Syngnathus scovelli (Gulf pipefish): 125972853
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Entry
125972853 CDS
T08785
Symbol
bicra
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125972853 (bicra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125972853 (bicra)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
125972853 (bicra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
125972853
NCBI-ProteinID:
XP_049582823
LinkDB
All DBs
Position
7:3771327..3781801
Genome browser
AA seq
1776 aa
AA seq
DB search
MDDEDGRCLLDVICDPEALNDFLHGSETHLDTDDLLDGSGDPASSFFSATGGHVPEVQPT
VQLSANEATGLPRVSVDLDFLEDDDILGGSPDGEGGSNGIGTNHEPCDILQQSLAEANIT
EQSLQEANAELDLESFGISALPQVVQTLPDAGLPGAAGATVGVGISVGGAAATAIFPGSA
QSATPTPPNATADMLGSVLAQQGLQLQPQVMNKAISVQPFMQPVGLGNVTLQSISSLQTL
PNGSQSGHLGIGQIQVVGQPTVMTINQSGQPILAKAMGSYQLHQSGPEVSGATTQTGLGA
SGGGLLIQSNKTTLGSPSLNGPPTVVSSTNSTSSGTMTAPAGLLGFGSTSLSSGMPPQSQ
TQGQIMHNVIIQRTPTPIQPKPPQGGALQTKLFKPQQQQQLQQQQQQQPTSQNLQNDTTK
ALGLQQIPVSAAQNVTFLTGKPGSNVVLSTQAATQGSQFQQTLFKQQATQAAGKPLSVHL
LNQSGSIVIPSQTVLQGQNHQFLLPQLQAGGQILTQHPGGHIITSQGPGGQLIANQILTA
NQNINLGQVLTSQGHPGAAHILSGPIQLQSGQMGTPTLFQMPVSLAQTQAQTQTHTVSGH
GPTVIQGMPIQNSLTMLGQVEGLSPAVSLQPALQAQPGGVPSSSSCSSTSSVSGAATMAA
TITQGQPSECIAVLGSATDQAAQQASILSMQQAPPAITAVSSSAPSMSLSSPVTAVGLVS
HQAQHSPGRLLFTNQGSSMILSQESLQMFLQQPENREGESTPSVGVPASVIVSGLGVTAP
AHTVRDSQLSDSLVGRSPPVLKQVPSSGHQQPLKIQSMSPSPALSGHATAPPVADSPQPS
QSPLTLSQHIQSPHHQQSRPPSQPQPASQTPSRSCTPSSHPPPLFIVHNQVAEAPSQPQV
AQPQPTQIQVQLLPQPRPASQPAPYHQQEQPPMSQSPKPQLAHSFAAPPAGAAPPAVLKA
QVPVHSLTADQQQHLALLGSQIQTLSAISQPSLQQKQLLDKLHQIQQSILLQVKQPAQAQ
VQAQAQAQALPPASSQFSLQQDVPVDKAAIASSASAATPAQLSSVLQPTSVLITSPATAS
SDLQVVSGVPGPAGAKVNQSIAPVSLTQPAQIQPKPGVISSGGGMTLGKGGMQIHVLGTN
VTQMPAPQPPALLQPQTTAKMPFTAEPSKEARLLEQLRKHQGLVLHPNYSAPFVSFGDTL
NRLLPYHLYQGTAISSQDYQKVDDEFESVSSQLLKRTQAMLDKYRYLLFSESKQRLGPSA
EMVMIDRMFIQEEKLALSQDRILAKERPEEFVANARLLESLAASQHKSPPAEPTSNVTGV
TVAAAAQPPPPPPEPAPPIPAVASHVPPKPPPAPSVSPAPTPTPVAGPPTASFPPTKLVI
KQGGGGASVSWSSSCAPPPSGSEPTSQSPYLSRTPASSSSFFSSSSNSKMDDDDDDALPQ
RTSKPPIKTYEARRRIGLKLKIKQDQTGFGKVVHNTALDPVHTSQPNTPKSQPPSTPTPA
GVIRTQSPVSVTTTTTQSNPSQSSSSVQMNGTLEHHNPASATPAPSQTTCRLPLRKTYRE
NVSPRVRPGVPGGGGDDDSAPYPTPTHERTVIASVKVEKRGQDPDSGLDHVADVFNHAVK
GVKGIGEDRSEQDADFPKYKRTGGKTKQRQAGTFRMDQHAPGPPSPEFPSLPAKRSKSDS
PDMDNASFSSGSPPDDSLNEHLQCAIDSILNLQQEPTLRGHHHRKGGNGRTHSRSAPPHR
PSVPPSSSSASSSLAQHPQVGGRGHNGSLVPQTQSR
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagacggcaggtgccttctcgatgtgatttgtgacccggaagctctcaat
gactttcttcatggatctgagacccatttggacactgacgaccttttggatggttcgggt
gatcccgccagctcgttcttctccgccaccgggggccacgttccagaggtccagcctaca
gttcagctctcggccaatgaggccacggggctgcccagagtcagcgttgacttggacttc
ctggaggatgacgacatcctgggcggatcccccgacggggaaggcgggagcaacggcatc
gggaccaaccacgagccctgcgacatcctgcagcagagcttggccgaagctaacatcacc
gagcagagtttacaagaagccaatgcggagctggacctggaatcgtttggcatttccgct
cttccgcaggtggttcagacgctgcccgacgccggcctccctggagcggcgggcgcgacc
gtcggcgtaggcatcagcgtcgggggggcggcggcgacggccatattccctggctcggcc
caaagtgccacgcccactcccccgaacgccaccgctgacatgctgggctctgtgctggct
cagcaaggtcttcagctccaaccgcaggttatgaacaaggctatcagcgttcagcccttc
atgcagcccgtgggcctcgggaacgtgacgcttcagtctatttcgagtcttcaaactctc
ccgaacgggagccagtctggacatttggggattggacagattcaggttgtgggtcaaccc
accgtcatgactatcaatcagtccgggcagcccattctggccaaagcgatgggaagctac
cagctgcaccagtccgggccggaggtttcaggggcgacgactcagactgggctcggggca
tcgggaggtggacttctcatccaaagcaacaaaaccacgttgggctcgccatctttaaat
ggaccgccgacggttgttagcagtacaaacagtaccagtagcggcaccatgaccgcacct
gctggacttctgggctttggaagtacatccctcagttcaggaatgccgccccaatctcaa
actcaaggccaaatcatgcacaacgtgattatccagcgcacaccgactcccattcagcct
aaacctcctcaaggaggagccctccaaacaaaacttttcaagccgcagcaacaacaacag
ctgcagcagcaacagcagcagcagccgacgtcccaaaacctgcagaacgacaccaccaag
gccctcgggctgcaacaaattcctgtttcggcagctcagaatgtaacgtttctgactgga
aaaccaggctcaaatgtcgtacttagcacccaagccgccacgcaaggctcgcagttccag
caaaccttgttcaagcaacaggcgacgcaagcagccggcaaaccgctcagcgtacacttg
ttaaaccaatcgggcagcatcgttattccctcccagacggttctgcaaggtcagaatcat
cagttcctcctgccacagttgcaagcgggcgggcagatcctgacccagcaccccgggggc
cacatcataaccagtcagggccctggtggccagctcattgccaaccagattttaacagcc
aaccagaacatcaacttgggtcaagttttgacttcccagggacatcccggggcagcccac
attctatccggacccattcagcttcagtctggtcagatgggcacgcccaccctgtttcag
atgcccgtctcgttggctcagacgcaggcccagacgcagacccacaccgtctcgggacac
ggtccaacggtcatccagggcatgcctatccagaactccctgaccatgctcggtcaggtg
gagggcttgagcccggcggtcagccttcagccggctctgcaagcccagccaggtggagtc
cccagcagcagcagttgtagtagcaccagtagcgtaagcggagcggccaccatggcggcc
accatcacgcaagggcagccgtcagagtgcatcgcagttctggggagcgccaccgaccag
gccgcccagcaggcctctatcctctccatgcagcaagctcctcccgcaatcaccgccgta
tcgtcctccgctccgtccatgtccctgtcttcgccagtgaccgcggtcgggctggtctcg
caccaggctcagcacagcccggggaggcttttgttcaccaaccagggctccagcatgatc
ctgagccaggagtctctgcagatgttccttcagcagccggagaacagagagggcgaatcg
accccctcggtgggggtccctgcgtccgtaatcgtcagcggcctcggcgtcacagctccg
gcccacactgtccgtgacagccaattaagtgattcgttggtgggtcgcagccccccagtg
ttaaagcaggtaccctccagtggacatcagcagcccttaaagatccagagtatgtccccc
tcgccagccttgagcggtcacgccacggcgccccctgtggccgacagcccgcagccctcg
cagtcgccgctgactctcagccaacacatccaatcgccgcaccaccagcagtcgcgtcct
ccctcgcagccccagccggcgtcgcaaacgccctcccgctcctgcacgccctcgtcacac
ccgccgcccctcttcatcgtccacaaccaagtcgccgaggccccctcgcagcctcaggtg
gcccagccgcaaccgacccagatccaagtccagctcctccctcagccgcggcccgcctcc
cagccagcaccttaccaccaacaggagcagccccccatgtcgcagtcgcccaagccccag
ctggcgcactctttcgccgcccctcccgccggcgcggcgccaccggccgtattaaaagcc
caagtccccgtccacagcttgacggcggatcagcagcagcacctggcgctgttgggatcg
caaatccagacgctgtcggccatcagccagccctcgctgcagcagaagcagctgctggat
aagctccaccagatccagcaaagcatcctgctgcaggtcaagcagccggctcaggctcaa
gtgcaagctcaagcccaggctcaggctcttcctccagccagcagccagttcagcttgcag
caagacgtgcctgtggataaagcggcgatcgcctcgtcggccagtgcagccacacctgct
cagctgtcctcggtgctgcagcccacctctgtgctcattacaagtcccgctacagcctca
agtgacttacaggtagtctcaggagtcccgggaccagctggagccaaggtgaatcagagt
atcgctcctgtgagccttacacagcccgcacagattcagccaaagcctggagtgatcagc
tcgggtggaggaatgactcttggtaaaggtggcatgcagatccacgtgttaggtaccaat
gtcacccaaatgcctgctccacaacctccagctcttctacaacctcaaacaacagcaaag
atgcctttcactgcagagccaagcaaagaagccaggttgctggagcagctgaggaaacat
caaggcttggtgcttcacccaaattacagcgctcccttcgtctccttcggggacacgcta
aaccgactgctgccttaccatctctaccagggaactgccatttcctctcaagattatcag
aaagtggatgatgaatttgagagcgtctcctcccagctgctgaagagaacgcaagccatg
cttgataaatatcgatacctgctcttttccgagtcaaagcagagacttggcccctcggca
gagatggtgatgatcgaccgcatgttcatccaggaggaaaagctggccttgagccaggac
cggattttggccaaggagagaccagaggagtttgtggctaatgctcgtctgttggagagt
ttagctgcgtcccaacacaagtcccctccggccgagcccacctccaacgtcactggtgtc
accgtggccgccgctgcccagccacccccgccgccgccggaacccgcacctcccattccg
gctgtagcttcccacgtcccaccgaaaccccctcccgccccgagcgtgtctccagcgccg
actcccactcctgtcgctggcccccctaccgcctccttccctccgacaaaattggtcata
aagcagggtgggggaggggcctcggtgtcgtggtccagtagctgcgcccctcctccgagt
gggtctgaaccgacaagccagagcccttacttatcgcgtacccctgcgtcgtcgtcgtcg
ttcttttcctcctcctccaactctaaaatggacgacgatgacgacgacgcgctcccgcag
aggaccagcaagccacccatcaaaacctacgaggctcggagaaggatcggcttgaagctg
aagatcaagcaggaccaaacgggcttcggtaaggtggtccacaacacagccttagaccca
gtgcacacgtctcagcccaacactcccaaatcccaacccccgtccactcccacgcccgct
ggggtcatcaggacccagtcgcccgtgtcggtcaccacgacgaccacacagtccaaccca
tcccagagctcgtcctctgtgcaaatgaacggcaccctggagcaccataacccggcctcc
gccacccccgcgccctcgcaaaccacctgccgcctccccctccgaaagacttaccgggaa
aacgtcagccctcgggttcggccaggcgtcccgggcggcggcggggacgacgactcggcg
ccctaccccacccccacccacgagaggacagtcatagccagcgtgaaggtggagaaacga
ggtcaggaccccgactcgggcttggaccacgtggccgacgtgttcaaccacgccgtcaag
ggggtgaaagggatcggggaggatcgctcggagcaggacgccgacttccccaaatacaag
cggaccggtgggaaaaccaaacagagacaagcggggacttttaggatggaccagcacgcg
ccggggcccccttcgccggagttcccttcgctccccgccaagcgcagtaagtcggattcg
cccgacatggacaacgccagcttctccagcggcagcccccccgacgactccctcaacgaa
catttgcaatgcgccatcgacagcatcctcaacctacagcaggagcccacgctacggggg
caccaccaccgcaaggggggcaacggccggacgcattcacgctcggcccccccgcacaga
ccctcggtgcccccctcgtcttcctccgcctcgtcctccctggcccagcatcctcaggtc
ggcggccgcggccacaatggcagcctggtgccgcagactcagagcagataa
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integrated database retrieval system
