Syngnathus scovelli (Gulf pipefish): 125972806
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Entry
125972806 CDS
T08785
Symbol
cadm1b
Name
(RefSeq) cell adhesion molecule 1b isoform X1
KO
K06781
cell adhesion molecule 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125972806 (cadm1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125972806 (cadm1b)
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
Nectin family
125972806 (cadm1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
C2-set_3
KOW2_Spt5
Motif
Other DBs
NCBI-GeneID:
125972806
NCBI-ProteinID:
XP_049582746
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Position
7:complement(2585773..2681139)
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AA seq
420 aa
AA seq
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MASTASGSLALSLAFVVISMGFFLKGAAETITVEGQNLATDNVSVVEGEMATISCRVKNN
DDSVIQLLNPNRQTIYFRDVRPLKDSRFQLVNFSDNELRVSLSNVSLSDEGRYVCQLYTD
PPQEAYADITVLVPPGSPIIESREDVVSEGNETELTCTASGSKPAASIRWMKGDEEMTGE
TTVEETYDRMFTVISRVRFLVSKEDDGMPVDCVVEHPAANDLLAQRNLEVLYKPEVKILV
TYPQGLTREGDNLDLTCVLGGKPHPRRINWLRVEEDLPPHAVVTGSDLFIENLNKSFNGT
YRCVASNTVGEAYDDYVLYVYDAPTTIPTPTTNPVNTQDSRAGEGTPPKLDHAVIGGVVA
VVMFAILCALIVLGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGHNNTDEKKEYYI
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcacggcaagcggatctctcgctctctcactggcttttgtcgtgatttcaatg
ggcttcttcctcaaaggagctgctgaaaccatcacagtggaaggtcagaacctggcgacg
gacaacgtttcggtggtggagggcgagatggccaccatcagctgcagagtgaagaataac
gacgactcggtcatccaactgctcaaccccaacaggcagaccatctacttcagggatgtc
agacccctgaaggacagccggttccagctggtgaatttctccgacaacgaactgcgggtg
tccctgtccaatgtgtcgctctcggacgaaggacgctacgtgtgccagctctataccgat
ccgcctcaggaggcctacgccgacatcaccgtcctggtgcccccgggcagcccgatcatc
gagagccgcgaggacgtggtcagcgagggcaacgagacggagctcacctgcacggccagc
ggcagcaagccagcggcctccatcagatggatgaaaggagatgaggaaatgacaggcgaa
acaacggtggaagagacgtacgaccgaatgtttaccgtcatcagtcgcgttcggttcctc
gtcagcaaagaggacgacggcatgccggtggattgcgtcgtcgagcacccggccgccaac
gacctgctcgctcagaggaacctggaagtgctatataaacccgaagtgaagattttagtg
acgtatccccaaggattaactcgagagggcgacaatctcgatctgacgtgcgttttggga
ggaaaaccacaccctcgtcggatcaactggctgagggtggaggaggacctgccgccccac
gccgtggtcaccggctcggacctcttcatcgagaacctcaacaaatccttcaacggcacg
tatcgctgcgtggcctctaacacggtgggcgaggcctacgacgactacgtcctctacgtg
tacgatgctcccactactatccccacacccaccaccaatccagtcaacacgcaagactcc
cgagcgggtgaaggcacgccacccaaacttgaccacgccgtcatcggcggcgtggttgcc
gtggtgatgttcgccatcctctgcgcgctcattgttctcggtcgatactttgccaggcac
aaaggcacttacttcacgcacgaagccaaaggggcggacgacgccgccgacgccgacacg
gccatcatcaacgccgagggaggacataacaacacggacgagaagaaggagtattacatc
taa
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