Syngnathus scovelli (Gulf pipefish): 125972882
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Entry
125972882 CDS
T08785
Name
(RefSeq) CD166 antigen homolog A-like isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125972882
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125972882
04090 CD molecules [BR:
sscv04090
]
125972882
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
ALCAM
125972882
CD molecules [BR:
sscv04090
]
Proteins
125972882
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
C2-set_2
ig
I-set
V-set
C1-set
Syndecan
Ig_4
DUF6377
Motif
Other DBs
NCBI-GeneID:
125972882
NCBI-ProteinID:
XP_049582866
LinkDB
All DBs
Position
Unknown
AA seq
571 aa
AA seq
DB search
MHLLSVGSLGSLVFLFATVLRQASSLETVVGMYGQTLEIPCNKGVVKAEDVLITKWKYDK
GDRRVGDLLVRTKTESVSIIATDEYKDRINMAANSSLLLSAAKLSDQRTFTCMVVLSLDI
NEYPVNVVVYKAPAGVEISDKAPELEIGKPTKLATCVAKDANPAANITWLKNNKPLVDGG
KGVSIRASVQVDPVTGLSSTSSTLEYSATKEDADAQFSCSARHQVGKELTSPELTFTITY
STETIILQVIAPEPLLEGDNVTLKCVADGNPAPTSFNFHLKGDVIPVKNTNTYTLAHVSR
DTTGEYQCSLIDNPAMMASKNVTVNYLDINLSPTGNVIKTAGEALELSFQIDSSGESKVS
WTKDNVKLDKEPKFNKLKYSDSGFYEGEVKMGALRRKASFDLVVEGAPVIKQLSKHRSED
GQHKVLICEAEGSPKPSVSWSINGTSYDESPFVNGKVTHKITVVPAVNLTVYCTVSNEYG
VDTRDINVSSLFEEVRVDKRDQSDDADQTKLVVGVVVGLLIAAMVIGLAYGIYQKKSKQG
SWKTGEKENGSSEEERKLEEKVEENSQKAEV
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcacttgttgtccgtcggctccctgggctccctcgtctttctcttcgcaaccgttctc
cgccaagcaagcagcctggagacggtggtgggcatgtacggccaaacgttggagattccg
tgcaacaaaggagtcgtgaaagcggaagatgttctgatcacaaagtggaaatatgataaa
ggagatagacgcgtaggagacctgctggtccgaacgaaaaccgaaagcgtctccattatc
gccacggacgaatacaaggaccgcatcaacatggccgccaactccagtctgctactgtct
gccgccaaacttagtgaccagcgcacttttacctgcatggtggtcctcagcttagatatc
aatgagtacccggtcaacgtggttgtctacaaggcacccgcaggagtggagatttcggac
aaggcaccagagctggagatcggcaaacccaccaagctggccacttgtgtcgctaaagac
gccaacccggcagccaacatcacatggctgaagaacaacaaacctctggtggatggcggt
aaaggcgtttccatccgagcctcggtgcaggttgaccccgtgaccggcctgtccagcacc
tcgtccacgctggagtactcggcgaccaaagaggacgccgacgcgcagttctcgtgcagc
gctcggcaccaagttggcaaggagttgacgtcacctgagctcacgttcaccatcacatac
tccacggagaccatcatccttcaagtgattgccccagaacctctgctggaaggcgacaac
gtgaccctcaaatgcgtagcggacggcaacccggcgccgaccagctttaacttccacctg
aagggcgatgtcatcccggtgaaaaatacaaatacatacaccctcgctcatgtctcccgt
gacaccaccggtgaataccaatgctccctaattgacaaccccgccatgatggcttccaag
aacgtcacagtcaattacctagacatcaatttaagccccactgggaacgtcatcaagaca
gccggggaggccttggagctgtcttttcagatcgactcttcgggcgaatcaaaagtctcc
tggaccaaggacaatgtcaagctggacaaagagcccaagtttaacaagctgaagtactct
gattctggcttctacgagggtgaggtgaagatgggggcactccgcaggaaggcttctttc
gacctggttgttgaaggcgctccagtcatcaaacagctgtccaaacaccgtagtgaagat
ggtcaacataaagtcttgatttgtgaggccgagggctctccaaagccatctgtttcctgg
agcatcaatggtacctcgtatgatgaaagtcccttcgtcaacggcaaggtcacgcacaaa
atcaccgtggtgcccgctgtcaacctgaccgtctactgcaccgtgtccaacgaatatggc
gttgacacgcgggacatcaatgtgtcgtctctatttgaggaggtgagagtggataaacga
gaccaatcggacgacgccgatcaaaccaagttggtggtcggggtggtggttggacttctc
atcgccgccatggtcattgggctggcttacgggatctaccagaagaaatccaaacaaggc
agctggaagaccggcgagaaggagaacggctcctccgaggaagagagaaagctggaggag
aaggtggaggagaacagccaaaaagccgaagtgtag
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