Syngnathus scovelli (Gulf pipefish): 125973360
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Entry
125973360 CDS
T08785
Symbol
ppp1r9ala
Name
(RefSeq) neurabin-1 isoform X1
KO
K17551
neurabin
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sscv01009
]
125973360 (ppp1r9ala)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125973360 (ppp1r9ala)
Protein phosphatases and associated proteins [BR:
sscv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125973360 (ppp1r9ala)
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
125973360 (ppp1r9ala)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ_5
SAM_2
PDZ
SAM_1
PDZ_6
PDZ_2
SAM_PNT
Dsc3_C
SAM_KIDINS220
Motif
Other DBs
NCBI-GeneID:
125973360
NCBI-ProteinID:
XP_049583405
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All DBs
Position
8:complement(8830630..8844165)
Genome browser
AA seq
1381 aa
AA seq
DB search
MIQAESKGSERTLRSASPHRNAYKSDFHAIKCSFDGSKSEGAAKSYANGSSDAREDSRGR
PFGTRVNKIKNIFLQMDGQQQEEQPPQDVKATLKSDAAQVTPPKPQIPLSSHRVNFNSLT
SPESLNLDKTPKGDDVEIDKVALAEKFSVTRKIFERGIAEQPAVDKHSPNRLVNRLSLGS
ASDEGKTARRASGSSETFKLEQTSPTGVKCRPDVENEKKNMPRVSKRLENFMAGNDSEDN
NKAAAKGGTMTAKLDSMTEHSIQTSPTRGSLHKATSVKEAVNVDAAKKLKATCVTNKTSS
KSTLPVSNTAYKSISTTTDGIPKPEPTSPLGHGYKRHSGDGLAQTSVVGDKSKPPSDGRQ
QTSAFENTYATTSIEKAKSNNSVVQSPTREKTSTIASKGVGVVRAELVVVQNESSGSEDN
EDEDVEDDVFVSQKNKSPSEDETNKCQPGKLKTKDSVLDGNIQGIKDEHDERELDEQGDK
TVVNGAPVYGIENAAFVDDKDVDQVLLEDEEQEEEEDQEEEMYTEYDDYYEAPGLSDEET
PPPKRKIQFSADPILVFSTFSNEEYDRRNDDVDPVSASAEYELEKRVEKMDVFPVEIEKG
DLDDTRADSPRDNGLGISIIGMGVGADQGLEKLGIFVKTITEHGAAEKDGRIEVNDQIVE
VDGVSLVGVTQLFAATVLKNTKGTVSFLIGREKPGTQSEVARLISETLEQERNQHHQEQR
QHHHHLDDPYEHSTEEEERFEDDDDAVNERILGSNFSPGRKVEVFELPDSEALFMPTNMD
SSQMAFKFKELQLKHSVASAEINQLKEKLRESEEDRSLWEARKSVLEQKFEDSNEKILKL
ETYWLETQALCKTINEQLAETQAQYETLDKKYNKAKKLLKDYQQKEIDFVKKEEELKKTI
DENERMYKEQLESLQNRIAVLESGVDLQNMAENHLCSQKSVDSLAEEDWKELVPETELLD
TSAHKAKGLLGQKAKRQRPSRNKLKETLALSPSHSQETEEEDEREERELQRRRSFQESLS
LPVPVFYPKNEQKDDAAETKEELAGKTELSKSPSLSPSQGGSIESGGGQSLLALNDSSIV
ASPSGLTHNVKKKESKVKEKVLKDEIIEPTSATKPKRRFPDFGGLRKSGGKGRKHDKEAM
RMSLDSRGSAELLEDSGGNLSPAESMTSIPTCMPFSWFGDKEKERDREPSSSSSSLPYTE
SNSEPSQDRKNKTNLSWSSLFSRSLDLSLSVIDDCNLASPSSDLSGLVAEPNLSGRSHTL
IFSSSESLDDEPVTTGKEYQWQNRPVGDWTNQQVCHWLMGMNMDQYTVEFTAKGVDGQQL
LQLDSDKLKVLGVSSQSDRSTIKKKLKEMRKAQEKLEKQREKREKENRRSGRLPINTDSV
C
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagcagaaagtaaaggaagtgagaggaccctgaggagcgcctccccccacaga
aatgcatacaagtccgacttccatgctatcaaatgctcctttgatggctccaaatcagaa
ggtgctgccaagtcgtatgcaaatggctccagcgacgcccgcgaggactcccggggacgg
cctttcggtaccagggttaacaagatcaagaacattttcctacagatggacggccagcaa
caagaggagcagccgccgcaagacgtgaaagcaactttaaagtctgatgctgcccaggtg
actccaccaaagccacaaattccactcagctcacacagagttaacttcaacagcttgaca
agcccagaatccctcaatttagataaaactcccaaaggggatgatgtggagattgacaaa
gtggctttggcagaaaagttttctgtgaccaggaagatatttgagaggggcatcgccgag
cagcccgctgttgacaagcattcgccaaacagattagtcaaccgtctatctctcggaagt
gcatctgatgagggcaaaactgcacggagggcatcgggatcttcagagactttcaaattg
gagcaaacatctccaacgggcgttaaatgtcgaccggatgttgagaatgaaaaaaagaac
atgcccagagtgtcaaaacggttggagaattttatggctgggaatgactcagaggataac
aacaaagctgctgccaaaggagggacgatgactgctaaattagacagtatgactgaacac
tcaatccagacttctccaacaaggggcagcttacacaaagccacttctgttaaggaagcc
gtgaatgttgatgctgctaaaaaattaaaagcaacatgcgtcacaaacaaaacgtcaagt
aaatccacacttccagttagtaacacggcttacaaatcaatttccaccacaactgacggc
attcccaaaccagaaccgacaagcccgcttggccatggctacaagcgacactccggggat
ggattggctcagacatctgttgtcggggataaaagcaaacccccaagtgatgggaggcag
caaacgtctgcctttgagaacacctacgcaaccacatctattgaaaaggccaaaagtaac
aacagtgtggttcaaagtccaaccagggaaaaaacctcgacaattgcctccaaaggggtc
ggcgtggtccgggcagagcttgtcgtggttcagaatgaatcttctggtagcgaggacaat
gaagatgaggatgttgaagacgacgtgtttgtttcgcaaaaaaacaaaagcccatcagaa
gatgagactaataaatgtcaaccgggaaaactgaagactaaagactctgtcttggatggt
aacatacaagggattaaagatgaacatgatgagagagagctggacgaacagggtgacaag
accgtcgtaaatggagccccggtttatggtatcgagaatgcggcctttgtggatgacaag
gatgtagaccaagtcctactggaagatgaggagcaggaagaagaagaagaccaggaggag
gagatgtacacagagtatgatgactattatgaggccccgggattgtcagacgaagagaca
cctccacctaagaggaaaatccagttttccgcagatcccattctggtcttcagtaccttc
tctaatgaggagtatgatcgacgcaatgatgatgtggaccctgtttctgcatctgctgaa
tatgagctggagaaacgagtggagaagatggatgtattcccggtggaaattgagaaaggt
gatcttgatgacactcgagcggattccccaagggacaatggcctcggcatcagcatcatt
ggaatgggagtgggagctgaccagggactagagaaacttggcatttttgtcaaaaccata
acagagcacggagcagctgaaaaagatggccgcattgaggtaaatgaccagatagtggag
gtggatggcgtcagtctggtgggtgtcacccaactctttgcagcaactgttctcaagaac
accaaaggcaccgtgagttttctgattggtcgggaaaagccggggacacagagcgaggta
gcccggctcatcagcgagacgctggaacaggagaggaaccagcatcaccaagagcagagg
cagcatcaccaccacctggatgatccctatgaacactccacagaggaggaggagcgcttt
gaggatgacgacgacgcagtgaatgagaggattcttggctccaatttttctccggggcgg
aaagtcgaggtgttcgagttgcccgactcggaggctctgtttatgccgactaatatggac
agctctcagatggccttcaaatttaaagagctgcaactcaaacacagcgttgcatcagca
gaaattaatcaactgaaggaaaagcttcgggaatccgaggaggacagatcactgtgggaa
gccagaaaatctgtactggagcaaaagtttgaagatagcaatgaaaaaatcctcaaattg
gagacttattggctggaaacccaggctctgtgcaagacaataaacgaacagttagcagaa
acccaagcccagtatgagaccttggacaagaaatacaacaaggcaaagaagcttctaaaa
gactaccagcaaaaagagattgactttgtgaagaaagaggaagagctgaagaagactata
gatgaaaacgaaagaatgtacaaagaacagctggagagcttgcagaataggatagctgtc
ctggagtctggtgtggatctacagaatatggcagaaaatcacctttgctcccaaaagtca
gtggactcacttgcagaggaagactggaaggagcttgtgcctgagacggagctgttggac
accagtgcacacaaagcaaaaggcctgttgggccagaaggccaaacggcagcgtccctct
cgcaacaaactgaaggagactctcgcgctgtccccgagccactcgcaggaaactgaggag
gaggatgagcgggaggaacgggaacttcagagaaggaggtccttccaggagagcctgtcc
ctcccagtaccagtcttctatcccaagaacgaacaaaaagacgatgcggccgaaacaaaa
gaggagctggcgggcaagacggagctctccaaaagcccgtctttatcgccgtcacagggt
ggcagtattgaaagcggcggaggccagtctttgctagctctcaatgactcctcaatcgta
gcatccccttcgggattgacgcacaatgtcaaaaagaaggaatccaaagtcaaggaaaaa
gtgctcaaagatgaaataattgaacccacatcagctacaaaacctaaaagacgctttccc
gactttgggggcctgcgcaagtcgggcggcaaaggaagaaaacacgacaaggaggccatg
agaatgtctttggacagcagggggtccgcagaattactggaagactctggcggtaacctg
tccccagctgaatccatgacctccatcccaacctgtatgcccttctcttggtttggagac
aaagagaaagagcgagacagggagccgtcttcctccagcagtagcctgccctacaccgag
agcaacagtgagccaagccaggatcgcaagaacaagacaaatctctcctggtcgtcttta
ttcagtcgctcgttagatttgagtttgtcagtcatagatgattgtaacctcgccagtccc
agttcagacctctctgggttagtcgctgaacccaatctgtctgggcgctcacacacttta
atcttctcttccagcgagagtctggatgatgagccagtgaccacgggaaaagaataccag
tggcagaaccgtcccgttggtgactggaccaatcaacaggtgtgtcactggttaatgggc
atgaacatggaccagtacacggtggaattcaccgccaagggggtcgacgggcagcagctt
ctgcagctggacagtgacaagttaaaggtgctgggtgtgtccagtcagagcgaccgatcc
actatcaagaaaaagctgaaggaaatgcgcaaggcccaggagaagctggagaagcaacgg
gagaaacgagagaaggagaaccgccgtagcggacggctgccgatcaataccgactctgtc
tgctga
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