Syngnathus scovelli (Gulf pipefish): 125973459
Help
Entry
125973459 CDS
T08785
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125973459 (stxbp5l)
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125973459 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
125973459 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40_Prp19
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_EML
Lgl_C
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Beta-prop_VPS8
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
125973459
NCBI-ProteinID:
XP_049583567
LinkDB
All DBs
Position
8:10390252..10454187
Genome browser
AA seq
1269 aa
AA seq
DB search
MKKFRKVLDGLTTSSPGGGTMGSPSCGSTAGTPTAAPTPKEIDVQETLVSENFQLCKTVR
HGFPYQPTALAFDPVQKILAIGSRSGGVRILGRPGVDCFCQHESGAAVLQLQFLINEGAL
VTACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIES
FILSGYVIMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLVGFESGTIVQWDLRAKKADFR
IYYDEAIHSVCWHHEGKQFMCSHSDGSLTLWNLRNTSKPIQITFPHGKIQKDGRKESCKP
ILKVDYKTSRNSEPFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYPIVEFMTLCDTP
YNNEVQDPYAVVVLLEKDLIVVDLTQSNFPVFENPYPMDIHESPVTCTAYFADCPPDIIP
VLYSIGAKHKKTGYSQKEWPVSGGMWTLGSHTYPEIIITGHADGSIKFWDASAITLQMLY
KLKTSKVFEKPKQNEGRGAELVDDDPFAVQMVSWCPQSRIFCVVGISAHIILYRFSKYDA
NTQIVSLEVRLQCDPEDVISPSENENNPCFSEPQSGSHSPQPHHPVSPGGGTPESLKDCT
PCLKVKDRAVRVPPGYQAELVIQLPWIDGEPPQQVSSLDINSAYGLLAFGNCNGLAVVDY
LQKTILLCMSTLDLYGAADPYQRLTRSPRRNRQSTSDFCMRGLSNFYSDSKKRIRTSYQS
LTELSDNQQSVDMERSKSPTSVHYPTSLHNDPRVLPEPVASLRASHCSPVFYLLDNVKGP
GRKLSLPTDLKTDLDHVNGHCTSPTSQPCSAGKPRVPMGPEGPRLARRGPGRPPFRKAQS
AACMEISLPVSHTEGYASRRAMLQQLHGVTMYSHDEHHTTTPYSWSDRESRENSFSRSRS
SSVSSIDRDTKEAITTLQFGESFGRKSDTLPTPCLWVGTSLGMILLIPMSIPTDQEERME
EQVTIGPCGAVLMLKGSVLRFGFLDCMGALIQSPYEVWRDVNAPEDPDRPRKRKLVHFSP
SSSQDTCGEGHLAIVCSERQAKVFLMPSQSCLFVHNITESSFVLRADVVSVCNSVCLACF
CANGHVMTLSLPSLRPLMDVNYLPLTDMRIARTFCFTNGGQALYLSSPTEIQRITYSQEM
YDNLQEMLGELFTPTETPEAQNRGFLKGFFGGNAHTFDREELFGEAAAGKASRSLAQHIP
GQGGVEGMKVAASGAVGELARARIALDERGQRLGELEERTALMMTSAECFSKHAHELMLK
CKDKKWYQL
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcggaaggtgttggacgggctgaccacctcctctccaggtggcgggact
atgggatcgccgtcgtgtggtagcactgccgggacccccaccgcggcgccgacccccaaa
gagatcgacgtgcaagagacgctcgtgtcagaaaactttcagctgtgtaagacggtgcgc
cacggtttcccctaccagcccaccgctttggcctttgaccccgtgcagaagattctggca
atcggctccagatcaggtggcgttcggatactaggacggcctggggttgactgcttttgt
cagcatgagagcggtgcagctgttcttcaacttcagttccttatcaatgagggggcctta
gtcacagcttgcgcagatgacacattacacttgtggaatcttcgtcagagacgaccggct
attctgcattcactcaagttcaacagagaaaggatcacattttgccaccttccctttcag
agtaaatggctttatgtggggacggagcgcgggaacacacacatcgtcaacatcgagtcc
ttcattttatccggatacgtcatcatgtggaacaaagccatcgaattatcaacaaaaact
catccaggaccggttgttcatttgagtgacagcccaaaggatgaaggcaagcttcttgtt
gggtttgagagcgggacaatagtacagtgggacctcagggccaaaaaggctgatttcaga
atctactatgatgaggccatccactcagtatgctggcatcatgaaggaaagcagttcatg
tgcagccactcagacggcagcctgaccctgtggaacctcagaaatacctccaagcccatc
cagatcactttcccgcacggtaaaatacagaaagatgggaggaaggaatcatgtaaacca
atattgaaagtggattacaagacctcaaggaacagtgagccttttgttatcttctccggc
ggtctttcatacgacaaggccggtcgacggcctacattaaccatcatgcacggcaaggca
attacagtgctagagatggactatcctattgtggagtttatgacgctttgtgatactcct
tacaataacgaagtccaggatccgtatgcagtggtggtgcttttagaaaaagatttaata
gtggtggatctgacgcagagcaacttccctgtctttgagaacccttaccccatggacatc
cacgagtctccagttacatgcacagcttattttgcagactgccctccagacatcatccct
gtcctttactccatcggcgctaaacacaagaagaccggctacagtcaaaaggaatggcca
gttagtgggggaatgtggacgttaggctcgcacacctacccagagatcatcattactgga
catgcagatggatcaatcaagttttgggatgcatctgcaattacactgcagatgttatac
aagctgaagacctccaaggtgtttgaaaagccaaaacaaaacgagggccgtggtgcggaa
ctggtggacgatgacccttttgcggtgcaaatggtcagctggtgtccccaaagtcgcatc
ttttgtgtcgtggggatttcagcccacattatcctctaccgcttcagcaaatatgatgcc
aacactcagattgtgtctctcgaggtgcgacttcaatgtgatccggaggatgtcatctcc
ccttccgaaaatgaaaacaatccgtgcttctcagagccccagtcaggctcgcactctcct
cagccccatcacccagtgagccctggtggcggaacacccgagtctttaaaggattgcaca
ccctgccttaaggtaaaggatcgggcggtgcgggtacctcctggttaccaggcagagcta
gtcatccagctgccttggatagatggagaacctccacagcaggtttcaagcctggacatc
aactccgcctatggccttttggcattcgggaactgtaatggccttgcggtggtcgactac
ttgcagaaaaccatcctgttgtgcatgtccactttggatttgtacggagctgccgatccc
tatcaacgccttacccgctcaccccgcaggaacagacagtccacctcagacttttgcatg
cgcggcctgtctaacttttattctgattcaaagaaaaggatccgtacatcctaccagagc
cttactgaactatctgacaaccagcagtctgttgacatggagagaagcaagtcgcccacc
tcagttcattacccaacctcccttcacaatgacccacgcgtcctgccagagcctgtggcc
agtctgagagccagccactgcagcccagtcttttacttattggacaatgtaaagggaccc
ggcagaaagttaagtctgccaacagatcttaagaccgatcttgatcatgtcaatggacat
tgcactagccccacctcccagccctgctcggcggggaagcctcgcgtcccgatgggtccc
gaggggccacggcttgcccgcagaggccctggccgaccgccattccgcaaggcccagtct
gctgcttgcatggagatctctttgcctgtgtcccacactgaaggttatgcatccaggagg
gcaatgctccagcagttacacggagtcacaatgtactctcacgacgaacaccacaccacc
accccctactcctggagtgacagagagagtcgtgaaaactccttcagccgctcacgtagc
tccagtgtctccagcatcgatcgagacaccaaagaggcaatcaccacactgcagtttggg
gagtcttttggacgaaagagcgacactttgcccacaccgtgtctgtgggttggtaccagc
cttggtatgatcttgctcattcccatgtccatccccactgaccaagaggagaggatggag
gaacaagttaccattggtccctgtggtgcagttctgatgctaaagggctctgtgttgcgc
tttggcttcttggactgcatgggtgcactcatccaaagcccctacgaggtttggcgtgat
gtcaacgccccagaagaccccgaccgaccacgaaagcgcaagctggtgcatttctcgccc
tcctcctcccaggatacctgcggagaaggacatctggctatcgtatgctccgagaggcaa
gccaaagtgttcttgatgccctcacagtcttgcctcttcgtccacaacatcacagagtcg
tcgttcgtcctacgggctgacgtggtgtcagtgtgtaatagtgtgtgcctcgcctgcttc
tgcgccaacggacacgtcatgaccctcagtttgcccagtctaagaccgctgatggatgtt
aattacctgcctctgacagacatgcgcattgcgagaaccttttgcttcaccaacggggga
caggcactttatctcagttccccgacagagatccagagaattacatacagccaggagatg
tatgacaatctgcaggaaatgctgggagagctgtttacgccaacagaaacaccagaggcc
cagaatagaggcttcctaaagggcttcttcggagggaatgctcacacatttgaccgagag
gagctctttggtgaggcagcagcaggtaaggcttctcggagtttggcccagcacatccct
ggtcagggaggggtggagggaatgaaggtggcagctagtggggcagttggtgagctggcc
agggcccgcatcgcgctggatgaaagaggccagaggctcggcgagctggaagaaagaact
gcgctcatgatgaccagtgcagaatgtttctccaagcatgctcatgagctcatgttaaag
tgcaaggacaagaagtggtaccagttgtaa
DBGET
integrated database retrieval system
