Syngnathus scovelli (Gulf pipefish): 125973352
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Entry
125973352 CDS
T08785
Symbol
kalrna
Name
(RefSeq) kalirin isoform X1
KO
K15048
kalirin [EC:
2.7.11.1
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sscv01001
]
125973352 (kalrna)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125973352 (kalrna)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125973352 (kalrna)
Enzymes [BR:
sscv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125973352 (kalrna)
Protein kinases [BR:
sscv01001
]
Serine/threonine kinases: CAMK group
Trio family [OT]
125973352 (kalrna)
Membrane trafficking [BR:
sscv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125973352 (kalrna)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125973352 (kalrna)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin
SH3_KALRN
Spectrin_6
SH3-RhoG_link
PH
SH3_2
IQ_SEC7_PH
Spectrin_SESTD1
CRAL_TRIO_2
SH3_1
PH_19
RHG20_PH
PH_10
SH3_9
T4_Rnl2_C
Motif
Other DBs
NCBI-GeneID:
125973352
NCBI-ProteinID:
XP_049583381
LinkDB
All DBs
Position
8:13518134..13575261
Genome browser
AA seq
2383 aa
AA seq
DB search
MNPVEAAEEAPSDPDTDAFFKTGSLRTEGIKASDVLPVLKEKVAFVSGGRDKRGGPILTF
PARSNHDRIKQEDLRRLVTYLSTVPSEDVCKRGFTVIIDMRGSKWELIKPLLKTLQEFFP
VEICVALIIKPDNFWQKQKTNFGSAKFSFETSMVSVEGLAKLVDPSQLTDDFEGSLDYNH
EEWMDLRVSLEEFMSNAVHLLARLEDLQEVLSKKEFPSDVEGSRRLIEEHTQLKKKVLKA
PVEDLDREGQRLLQCIRCSDGYSGRISGSADFQSLVPKVASLLDKLHSTRQHLHQMWHVR
KLKLDQCFQLRLFEQDAEKMFDWISHNKELFLQSHTEIGRAYQHAAELQTQHNHFAMNSM
NAYVNINRIMSVASRLAEAGHYASTQIKQISSQLDLDWKSFAAALDERSTILAMSAVFHQ
KAEQFLSEVEAWCKVCSEGGLPTEMQELELAIHRHQSLYEQVTQAYTEVSQDGKALLDVL
QRPLSPGNSESLTATANYSKAVHCILDVVHEVLHHQRRLENIWQHRKVRLHQRLQLCVFQ
QDVQQVMDWIENHGEAFLSKHTGVGKSLHRARALQKRHDDFEDVAQNTYTNADKLLEAAE
QLAQTGECDPEEIYKAARHLEVRIQDFVRRVEHRKLLLDMSVSFHTHTKELWSWMEELQK
QLLDDVSCDSVDSVQTLIQQFQQQQTATLEATLNVIKEGEELMQQLRDAAMSTNKTPHCS
SIAHIQGVLQQLDEAQGQMEELFHERKIKLDIFLQLRVFEQYTIEVTAELDAWNEDLSRQ
LNDAGRSSGSGGSSGGSGGSSGASSGGAEDIGLAEQRLKRHAERKAAMNNMTYEVMQQGQ
DLHQYIMEVQASGIELTGEKDMDLASQVQELLEFLHEKQQEVELSAQHTHARLEQNLQLR
HLQAEVKQVLGWIRNGESMLNASMVNASSLSEAEQLQREHEQFQMAIESLFHANSLQKTH
QSALQVQQKAEMMLQAGHYDPEAIRNCAEKVAVHWQQLMLKMEDRLKLVNASVAFYKTSE
QVCSVLESLEQEYRRDEDWCGTHEKVGTPADCDHLVPLISKHLEQKEAFLKACTLARRNA
EVFLKYIHRNNVSMPGAASHARGPEQQVKAILNELLQRENRVLHFWTLKKRRLDQCQQYL
VFERSAKQALEWIQETGEVYLATHVSSGDSSKETQQLLNDHHHFRLTAKQTKEKVKLLIQ
LADNLVEKGHVHVVELKRWVSTVDRRYRDFSLRMAKYQESLEKSLGVSSEDNKDLELDII
PASLSDDPEIKLREPSDEVNEEKRKSARKKEFIMAELLQTEKTYVRDLQECLETYLCEMT
RGGDEIPPAIANKEHVIFGNMQEIYDFHNNIFLKELVNYEQLPEDVGHCFVTWADKFHIY
VDYCKNKPDSSQLILEHAGTFFDDIQQRRGLANSISSYLIKPVQRITKYQLLLKELLSCC
EEGKGEIKDGLEVMLSVPKRANDAMHLAMLEGFEENLEVQGELILQDSFQVWDPRSLIRK
GRDRHLFLFEFSLVFSKEFKDSAGRTKYQYKHRLLTSELGVTEHIEGDPCKFALWAGRTP
SSDNKTVLKASSVEAKQEWIKNIREVIQERMTHLKGALKEPVHLPKTATLTKPRNNAKRD
GGEDGDSQGDGSSQPDTISIASRTSQNTMDSDKLSGGCELTVILQDFTAGCSSEISVSTG
QTVELLERPSERPGWCLVRTTDRNPPQEGLVPSSALCVSHSRSSVEMDCFFNSGKENFPV
GGSDGKTESVANLQPQPSLNSLQSNSPGPKRSGNTIRKWLNPVRRLSHGSSVKKLPSNKQ
KKTGPVGGRDESRKGQPDLNPQDDIIDEHIPSKAGNILSKTPSGMQSGGEEEQDEEAHTP
LPPPMEIIKDPSTQDNKNLEPGAHPAFSPLSSGEQSTSVQARNTELEERAQAMKQRMYVL
EELIETEKIYVKDLGIFVKVFKERIEQTIPEDMKGKDKIVFGNIHQIYDWHKNFVGELEK
CLDDHEYLAELFIKHERKLHMYVVYCQNKPKSEFIVAEHDTFFDGVQRDIESRLTISDYL
IKPIQRITKYHLLLKDFLKYSNKAGMDCKQIRQALDLMSQVPKRCNDMMNLGRLQGYEGN
LINQGKILEQETFYVTEQVGSVLSRAKERRVFLFEQIVIFSELLHKGSSTPGYQFKNCIK
VSYLDLEQTVDNDQTKFVLSCRGSAEHFTLQAPNVEIKQVWVRQIQKLLDDQSCFLSALV
SPIEYQQKRGGSSSLTRNRSAASNRSSTPSHSRPSSAVGLGEKESEKGRSQLTTSTSNGG
TSCFDSRESDGGCCNGASSTMRVAQDYSALKENEICVSQGETVQVLATNQQNMYLVYRPA
DSQSPAAEGWVPGHVLGPAHKPLKDSSSATSFSAAVADANNIK
NT seq
7152 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgtagaagcggccgaggaggcgcccagcgaccccgacactgatgcattcttc
aaaacagggtctctgaggactgaaggcatcaaagcgtctgatgttctccctgtcttgaag
gagaaagtggcctttgtgtccggtgggcgggacaaacgaggaggacccatcttgacgttt
cctgcacgaagcaaccacgaccgaataaaacaggaggacctgaggaggctggtcacatac
ttgtctactgttcccagcgaggatgtgtgcaaaagaggcttcactgtcatcattgacatg
cggggctccaagtgggagctaatcaagcctctgctgaagacgctgcaggagtttttcccg
gttgagatatgcgtggcgctcatcatcaaaccggacaatttctggcagaagcagaaaact
aacttcggcagtgcaaagttctcctttgaaaccagcatggtgtcagtggaaggtctggcc
aagttggtggatccatcgcagctgacagatgactttgaaggctccctggattacaaccat
gaggagtggatggacctgagagtctccttggaggagttcatgtccaacgcggttcatctc
ctggcccgattggaggatttgcaggaggtattgtccaagaaagaatttccctccgatgtc
gaaggatcccgtcggcttatagaagagcacacgcagctgaaaaagaaggtcttgaaggct
cctgtggaagatctggaccgggaaggccagcgcttgctacagtgtattcgatgtagtgac
ggttactcgggaagaatctccggctctgctgacttccaaagcctcgtgcccaaggtggcc
agtctgctggacaagcttcactccaccaggcaacatctccatcaaatgtggcatgtccgc
aagctgaagttggaccagtgtttccagttacgactctttgaacaggacgcagagaaaatg
tttgactggatcagccacaacaaggaattgttcctgcagagccatactgagatcggccga
gcgtaccaacacgcggccgagctacagacgcagcataaccactttgccatgaactcaatg
aatgcttacgtgaacatcaacaggatcatgtcggtagcgagtcgcttggcggaggcggga
cattacgcctccacgcagattaaacagatatcaagtcaactggatctggactggaaaagc
tttgccgccgctctagatgaacgctctaccatccttgctatgtctgctgttttccaccaa
aaagccgaacagttcttgtcagaggtggaggcatggtgcaaggtctgcagtgaggggggg
ctcccaaccgagatgcaagagctggagctggccatccaccgccaccaaagcctctatgag
caagtcacccaggcttacactgaggtaagtcaggatggaaaagctctcctggatgttctc
caaagacctctcagtcccggcaactcagagtctcttacagctactgccaactactccaaa
gcggttcattgtatactggatgtggtgcatgaagtacttcaccatcagcgccgtctggag
aacatttggcagcaccgaaaggtccgactgcatcagagactgcagctgtgtgtgtttcag
caagacgttcaacaggtgatggactggatcgaaaaccacggcgaagctttcctcagcaaa
cacacgggagtgggaaagtctcttcatcgagctcgtgccctgcagaaacgacatgacgac
tttgaggacgttgctcagaacacgtatactaatgcagacaagctattggaggcggccgag
cagctggcccagacgggcgagtgcgacccggaggagatctataaggcggcgcgccacctg
gaagttcgaatacaagactttgtacgccgtgttgagcacaggaaactgctgcttgatatg
tctgtgtccttccacacgcacactaaagagctgtggtcttggatggaggaactccaaaag
cagctgctggatgacgtgagctgcgactctgtagattcggtgcagacgctcattcagcag
ttccagcagcagcagacagccactttggaagccacgctcaatgtcattaaggagggggag
gagcttatgcagcagctcagagatgctgccatgtccaccaataagacgccacactgcagt
tccatcgctcacattcagggcgtgctgcagcaattggatgaagcccagggccagatggag
gagctgttccatgagcgcaaaatcaaactcgacatattcctccagctacgcgtctttgag
cagtacaccatagaggtgacggccgagttagacgcctggaacgaggacctctctcgacag
ctaaacgatgcgggacgctcgagcgggagcggaggcagtagtggcgggagcggagggagc
agcggcgcttcctcgggtggagcggaggatattggcctggctgagcagaggctgaagagg
catgctgagaggaaggcagccatgaacaacatgacctatgaagtcatgcagcagggtcaa
gacttgcatcagtacatcatggaggtgcaagcctcaggcattgagctgactggggagaag
gacatggacttagcctctcaggttcaggagctgctggagttcctccacgagaaacaacag
gaagtggagctcagtgctcaacatacgcatgctagactggagcagaacctgcaactgcgt
cacttgcaggctgaggtcaaacaggtgcttggatggatccgtaatggcgagtccatgttg
aacgccagcatggtgaatgccagctcgttgtctgaagcagagcagctgcagagggagcac
gaacagttccagatggccatagaatctctcttccatgctaactcccttcagaagacccat
cagagtgctctgcaggtccagcagaaagcagagatgatgcttcaggccggccactatgac
ccagaagccatccgtaactgcgctgagaaagtggccgtccactggcagcagctgatgctt
aagatggaggaccgcctgaagctcgtcaacgcatccgtggccttctacaagacgtccgaa
caggtttgcagcgtgttagagagcctggagcaggaataccgacgggatgaggactggtgc
ggaactcacgaaaaagtgggaacgccggccgactgtgaccacctcgtgcctctgatcagt
aaacacctagagcagaaagaagctttcctaaaggcgtgcacactggccaggaggaacgct
gaggttttcctcaagtacatccacaggaacaacgtgagcatgccaggagctgccagtcat
gccagaggccctgagcagcaggttaaagctattctcaatgagctgctgcagagggagaac
agagtcctgcacttctggactctgaagaagagaagactggaccaatgtcagcagtatctc
gtctttgaacgtagcgccaagcaggccctcgaatggatccaggagacgggtgaggtttac
ctggctacacatgtgtcatctggtgacagcagcaaggaaacacaacagctcctcaatgat
catcatcactttcgcctcactgccaagcaaacaaaggagaaggtgaagctccttatccag
ctggccgacaacttggtggagaaaggccacgtccacgttgtggagctgaagcgatgggtg
agcacggtagatcgccgctaccgagacttctccctgcggatggccaagtatcaggagagc
ctggagaagagcctgggtgtctcctccgaggacaacaaggaccttgagttggatattatt
cctgccagcttgtcagacgaccccgagatcaaactgcgggagcccagcgatgaggtcaat
gaggagaagaggaagtcggcgaggaagaaagagttcatcatggccgagctgctgcagaca
gagaagacctacgtcagagatctccaggaatgtctggagacctacttgtgcgagatgacc
cgcggcggggacgaaatcccacccgccattgccaacaaggagcacgtcatcttcggcaat
atgcaggagatctacgacttccataacaatattttcttgaaggagctggtcaactatgag
cagctgccggaggatgtgggtcattgcttcgtcacatgggctgacaagttccacatttac
gtggattactgcaagaacaaaccggattctagccagctcatcctagagcacgccggcact
ttttttgatgacattcagcagcgacgcggcctggctaactccatctcgtcttacctcatc
aaaccggtgcagagaatcaccaagtaccagctgctgttgaaggaattgctgtcatgttgc
gaggagggcaaaggggagatcaaagatggcctggaggtcatgcttagcgtgcccaagagg
gccaatgacgccatgcacctcgccatgttagaaggttttgaggaaaacttagaggtgcag
ggcgaattgattttgcaagacagcttccaggtttgggatccgcgctcactcatccgaaag
gggcgggaccgacacctcttcctctttgaattctcgctggtcttcagcaaggagttcaaa
gactcggcgggcagaaccaaataccagtacaaacacagactactgacttcagagttgggg
gtgacagagcacatagaaggcgacccatgtaaatttgcactctgggccgggcgaaccccc
tcctctgacaataaaactgtactgaaggcgtccagcgtagaagccaaacaggagtggata
aagaacatcagagaggtgatccaggagagaatgactcacctcaaaggagcattaaaggag
cccgttcacctccccaaaacggcaacactcaccaaacctcgcaataacgccaagagggat
ggaggggaggacggagacagtcagggagacggcagcagccaaccggacaccatctccatc
gcatccagaacctcgcagaacacaatggatagtgacaagctctctggtggttgcgagttg
acggtgatcctgcaggacttcacggcaggatgtagcagtgagatatccgtcagcaccggc
cagacagtagagctgctggaaaggcccagcgagcggccaggttggtgtctggttcgaacc
accgaccgcaacccacctcaggagggtctggtacccagttcggcattgtgtgtgtcccac
tcgcgctccagtgtggaaatggactgcttctttaactcagggaaagaaaactttcctgtc
ggtggctccgatgggaaaactgagtcggtggcaaacctccaaccgcagccgtccctcaac
tcactgcagtccaactcacccggacccaaacgctccggaaacaccatccgaaaatggctg
aatcccgttcgacgcctcagtcacggcagctcggttaagaaactccccagtaacaaacag
aaaaagacaggtccggtgggaggaagagatgagagcaggaagggacagcctgaccttaac
ccacaggatgacatcattgatgagcacatccccagcaaagcgggtaacatcctctccaag
acgccatctggcatgcagagcggcggcgaggaggagcaggatgaggaggcgcacaccccg
ctgcctccgcccatggagatcatcaaggacccctcaacgcaagataacaagaacttagaa
ccaggagcacacccagccttttcccccctctcctcaggggaacaaagcacttcggtccag
gcccgaaacactgagttggaagagagagcccaagccatgaagcagcgcatgtacgttctc
gaggagttaatagagacggagaagatctatgtcaaagacttgggcatctttgttaaggtt
ttcaaggagagaatagagcaaactattcccgaagacatgaaaggaaaagacaaaattgtt
ttcggcaacatccatcaaatctacgactggcacaaaaactttgtgggagagctggagaaa
tgtctggatgaccacgagtacctcgccgagctcttcatcaaacatgagagaaaactgcac
atgtacgtggtctactgtcagaacaaacccaagtccgagttcattgtagcagaacatgac
actttttttgacggtgtccagcgggacattgagtcccggttgaccattagcgattacctt
atcaaacccatccaaagaatcaccaaatatcacctactactgaaggatttcctgaagtac
agcaacaaggcgggaatggactgtaaacaaatcaggcaagcattggatttgatgtctcag
gttcccaagcggtgtaacgacatgatgaacttaggtcggctacaaggatacgagggcaat
ctaatcaatcagggcaaaatactggagcaggagactttctacgtgaccgagcaagtcggc
agcgttttgtcgcgcgccaaagaacggcgggtgttcctcttcgagcaaatcgtcattttc
agtgagctgctccataaaggctcttccacgcccggatatcagttcaaaaactgtatcaag
gtgtcctacttggatctggagcagaccgtggataacgatcagaccaagtttgtcttgtca
tgtcgcggctcggcggaacattttaccctccaggcgcccaatgttgaaatcaagcaggtc
tgggtcagacagatccagaaactactggacgatcaaagctgcttcctgtccgcacttgtg
tctcccatcgagtaccagcagaagcgcggcggcagctcgtcactaaccagaaaccgctca
gctgccagcaatcgctcatccacgccctctcacagccgcccctcgtcggcggttggcctt
ggcgaaaaggagagcgagaaggggcggagccagttgaccacgtcgacttccaatggagga
acatcgtgttttgactccagggagagcgacggcggctgctgcaacggcgcctcgtcaacc
atgcgtgtcgcccaggactactcggcgctcaaggagaatgagatatgtgtgagtcagggc
gagacggtgcaggtcctggcgaccaatcagcagaacatgtacctcgtttaccggcccgcc
gacagccagtcacccgctgccgagggctgggtgccggggcacgtcctgggccccgcccac
aagcccttaaaagactcctcctccgccacgtccttctctgcggcggtggccgacgccaac
aatatcaagtaa
DBGET
integrated database retrieval system
