactcccccgacatccacatcttgcgagatggcgatctgcacacgctg
gtgattgccgaggcgtttgaggacgacacgggccgctacagctgcgtggcctccaacagc
ctcggggcggacaatacctcggctgaggtttacattgaaggagcgtcttcctcagactcg
gacggagaaagttcgccgtcaaagtccagatcagccagcagcatgcccgtactacagaag
aaaacaacgaccatgtccctgaccatacgctcgtcgtcccccaaaactccggaggtgctg
cctcatcgcaccacgctggtccagtcactgtcgcagcctctgccacggacgcagagcccg
gtgtcgtcactgtatggcggcgatggctcgggtccgcctacattctcaaaaatgctgcag
gacactcaggcctccgaaggtcaggtggtggttctggagtgcagggtgcgtggggccccg
cctctccaggttaagtggtatcgccaaggcgagcagatcctggactccccggattttcga
attctccagaaaaagccccgatccgcggcggagtcagatgagatctgtaccctggtgatt
gccgaggcctttccggaagacggaggcttgttctgttgcaccgcctccaacccgtatggt
tcagtcaacagttccgcccaactaactgtaacagcaggagccgaggactcctcctccagt
aacggcatgtctggagatagttctgcactggatggggtgtccttccccccaccgcccccg
cccactgagatcagcctgctggaactgccacccaagatgccgcctcaggaagtggcgctg
tggcgcccggaggccgagggaaggcccgaggagatgagcggcatgcccaacggccaaccc
acctctccgccatttccatctgcggtacccgcaccaccccctccccctccgccgcgatct
gaccactctgctatccgagtcccatcggactcacctcccaaccctggaaagctgtcgccc
gccccgccacttcccaccaagcccaaacctaaactgaacgcatcgcaactgaagcagctt
caagagcagattctattggagcagcaggaagctgccctctggcaacagcacaatcaggaa
gtcccgcctccgccgcaggaagcgctcccatccgactcgccatccccgcccctccctcct
cctccctccttccaggagctggagagcagcaccgccatgcaggccagcaccttcaactac
gcgcggcccaagcagttcatcgccgcccagaaccccggcggggtcggcggcgggtacgcc
gcccattcctcaggctcctcgggctccagcctgtcatcccccctttcccctcccagctca
cataaagctttcagcaagatgaccacaccgccgttctccaagggcatggactcgcccggc
tcaccctccttcccaccaccgccgccgcccttctttgtgtccgccaacctgccttcgccg
tcgggcggtgcccaggaattccctccgccaccgccgccacctcctcccccgccgcctcct
ccacccgcatgcgtgtcccccgccttctcggacacgtcctcgcctttttcctccgtcccg
ccgtccccggcttccagctttctgtcctcgatgttgccggccacgtccaccatgccggct
agccccacggtcaacgcgttgggcctccccaaaggaaacggcactgtcaaagccttcccc
aagaagtcgccggccacccgcacgcctcgcatggcttccgactcggacattcagggctct
aaggacgctgttattcaagacctggagaggaagttgcgctttaaggaagaacgtgtcagc
aacgggcagcagaagctaacctacgaggagaagatggctcgtaggctgctgggcgctgac
aacgtcgccaccgtcttaaaggcgcaggactccgaggaggagcccaccacgcaggagtac
aaagtgtccagcttcgagcagcgcctgatcagcgagattgagttccggttagagcgctcg
cccgtcgaggagtcggacgacgacgtgcagcacgacgaggaacacgtgcccggcaacggg
gccccgccctcctttcaaaacaagctcaaacactacaaagtgtttgagggcatgcccgtc
accttcacctgcaaggtgcatggggaccccaaaccaaaggtgtactggttcaaagatggc
aagcagatctccaagcgcagcgagcactatcgcatcggtcgcaccgccgacggcacgtgc
acgctgcacacggctgccgcctccctcgatgacgacggcaactacaccatcatggccgga
aaccctgagggccgggtgagctgcacgggcaggatgatggtgcaggcagtcaaccagcga
ggtcgcagccagcgctcgacaccgggacacatgcgcaggccaaggtcgcgttcccgagat
agtggtgacgagaacgacaacatccaggagcgccattttcgcccgcacttcctccaggca
cccggcgacctcatcgtgcaggagggacgactgtgtcgcatggactgcaaggtgagcggg
ctgcccaccccagacctggtgtggcagctcaacggtcagaccatccggcctgactcagcc
cacaagatgctggtgcgcgagaacggcgttcactcgttggtcatagagcccgtgggcgcc
cgcgatgccggcatctatacgtgcatcgccagcaaccgcgccgggcaaaactctttcaat
ctcgagctcatcgttgcagctaaagagctgcacaaacctccgtcgttcacggagaagctc
cagaacaccactgtggccgaggggcaccctgtccgcctggaatgccgcgtcagcggtgtc
ccctacccgcaaatattctggaaacgtgagaatgaatcactcacgcacaacacggacaga
atcagtatgcaccaggacaactctggctacctgtgcatgatcatccagcctgcctataag
gaggatgccggttggtacacagtgtcggccaagagcgaggcgggcatcgtctccagcacc
gcccgccttgacgtgcttggtcagtggcagcacccggcgagcgcacgtaaggccaaaccg
ctgcgaccatccagcagccgctacgccgccctgacagagcgtggcgtggacgtcaaggcg
gccttcttccccgactgcagccctctgcctccaggatccctcgtggagagcgatgacctg
tag
DBGET
integrated database retrieval system