Syngnathus scovelli (Gulf pipefish): 125973353
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Entry
125973353 CDS
T08785
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125973353 (si:dkey-183n20.15)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125973353 (si:dkey-183n20.15)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125973353 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
zf-C3HC4_2
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
125973353
NCBI-ProteinID:
XP_049583386
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All DBs
Position
10:complement(3875747..3878217)
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AA seq
233 aa
AA seq
DB search
MNISKISMIRWRQFPSQDPTGQGHPVQGQTPPSMVQECLQLCPPTSHRERHCPVCLQPAS
FPVQTNCGHLFCAPCLIAYWRHGTWLDAVNCPLCRQKVSVMCQLFNESRPDQQSKDVLSQ
ISDYNKRYSGAPRRIRDYLSDAPVLLQLAFRSPGTSGGLVCLFFLRVAVCCAGAAVAAAS
PTGSPKAPLSLSGLLGLMDDLVVVVLLLLCILNVNHQMVPERGRSAGTRIVAS
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctccaagatctccatgatcagatggcgccaatttccttctcaagatccaacg
ggtcagggtcacccagtccaaggccagacaccaccaagcatggttcaggaatgtctgcag
ttgtgtccaccgacaagccaccgagagcgacattgtccagtgtgccttcagccggccagc
tttcccgtgcagaccaactgcggacatctattctgcgctccatgtttgatcgcctattgg
aggcacgggacgtggttagatgcagtcaactgtcccctctgtaggcaaaaggttagcgtc
atgtgtcagctgtttaacgagagccgaccggaccagcagtccaaggacgttctgagccaa
ataagcgactacaacaaacgctattctggagcgcccagacggatacgagactacctgtca
gacgcgcccgtcctcctgcagctggcgttccgtagtccgggcacctcaggtggtttggtg
tgtctcttcttcttgagggtggcggtgtgctgcgcaggcgccgccgtcgccgcagcctct
ccaacgggttccccgaaagcacccctgtccctaagcggccttttggggctgatggacgac
ctggtggtggtggtcttgctccttctgtgcatcctcaacgtcaatcatcagatggtgccg
gagagagggcgctccgccggcaccagaatcgtggccagctag
DBGET
integrated database retrieval system
