Syngnathus scovelli (Gulf pipefish): 125972833
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Entry
125972833 CDS
T08785
Symbol
cul3b
Name
(RefSeq) cullin-3b isoform X2
KO
K03869
cullin 3
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04120
Ubiquitin mediated proteolysis
sscv04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125972833 (cul3b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
125972833 (cul3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125972833 (cul3b)
03400 DNA repair and recombination proteins [BR:
sscv03400
]
125972833 (cul3b)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Cullin
125972833 (cul3b)
DNA repair and recombination proteins [BR:
sscv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
125972833 (cul3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
RhgB_N
DUF6655
Stu2_CTS
Motif
Other DBs
NCBI-GeneID:
125972833
NCBI-ProteinID:
XP_049582790
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All DBs
Position
7:complement(6793681..6802362)
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AA seq
772 aa
AA seq
DB search
MSNLSKGSTKKDTKMRIRAFPMTMDEKYVNNIWDLLKNAIQEIQRKNNSGLSFEELYRNA
YTMVLHKHGEKLYTGLREVVTEHLINKVREDVLNSLNNNFLQTLNQAWNDHQTAMVMIRD
ILMYMDRVYVQQNNVENVYNLGLIIFRDQVVRYGCIRDHLRQTLLDMIARERKGEVVDRG
AIRNACQMLMILGLEGRSVYEEDFEAPFLEMSAEFFQMESQKFLAENSASVYIKKVEARI
NEEIERVMHCLDKSTEEPIVKVVERELISKHMKTIVEMENSGLVHMLKNGKTDDLACMYK
LFSRVPNGLKTMCECMSSYLREQGKALVSEEGEGKNPVDYIQGLLDLKLRFDRFLQESFS
NDRLFKQTIAGDFEYFLNLNSRSPEYLSLFIDDKLKKGVKGLTEQEVESILDKAMVLFRF
MQEKDVFERYYKQHLARRLLTNKSVSDDSEKNMISKLKTECGCQFTSKLEGMFRDMSISN
TTMDEFRQHLQTTGVSLGGVDLTVRVLTTGYWPTQSATPKCNIPPSPRHAFEVFRRFYLG
KHSGRQLTLQHHMGSADLNATFYGPIKKNLCQQEDGSEVGVGGAQVTGSNTRKHILQVST
FQMTILMLFNNREKSTFEEIQQETDIPERELVRALQSLACGKPTQRVLTKEPKSKEIENG
HVFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKHEIEAAIVRIMKSRKK
MQHNVLVAEVTQQLRARFLPSPVVIKKRIEGLIEREYLARTPEDRKVYTYVA
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatctcagcaaaggcagtaccaagaaggacaccaaaatgaggatacgggccttt
cctatgaccatggatgagaagtatgtgaacaatatatgggacctcctgaagaatgccatt
caggagattcagaggaagaacaacagtggtttgagctttgaggagctgtacagaaacgcc
tacaccatggtgctccacaaacacggagagaagctttacaccggcctgcgggaggttgtc
acagaacatctgatcaacaaagtacgagaagatgttctcaactctctgaacaataacttc
ctccaaaccctaaaccaggcttggaatgatcatcagactgcaatggtgatgatccgggac
atcctgatgtacatggaccgagtatatgtgcagcagaataacgtagagaatgtctacaat
ttgggtctcatcatatttagagatcaggttgtccgctacggctgtatcagagaccacctt
cgacaaaccctactggacatgatcgcacgtgaaaggaagggggaggtggtggacaggggc
gccatcagaaatgcctgccaaatgttgatgatccttggtcttgaaggcagatcagtttat
gaagaggactttgaagcacctttcttggaaatgtcggcagagtttttccagatggagagc
cagaagttccttgcagaaaacagtgcaagtgtgtacataaagaaggtggaggccaggatt
aacgaggagattgagcgggtgatgcactgcctggataaatccacagaggagcccattgtc
aaggtcgtggagcgggagctcatatccaagcacatgaagacaattgtggagatggagaac
tctggtttggtccacatgctcaagaatggcaagactgatgatctggcatgtatgtacaag
ttgttcagtcgagttccaaacggactgaagaccatgtgcgagtgcatgagctcgtacctt
cgggagcaaggcaaggctctcgtgtccgaggagggagaagggaagaaccctgtggactac
atccagggcttactggacctgaagctgcgttttgaccgcttcctccaggaatctttcagt
aacgaccgtctcttcaaacaaacgattgctggcgactttgagtacttcctcaacctcaac
tcgcgctcgcctgagtacctctcactgttcatcgacgacaaactgaaaaaaggagtaaaa
gggctgaccgagcaggaggtggagtccatactggacaaggccatggtgctgttccgcttc
atgcaggagaaggatgtgtttgagcgctactacaagcaacatctggcccgcaggctgctc
accaacaagagcgtgtcggatgactcggagaagaacatgatctccaaactcaagactgag
tgtggctgtcagttcacatctaaactggaaggcatgttccgagatatgagcatctccaac
accaccatggacgaatttagacaacatctgcagaccaccggggtgtctctcggaggggtc
gacctcactgtgagggtgttgacaacaggctactggccgacacagtcggcaacacccaaa
tgcaatatccccccttcgcctcgacatgcttttgaagtcttcagaaggttttatcttggg
aagcacagcggcagacaactcacactgcagcaccacatgggctctgcggatctaaacgcc
accttctatgggcccattaaaaagaatttgtgtcaacaggaggatgggtcagaggtcggc
gttgggggagcccaagtaactggttccaacaccaggaagcatatcttacaggtgtccacc
ttccagatgaccatccttatgctgttcaacaacagagagaaatccacctttgaggagatc
cagcaggagacagatattccagagagggagctggtgcgggcgctgcagtcgctggcctgt
ggaaagcccactcaaagagtactcaccaaggagcccaagtccaaggagattgagaatggt
cacgtgtttacagtcaatgaccagtttacctccaaactgcaccgggtcaaaatccagaca
gtggctgctaaacaaggggagtccgacccagagagaaaagagacccgacagaaggtggac
gatgacaggaagcatgagattgaagctgctattgttcgcatcatgaagtcgaggaagaaa
atgcagcacaatgtcctagtagcagaggtcacacagcagttgcgagcacgattcctcccc
agtcccgtagtcatcaagaagcgtattgaaggactcattgagagggaatatttggcacga
acgccggaggaccgcaaagtgtacacctatgtagcgtaa
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