Syngnathus scovelli (Gulf pipefish): 125973382
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Entry
125973382 CDS
T08785
Symbol
nup62l
Name
(RefSeq) nucleoporin 62 like
KO
K14306
nuclear pore complex protein Nup62
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125973382 (nup62l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125973382 (nup62l)
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125973382 (nup62l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Exonuc_VII_L
DUF4164
Motif
Other DBs
NCBI-GeneID:
125973382
NCBI-ProteinID:
XP_049583466
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Position
8:complement(8823775..8826213)
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AA seq
555 aa
AA seq
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MSGAFNFGQPSTGFGFGTAKTTAPAAPATGFGLTTTSTPAAAGSSGGGSFSFGLSTQPAA
SSAPTGGGGGFSFGTPAKSTAAGGSLAFGTPTATTFSLGSTPQSTPAAGLSLAVSSSGFN
LTSGAPAGGGFSFGTPVPTQPVAAASATPAPAAPAGGGFSFGIPVPTQPAAAVAPTTNAS
GGLPFGAFGFGGSKVQVTTATATTSALGGGFSFGSSAAPNLTLGPQTISTTIASAPQAGG
FTLGIKPSPTPAPPAVTPVAPSLFSTPTSTAAVPATGSGFSFGATPTPAAAPTATTTTAG
GGVSFTLKPLGAVTTTAAVPASTALATTTTSSFSLGLKPVITTTAVTVATTLPTTTAPAV
MTYAQLEGLLNKWSLELEDQDRHFLQQATQVNAWDRMLVENGEKITSLHKEMEKVKLDQK
RLNQELDFILSQQKELEDLLCPLEESVKEPSGTIYMQNADEERERTYKLAENVDAQLKRM
SQDLKEIIEHLNTSSGPADTSDPLQQICKILNAHMDSLQWIDQNSILLQRRVEEVSKLCD
NQRKEQEKPFRLTFD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgccttcaacttcggacagccttccacgggctttggttttggcaccgccaag
accacagctccagcggcacccgccacaggattcggcctgaccacaacgtccactcccgca
gccgccggaagcagcggcggtggcagcttctccttcggcttgtccactcaacccgccgct
agtagtgcaccgaccggcggcggcggcggctttagtttcggcaccccagcgaagagcacc
gctgccggtgggagcctcgcatttggaacccccaccgccactaccttcagcctaggttca
actccgcaatcaaccccggctgcaggtctctcactggcggtttcatcgtctggcttcaat
ctgacctcgggtgcgcctgcagggggaggcttctcctttgggaccccagtgccaacacaa
ccggtagcagcagcgtcggctacgcctgcgcctgctgcgcctgcagggggaggcttctcc
tttgggatcccagtgccaacccaaccggcagcagcagtggcacccacgacaaatgcatct
ggaggtctcccatttggagcgttcggctttggtggaagcaaggtccaagtcaccacagcg
acagccacaacaagcgcactagggggtggcttctcttttgggtcaagtgctgctcctaac
ctcacactgggtccccaaaccatctccaccactatagcctcagctccacaggctggaggt
ttcaccctggggattaaaccctcaccaaccccggctccccctgcagtgaccccagtggct
ccatctctgttctcgaccccaacatcaacagctgcagtccccgcaacagggtctggtttt
agtttcggcgccactccgactcctgctgcggcaccgactgcaacgaccaccacggctggc
ggaggcgtgtcattcacacttaaacctctcggagcggtaaccaccactgccgccgtgccc
gcctccaccgccctggctacaaccaccacatcaagcttctcactgggactcaaacctgtc
atcaccacgactgcagttacagtggccaccaccctcccgaccaccactgcccctgctgtg
atgacctatgcccaattggagggcctcttgaataagtggagcctggagctggaagatcaa
gacagacacttcctccagcaggccactcaagtcaacgcatgggaccgaatgctggtggag
aatggcgagaagatcacgtccctgcacaaggaaatggagaaggtgaagctggaccagaaa
aggctcaaccaggagctggacttcatcctgtcccagcagaaggagctggaggatctgctg
tgcccgttggaggaatctgtcaaagagccgagcggcaccatctacatgcaaaatgcagac
gaggagcgtgagaggacgtacaagctcgcggagaacgtggatgcgcagctcaagaggatg
tcacaggacctgaaggagatcatcgagcatctcaacacgtccagcggtcctgccgacacc
agcgacccgcttcaacagatttgcaaaatcctcaacgcccacatggattccctgcagtgg
atcgaccaaaattccattctcctgcagagacgagtggaggaggtgtccaaattgtgtgac
aaccaacgcaaggagcaggagaagcccttccggttaacctttgactga
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