Syngnathus scovelli (Gulf pipefish): 125972932
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Entry
125972932 CDS
T08785
Symbol
dscamb
Name
(RefSeq) cell adhesion molecule DSCAM isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125972932 (dscamb)
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
DSCAM family
125972932 (dscamb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
Ig_5
Pur_ac_phosph_N
C1-set
V-set_CD47
C2-set_3
fn3_2
Interfer-bind
Ig_C17orf99
ARM_TT21_4th
Motif
Other DBs
NCBI-GeneID:
125972932
NCBI-ProteinID:
XP_049582962
LinkDB
All DBs
Position
7:complement(10212743..10301333)
Genome browser
AA seq
2069 aa
AA seq
DB search
MWILAFTLFQSILNVFSEDLHSSLYFVNASLQEVVFASTTGTSVPCPAGGAAPASLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFNFLPSSFSKLIHDNTYYCTAENPTGKIRSQDVHIKA
VSREPYTVRVADQKAMRGSVAVFKCIIPASVESYVSVVSWEKDTVSINSGQRYLITPTGA
LYILDVLPEDGLNNYRCTTRHRYTGETRQSNSARLIVSDPTNAEPGILDGFDHRDVMINH
RVELPCKASGYPFPKYRWLKDNSPLEPDSRFRQTVTGLLIESTQPSDSGTYVCEVWNSYG
NAEVMGHLHVRQPLKAMVSPRKVKGSVGSKVSLSCSVSGSDEYELSWYRNGEIIYPGNNV
RFTGLNRENLIMEGMSKSDGGAYQCFARKGKMSAQDFVQVILEDGTPKILSSFSEKVVNP
NEPVFLVCNVKGTPPPRCMWSLDDDPVIKDSHHHLGHYDSHEGHVVSQLNVTHTQVQDGG
VYRCTCSNSAGLVYHQARINVRGRASIRSMKNVTAIAGRDAFIHCRVIGYPYYSIKWYKN
SALLPFNHRQRAFENNGTLRLTNVQQGDAGEYNCKVMVQPNKMDSQSVHLRVRVPPYIQP
FEFQRFTIGQRVFIPCVVMSGDRPLDITWQKDGRPIPTSLGVTVDNIDFTSSLRISNLTP
DHNGNYTCIARNEAAAVEHQSQLIVRVPPQFVVQPEDQDGIYGKTVTLNCSAEGYPPPTI
VWEHSKGAGVPLFQPILLNSGSRIQQLSNGSLLIKHVLEDDNGFYLCKVSNDVGADVSKS
MYLTVKIPAMITSYPNTTLATHGEEKKMSCIAHGEKPIMVRWEKEERIINPETSRYIVSV
KEVADEVVSTLVIMPTVREDSGFFSCHAINSFGEDRGIIQLTVQEPPDPPEVEIREVKDR
TIALRWTMGFDGNSPITGYDIECKNKSASWLSAQVTKDVSPQLNQATIIDLHPSSTYNIR
MVAKNIIGNSNPSNELTITTDEAAPDGPPQDVTLEPTSPQSIKVSWKPPHKHLQNGVIRG
YQVGYREYSPGGSHQFTIISVDTTGDTMESIVLDNLRKFTQYSVVVQAANRAGTGPSSQQ
VVTKTLEDVPSRPPENVLAVAKSPEVISLSWIQLPREALNGNLLGYRVIYWANLLDGELG
EIRNVTTSQPSLELDGLEKYTNYSIQVLAFTSAGDGVRSEQIYVRTKEDVPGPPAGVKAA
ASSSSVVFVSWLPPLKLNGIIRKYIVFCSNLHPMVIVMSEFEASPDAYFYRITNLARNRQ
YSIWVVAVTAAGHGNNSEKITVEPLAKAPARILTFNGTVTTPWMKDIVLPCKSVGDPPPT
IKWLKGNTNGTPTHVLVDGRRSVHANGSFIIRTVKAEDSGNYSCVASNNWGSDEITLNLQ
VQVPPDQPRLTVTKTTTTSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERL
YRLENLKCGTWYKFTLTAQNAVGPGRISEIIEAKTHGKEPQFAKEHELFTSINSTRARLN
LVGWNNGGCPITSFILEYKAVESATWTTAQRTSLTKSYILYDLQEATWYDLQMKVINSAG
SAEKKLTFATLNADGSTIPPLLKTGDPISDNMSGSGGLKMVVTITSILVVAVLVFIMLMV
LKRRRREQRLKRLRDAKSLAEMLMSKNTRTPENVNKQQQTLRMHIDIPRAQLLIEERDTM
ETIDDRSTVLLTDNDFGDTNKQKSSTVTHTVHYQSLSQATGPLVDVSDARPGTSESHHYP
TARRTAKAGPAAARSRYASQWTLNRPHPTSSSHTLTTDWRLPTPRATGSVDKESDSYSVS
PSQDTDRARSSMVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQMTA
GTNDYTDSLTSSTPSESGICRFTASPPKPQDVSRVMNMAAPKAHRPGGELVHLPPYLRMD
FLLNRGVARGSGASSGGAGGGAGGGVAGGSAGATGETRGGAGGGAMGQTCLEPQRSRTLK
RPPPMEPTMEVPSPREVQQWQPGTASTLPHRDVRERGEARGEVRAEVPPTGDLAQAQAAK
LSTSQESLLDSRGHLKQSNNPYAKSYTLV
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtggatattggcttttaccttgttccagagcatcttgaatgttttcagtgaggaccta
cattctagcttatactttgtcaatgcatcgcttcaagaggtagtattcgccagcaccaca
gggacctcagtgccctgtcctgctgggggtgcagctcctgcctcattgcgctggtacctg
gccaccggtgaggaaatctatgacgtcccgggcatccgccatgtccaccccaacggaaca
ctccagatcttcaacttcctgccatccagcttcagcaagctgatccacgacaacacgtac
tactgcactgccgaaaaccccacgggcaaaattaggagtcaggatgtccacattaaagct
gtttcacgggaaccctacacggttcgagtggctgaccagaaggctatgcgaggcagtgta
gcggtcttcaagtgcattatccctgcttctgttgagtcctacgtcagcgttgtatcatgg
gagaaagacactgtctcaatcaactcaggacaaagatatctcatcacacctacaggagcc
ttgtacattttggacgtcctgcctgaggatgggctgaataactaccgctgcaccacacgt
caccgctacactggggagactcgacagagcaacagtgcacgtctcattgtgtcagacccc
accaatgccgagccaggcatcttggacggtttcgaccaccgggatgtgatgattaatcat
cgagtggagctgccctgcaaggcgtctggctatccgttccccaagtaccgctggctcaag
gacaacagcccgctggagcccgacagtcgcttccgccagactgtcacaggtttgctgata
gagagcactcagccgagcgactctgggacgtatgtttgtgaagtttggaacagctacggc
aacgccgaggtcatgggccacctgcatgtcagacaacctttgaaggcaatggtcagccct
cggaaagtgaaaggcagcgtgggaagcaaggtgtctctctcctgtagcgtgagcggatct
gacgagtacgagttgtcttggtaccgtaacggagagatcatctaccccggcaacaacgtc
cgtttcaccggcctcaaccgggagaatctcatcatggaaggaatgtcaaagagtgacggc
ggggcctatcagtgctttgccagaaagggcaaaatgtccgctcaagactttgtgcaagtc
atcctcgaagatggtacgccaaagatactctcctccttcagcgaaaaggtggtaaaccca
aatgagcccgtcttcctggtgtgcaacgtcaagggcacgccgccgccccgctgcatgtgg
tcgctggacgacgacccggtcatcaaagacagccaccatcacctgggacactacgatagc
cacgagggccacgtggtcagccagctcaacgtgacgcacacgcaggtgcaggacggcggc
gtgtaccggtgcacgtgcagcaactcagccggcctcgtgtaccaccaggctcgaataaac
gtaagaggccgtgccagcatccgttcgatgaaaaacgtcaccgccatcgctggacgggat
gccttcattcactgccgtgtgattggctatccttactattccatcaagtggtacaagaac
tctgcattgttgccattcaaccatcgacagcgggccttcgaaaacaacggcacgctgagg
cttaccaatgtgcagcagggagacgccggagagtataactgtaaagtgatggtccaaccc
aacaagatggactcccaaagtgtccacctccgtgtgagagtccctccctacattcagccc
tttgagttccagcgctttaccatcggtcagcgtgtctttatcccctgcgtggtcatgtca
ggtgaccggcctctggacatcacctggcagaaagatggacgacctatcccgactagcctt
ggcgtgactgtggataacattgatttcaccagttcactgagaatctccaacctgacgcct
gaccacaacggcaactatacttgcattgcccgcaatgaagcggccgctgtggagcaccag
agtcagctcattgttcgagttcctcctcagtttgtggttcagcctgaggaccaagatggg
atctatgggaaaactgtcactctcaactgctctgctgaaggatacccaccacccaccatt
gtatgggagcactccaaaggtgcaggtgtccccctgtttcagcccatcctcctgaacagc
ggctctcgcatccagcagctgagtaacggatccctgctgatcaaacacgtgctggaggac
gacaatggcttttacctgtgtaaggtcagcaacgacgtgggtgctgatgtcagcaagtcc
atgtacctcaccgtcaaaatcccggccatgatcacgtcgtatcccaacaccaccctggcc
acacatggggaagagaagaagatgagctgcatagcacatggggagaagcctatcatggtg
cgctgggagaaagaagaacgcatcatcaaccctgagaccagccgatacatagtcagtgtc
aaggaggtggccgacgaagtcgtctcaacgctggtgattatgcccactgtgcgcgaggac
tctggtttcttctcctgtcatgccatcaattcttttggagaagatcgaggaatcatacag
cttacagtgcaagaacctcctgaccctcctgaggtggaaatccgggaagtcaaagacagg
accatagcacttcgctggaccatgggcttcgatggcaacagccccattacaggatatgac
atagagtgcaagaacaaatcagcttcatggctatcagcccaagttaccaaagatgtgtca
ccacaactcaaccaggccactatcattgaccttcacccttcttctacctacaacatccgc
atggttgccaagaacatcatcggcaacagcaacccgagcaacgaactcaccatcactact
gatgaagccgctcctgacggccctccacaagatgtcactctagagcccacctccccacag
agcatcaaagtctcctggaagcctccccacaagcacttgcagaacggtgtgatccgaggc
taccaggtgggctacagggagtacagccctggtggaagtcaccagttcaccatcatcagc
gtggacaccacaggagacacaatggagagcattgtgctggacaacttgaggaagtttacg
cagtacagcgtggtagtccaagcggcgaatcgggccgggactggtccatcttcgcagcag
gtggtcaccaaaaccttggaggatgtgccatctcggcctcctgaaaatgtgcttgctgtg
gccaagtcccccgaggttatctccctctcctggattcagcttccgagagaggctcttaat
ggaaacttgctgggctacagagtcatctactgggcaaacctgcttgatggagaactcggt
gaaatcaggaacgtaaccaccagtcagccatctctggagctggatggtctggagaaatac
actaactacagcattcaggtgttagccttcaccagtgctggagatggcgtacgcagtgaa
cagatttatgtgcggaccaaggaagatgttcctggtccccctgcaggtgttaaggccgct
gcctccagcagttctgtggtgtttgtctcctggctgcctcctctcaagctaaacggcatc
attaggaaatacatcgtcttctgctcgaacctgcatccgatggtaatagtaatgagtgag
tttgaggcctctcccgacgcatatttctacaggatcacaaatttggctcggaacaggcag
tacagcatctgggtggtggctgtgacagccgctggtcatggcaacaatagtgagaagatc
acagtagagcctttggctaaagccccagccagaattttaaccttcaacggtacagtgacc
actccttggatgaaggacattgtcctgccgtgcaaatcagttggagaccctcctcccaca
atcaagtggctcaagggaaacaccaatgggactcctacgcatgtcctggtagatggtcgg
cggagcgtccacgccaatggtagcttcatcatccgcacagttaaagcagaggattccgga
aactacagttgtgtggccagcaacaactggggctcagacgagatcacgcttaatctgcag
gttcaagtgcctcctgatcagccacgtctcactgtcaccaagaccaccacaacttcaatc
acgttgtcatggataccaggagacaatggcgggagctctatcagaggatacatcctgcag
tactcagaggacaacagcgagcagtggggcagttttcccatcagtcccagcgagcgcttg
taccgtctggagaacttgaagtgcggcacctggtataaattcaccttgaccgcccagaac
gctgttgggccgggccgaattagtgagataattgaagctaaaactcacgggaaagaaccg
cagtttgccaaagaacacgaactcttcaccagtatcaactccacccgtgccagactcaat
ctggttggctggaacaacggcggctgtccaatcacttccttcattcttgagtacaaagcc
gtggagtcggccacctggaccacggcacagcgcacgtcgctgaccaagagctacatcctg
tacgacctgcaggaggccacctggtacgacttgcaaatgaaggtcatcaacagtgctggc
tcagcagaaaagaagctcacctttgccactctcaatgcagatggaagtaccattcctcct
ctgctaaaaacaggcgatcccatctcagacaacatgtcaggcagtggaggtctgaaaatg
gtggtgaccatcacatccattctggttgtggctgtcctggtgttcattatgcttatggtg
ctaaagagaagacgcagggagcagaggctcaaaagacttcgagatgccaaaagcctggca
gaaatgctaatgagtaagaatacacggacgccagaaaatgtgaacaagcagcaacagaca
ctaagaatgcacatcgatattccgagagcgcagctgctcatcgaagagagggacaccatg
gagacaatcgatgaccgatccacggtgctgctgactgataacgactttggcgacacaaat
aagcaaaagtcgtccacagtgacgcatactgtccactaccagtctctttcccaagccacc
ggaccactggtggacgtgtccgatgccaggcccggaaccagtgagtcccaccattacccc
accgccagacgcactgccaaagccggtcctgccgccgcacgaagtcggtacgccagccag
tggactctgaacaggccacaccccaccagctcatcacataccctgaccactgactggaga
ctacccacgccacgcgctactggatctgtggacaaggagagcgacagctacagtgtcagc
ccatcacaggacacagatcgagcgcgaagcagcatggtgtcaaccgaaagcgcctcctcc
acctacgaggagctggccagagcctacgagcacgccaagatggaggaacagctccgccac
gcaaagttcaccatcaccgagtgcttcatctccgacacctcttctgagcagatgacagcg
gggaccaacgactacaccgacagcctcacgtccagcacgccgtctgaatcgggcatctgc
cgcttcaccgcctcgccacccaaacctcaggatgtcagccgcgttatgaatatggccgcg
cccaaagcgcacagacctggaggagagctggtacacttaccgccttacctccgcatggac
ttccttttgaaccgcggtgtggcccggggcagtggggcgagcagcgggggcgcaggcgga
ggagcgggtggcggagtggccggaggttctgctggtgctacgggagaaaccagaggaggc
gcaggaggaggcgccatgggccagacctgcctggagccccagaggagccgtaccctaaag
aggccccctccgatggagcccaccatggaagtgccctcacccagggaggtgcaacagtgg
cagccgggaacggcgtccaccctcccgcacagagatgtccgggaacggggagaggctcgg
ggtgaggtccgagcagaagtcccccccactggggacctcgcccaagcacaggctgctaag
ctcagcacctcccaggagtccctgctggactccagaggacacctgaaacaaagcaacaac
ccctatgccaagtcgtacactctggtataa
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