Syngnathus scovelli (Gulf pipefish): 125972755
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Entry
125972755 CDS
T08785
Symbol
clpb
Name
(RefSeq) mitochondrial disaggregase
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sscv03110
]
125972755 (clpb)
Chaperones and folding catalysts [BR:
sscv03110
]
Heat shock proteins
HSP100
125972755 (clpb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Ank
Ank_2
Ank_3
ClpB_D2-small
Ank_5
AAA_5
AAA
Ank_4
Zeta_toxin
Sigma54_activat
AAA_22
Torsin
AAA_16
AAA_24
AAA_3
YchF-GTPase_C
nSTAND3
ABC_tran
NACHT
ATPase_2
RuvB_N
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
125972755
NCBI-ProteinID:
XP_049582683
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All DBs
Position
7:6980132..6999955
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AA seq
679 aa
AA seq
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MLSSIPTRLFARRSRSLSPCRRVLQTSSTASACQPMIREPPVDNNRNPIVSTSRVSRRGI
LADDTAANSVNQSVQYHHLAPRWLSSLENRRSSWAALASRGRNNNMYWEDAGQRAGGEDG
GSSGGASPLKLASAGLLSAAAVAFCLKKDSDDKGDALLEAARTNNPQDVARLLQEGVDPN
HRHRLGWTPLMVAAINRHHSVVKVLLEAGADPNAGDDFNNVYDTSRERGIHSLEVLVSRE
DEFSSRLSSRAGFRGCSALHYATLADDLGIVSMLLQFGANPLQANGLGHTARAYAKDGEV
STLLQEWEGKFKEAQARREAEERRRFPLERRLKEHIIGQEGAINTVASAIRRKENGWYDE
EHPLVFLFLGSSGIGKTELAKQVARYMHKDIKKGFIRMDMSEFQEKHEVAKFIGSPPGYV
GHEEGGQLTKLLRACPNAVVLFDEVDKAHPDVLTIMLQLFDEGRLTDGKGKTIECKDAIF
IMTSNVASDEIAQHGIQLRQEAEEVTRRKLAANLEDAQKGDDITISRQFKESVIRPILKA
HFRRDEFLGRINEIVYFLPFCHSELLQLVSKELNFWAKKAKQRHDITLQWDRPVLDLLAD
GYNLHYGARSIKHEVERRVVNQLAAAYEQELLPKGCTLRLSVQSDGHEERGASGLRLEVV
GEDSSARTLDIRPPLSPEH
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgtctattcccactagattgtttgcacgaaggtcgcgaagcctgtcaccgtgc
aggcgcgttctccagactagttcgaccgcctctgcgtgtcagcccatgatcagagagcca
ccggtggataacaaccgcaacccgatcgtgtccacctcccgggtgtcaagacgggggatt
ttggctgatgacaccgctgctaacagcgtcaaccagtcggtgcagtatcaccacctcgcc
cctagatggctgtcaagcctggaaaaccgtcgaagctcttgggccgcgctggccagcaga
gggcgcaacaacaacatgtactgggaggacgctggtcagcgagccggaggcgaggatggg
ggttcgagtggaggcgccagcccgctgaaactggcctccgctggcctactgtctgctgct
gctgtggccttctgcctgaagaaagactctgatgacaaaggtgatgcccttttggaggca
gcaagaaccaataacccccaagatgtggccagactgttgcaggaaggggtggacccaaat
caccgacaccgtcttggttggaccccacttatggtggctgccattaaccgtcaccacagt
gtggtgaaggttctgctcgaagctggtgctgacccaaatgctggagatgacttcaacaac
gtttatgacacttcaagggagagaggcatccactcactggaagtgctggtgtccagagag
gacgaattcagcagccggctcagcagcagggctggtttccgtggctgctcagcacttcac
tacgctacactcgccgatgacctgggcattgtcagcatgcttctccaatttggtgcgaat
cctctgcaggccaacggtttgggacacacagcacgagcctatgccaaagatggagaagtc
agcacactactgcaggagtgggagggcaagttcaaggaggcgcaggctcgacgggaggcg
gaggagagaaggaggttccccctggagaggaggctgaaggagcacatcatcgggcaggag
ggggccatcaataccgtggcttcagccatccgaaggaaggagaatggttggtacgatgaa
gagcacccgctcgtgttcctcttcctgggttcatcgggaatcggaaagacagagttggct
aaacaagtggctcgttacatgcacaaagatatcaaaaagggcttcatccggatggatatg
tccgaattccaagaaaaacacgaggtcgccaagttcatcggctcaccaccaggatacgtc
ggacacgaggaaggaggtcagctgaccaagctgctgagggcgtgccccaacgccgtggtc
ctgtttgacgaagtggataaggctcaccccgacgtcctcaccatcatgcttcagctcttt
gatgaggggcgtcttacggacggcaagggtaagaccatagagtgtaaagacgcaatcttc
atcatgacgtccaacgttgcgagtgacgaaattgcccagcatgggatacagctgcggcag
gaagcggaggaggtcacccgcaggaagttggcagctaatcttgaggatgcacagaaaggt
gatgacatcacaatttccagacagtttaaggagtccgtcattcgaccaatccttaaggca
catttccggagggacgagtttctaggtcggatcaatgaaattgtctacttcctgccattt
tgtcactctgagctgctccagctggtcagcaaggagctcaacttctgggctaagaaggcc
aagcaacgccatgacatcacccttcagtgggatcggcccgtcctggacctgttggcggac
ggttacaacctacattacggagcacgctccattaagcatgaggtggagcggcgtgtggtg
aaccaactggcggcggcctacgagcaggagctactgcctaaaggctgcaccctgcgactt
tccgtccagtccgacggccacgaggagcgcggcgcctccggcttgcgcctggaggtggtc
ggggaggacagctcggcaaggacgctggacattcgccctccgctcagtcctgaacactaa
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