Syngnathus scovelli (Gulf pipefish): 125973265
Help
Entry
125973265 CDS
T08785
Name
(RefSeq) choline transporter-like protein 5 isoform X1
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125973265
04147 Exosome [BR:
sscv04147
]
125973265
Transporters [BR:
sscv02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
125973265
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
125973265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
Motif
Other DBs
NCBI-GeneID:
125973265
NCBI-ProteinID:
XP_049583174
LinkDB
All DBs
Position
10:complement(3885128..3893976)
Genome browser
AA seq
695 aa
AA seq
DB search
MARKTVVPSVYYGEPCTFDPKFRGPIHDRELTDVVFCLILVIVIFAYIILGLVAWVNGDL
KKVTFPTDSYGTLCGEGSNKNKTKLFYIDILSCLSLDLQCPTTQLCVSECPHQFMLLLTA
VKKDDEWNYYKKFCKPGVTKSTPVPRLLANEDCPSVLLPSSAFLNRCFPIVTNQSESLEA
GDKKISAADLKNASSIAMRAKDISAKVFEDLAASWEWILTGMAISMVISLIFLLLLRFIA
GVLLWLIVGAIVGAIGYGIGHCYWQYTNLLGKEGADITISQIGFQADFQVYLELSQTWFI
FMIVLSVIEGVVLLILIFLRERLLISIALLKEASNAVAHIMTTLFYPIFTFWLLCLCIGY
GVVVAMCLSTSGVAVYKIKPKNSHCRLGDNTTCDPKNFSQINLPENCSNSQCFFDSYGGE
GFYHSYIMLFQVFNLFTFLWLVNFVMALSQCTLAGAFATYYWAMTKPRDIPAWPLAASFN
RTLQYHIGSLAFGALILSLVQMVRIILEYLDKKLKHGQTRCARFMMSCLKYCFWCLERFI
KFLNKNAYIMIAIHGKNFCTSSKNAFFLLMRNVIRVAVLDKVTDFLLFLGKLLIAGTVGA
LAFFFFTRKIPFLKGQAPTLNYYWVPLVAVILLSYLVAHGFFSVYSMCVDTLFLCFCEDL
ERNDGSLAKPYFMSPELCKILGKSNEVVQNDRPSE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggctcggaagacggtcgttccatccgtgtattatggtgagccatgcactttcgaccca
aagttccgagggccaattcatgacagagagctcactgatgtggtcttctgtttaatttta
gtcatcgtcatctttgcttacatcatcctgggccttgtggcctgggtcaacggcgatctc
aagaaagtcacctttccaaccgacagctacgggacgctctgcggcgaggggagcaataaa
aacaaaaccaaattgttctacattgacattctcagttgtctgagccttgaccttcagtgc
cccaccacccagctctgtgtctccgaatgccctcatcaatttatgttacttctgactgcc
gtgaaaaaagacgacgaatggaattattataagaaattctgcaaaccgggagtaacgaag
agcacgccggttcctcggctcttagccaatgaagactgcccatccgtgctcttgccgagc
tcagcctttcttaatcggtgcttccctattgtcacaaaccaatcggagtcattggaagcc
ggcgataaaaagattagcgccgccgacttgaaaaacgctagcagcattgccatgcgtgct
aaagatattagcgcgaaggtctttgaggatttagccgcttcctgggaatggatcctgact
ggcatggcaatctcgatggtgatcagcttgatcttcctcctcctcttgcgcttcatcgcc
ggcgtgctgctgtggctcatagttggtgccatcgtcggcgccatcggttatggtatcggc
cactgctattggcagtacacgaatcttctcgggaaggaaggcgccgacatcaccatctcc
cagatcggcttccaagcagactttcaagtctatctggagctcagtcagacgtggttcatt
ttcatgattgtgctatctgtgatcgagggcgtcgttctacttatcctgattttcctgagg
gagcgactgctcatctccatcgcgctgctgaaggaagcgagcaatgccgtcgcacacatc
atgactactctcttctatcccatcttcactttctggctgttatgcctctgcatcggttat
ggagtggtggtggcaatgtgtttatcaacgtccggagttgccgtctacaaaattaaacct
aaaaatagccactgccgcttaggtgacaacactacatgcgatccaaagaatttcagtcag
atcaaccttcctgagaattgtagcaactcgcaatgttttttcgactcctacggcggcgag
ggcttctaccacagctacatcatgctcttccaagttttcaacttgttcaccttcctgtgg
ctagttaactttgtcatggcgctcagccagtgcactctagctggagcctttgctacctac
tactgggccatgacgaagcccagagacatcccagcctggccgctcgctgcgtcttttaat
cgaaccttacaataccacatcggctcactggcctttggtgcactcatcctctctctggtg
caaatggtccgcatcattctggaatacctggataaaaaactcaagcatggccagactagg
tgtgctcgcttcatgatgtcctgcctcaaatattgtttctggtgcctggaacgtttcatc
aagttcctcaacaaaaatgcatacatcatgatagcaatacatggaaaaaacttctgcacc
tcctccaagaatgctttcttcctcctgatgagaaacgttattcgggtggccgtcctggac
aaggtaacggacttcttgttattcctgggaaaacttctaattgcgggaactgtcggcgcg
cttgcctttttcttcttcacccgtaaaatccccttccttaaagggcaggcgccgacctta
aactactactgggtccctctagtggcggtgattttgttatcctatttagttgcacatggc
ttttttagcgtctactccatgtgcgtggacacattgttcctgtgcttttgcgaagacctg
gagaggaatgacggttccttagctaagccctacttcatgtctccagagctgtgcaagatc
ctgggcaaaagtaacgaggtcgtgcaaaacgataggccatccgaatga
DBGET
integrated database retrieval system
