Syngnathus scovelli (Gulf pipefish): 125973539
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Entry
125973539 CDS
T08785
Symbol
abcb11a
Name
(RefSeq) bile salt export pump isoform X1
KO
K05664
ATP-binding cassette, subfamily B (MDR/TAP), member 11
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125973539 (abcb11a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sscv02000
]
125973539 (abcb11a)
04147 Exosome [BR:
sscv04147
]
125973539 (abcb11a)
Transporters [BR:
sscv02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB11 subgroup
125973539 (abcb11a)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125973539 (abcb11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_15
AAA_29
AAA_30
ABC_ATPase
Rad17
Zeta_toxin
AAA_21
DUF6356
Motif
Other DBs
NCBI-GeneID:
125973539
NCBI-ProteinID:
XP_049583780
LinkDB
All DBs
Position
8:complement(8550056..8560279)
Genome browser
AA seq
1343 aa
AA seq
DB search
MRSDNMKKTMKFTLPTDIANQKNGDEKKQKKEQNTLSVGYFQLFRFATWKEIAMMVVGSV
CALIHGAAPPLMLLVYGMMTNTFVLYELEVQELKDPNKTCQDDIIHWINGSVYEPDENVT
VACGVDIEAQMTLFAYYYIGIGVGVLFLSYFQIGLWVSAAARQTLRIRKIYFRKVMQMEI
GWFDCISVGELNTRLSDDINKLNNAIADQASFFIERVSTFVFGFMVGFIGGWKLTLVVIA
VSPLIGVAAGLMAMAVASLTGRELKAYAKAGAVADEVLSSIRTVAAFGGEDKETNRYDQN
LVEAQNWGIKKGTIIGIFQGYLWCIIFLTFALAFWYGSQLVIDTKELSPGTLIQVFFGVL
IAAINLGQASPCLEAFASGRAAAKTIFETIDRESEINCMSDEGHKLDRVKGDIEFHNVTF
HYPSRPEVMILNKLSVQVKADETTAFVGPSGSGKSTAVQLIQRFYDPKEGTVTLDGHDIR
SLNIKWLRSLIGIVEQEPVLFATTIADNIRFGKPGVPMEEVIRAAKEANAYNFIMDLPQK
FDTLVGEGGGQMSGGQKQRIAIARALIRNPKILLLDMATSALDNESEAVVQKALDKVRVG
RTTISIAHRLSTIRKADVIVGFERGRAVEKGTHGELLKKEGVYFTLVTLQNHGVSDATNV
AAGKVAAEEILETKTRTFSRGSCRMSKRSSLRLRSHSNLSSDFGPDTVSTSLRILSSQTI
TPDLPEYEDEEDEHLEPAPISRILKYNQSEWPYMLLGSLGAAINGSVNPIYALLFSEILG
TFALADVNEQKRQINGICILFCIVAVTSIFSQYLQGYAFAKSGELLTRRLRKLGFQAMLR
QDIGWYDDFRNSPGALTTRLATDASMVQGATGSQIGMIVNALTNIGASFIIAFYFSWKLA
LVILCFLPFIGLSGLFQAKMLTGFANEDKKAMEEAGQVSGEALANIRTIAGLAKESSFVE
SYDEKLECPYKSAKKRANIYGLFFGLSQSVIFMAYAASFRYGGYLVNAEGLQYVIVFRVI
STVVISGTALGKASSFTPDYAKAKTAAAHLFKLLDQRPKISTSSTDGDKWVWRLNERNVV
EMFAKSCLALLHQENFKGEIEFVNCEFTYPSRPDVRVLKGLTVSVKPGQTLAFVGSSGCG
KSTSVQLLERFYDPDQGKVLIDNRPSQSVNVPFLRSRIGIVSQEPVLFDCSIAENIQYGD
NTRSVSMEEIVAAAKQAYLHDFVMTLPDKYKTQVGAQGSQLSRGQKQRIAIARAIVRNPQ
ILLLDEATSALDTESEKIVQSALDNARKGRTSIVIAHRLSTIQNADIIAVMSNGVVIEQG
THDELMAKTGAYHKLVTTGAPIS
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcagacaacatgaagaaaactatgaaatttacactaccgacagacatagcgaat
caaaagaatggggatgagaagaaacagaagaaagaacagaatacgctcagtgttggatac
tttcaactgttccgatttgccacttggaaggagattgccatgatggtggtggggagcgtg
tgcgcgctcatccacggcgctgccccgcctctcatgcttttggtgtacggtatgatgacc
aacacgtttgtgctctatgagttagaggtgcaagaactgaaagacccaaataaaacctgc
caggatgacatcattcactggataaacggctccgtttacgagccggatgaaaacgttact
gttgcctgtggggttgatatcgaagcccagatgactctgtttgcgtactactatattgga
atcggagttggagttctctttcttagttactttcaaattggtctctgggtgtcggccgcc
gccagacaaactctgagaatccgaaagatttatttccggaaagtcatgcaaatggagatt
ggatggtttgactgcatctccgtcggtgaactcaacacaagattatccgatgatatcaac
aagctcaataacgccatcgccgaccaggcgtctttctttatcgagagggtctccaccttc
gtgtttggcttcatggtgggcttcatcggcggctggaagttaacgttggtggtcatcgct
gtgagccctctgattggtgttgctgccggactcatggcaatggctgtggctagtctaacg
ggacgagagctaaaggcatacgcaaaagcgggagctgtggctgatgaggtcctgtcgtct
attcgaacggtggcggcgtttggtggtgaagacaaagaaactaatagatatgaccaaaac
cttgtggaagcccaaaactggggcatcaaaaagggcacgattatcggaatcttccaagga
tatctatggtgcatcattttcctgactttcgctttggccttttggtatggatcccagctg
gtcatcgacacaaaggagctctctcccgggactcttattcaggtgtttttcggagtcttg
atcgcagcaataaatttgggtcaggcctcgccttgtctggaggcttttgcttcaggtcgg
gcagctgcaaagaccatctttgaaactatcgacagggaatcggaaatcaattgcatgtcc
gacgagggtcataaattagaccgagtgaaaggcgacattgagttccataacgtgaccttc
cactacccatccagacctgaagtcatgattttaaacaaactcagcgtgcaagtgaaagcg
gacgaaaccaccgctttcgttggacccagcggctcgggaaaaagcacggccgttcagctc
atccaaaggttttatgacccaaaggaaggcacggtgactttggacggtcacgacatccga
agtttaaacatcaagtggctccgctcgcttatcggcattgtggagcaggagccggtgctg
tttgccacaaccatcgcggacaacattcgctttgggaaaccgggagtccctatggaggaa
gtcatccgagcggcaaaagaggccaatgcttataatttcatcatggatcttccacagaaa
ttcgatactttggtgggtgagggtggaggtcagatgagcggagggcagaagcagaggatc
gccatcgctcgagctctgattcggaatcccaagatcctgctcttggatatggccacgtca
gctctggacaacgagagcgaagctgttgtccagaaggctttggacaaggtgcgggtgggc
aggaccacgatttctatcgcccaccgtctttccacgatcaggaaagcggacgtcatcgtc
ggatttgaacgtgggcgggctgtggaaaaaggaacccacggtgagctcctgaaaaaggaa
ggcgtctacttcactttggtcaccctgcagaaccacggcgtatcagacgcaaccaatgtc
gctgccggcaaagttgctgctgaggaaatccttgaaacaaaaacaaggacttttagccga
ggcagctgcaggatgagtaaaaggagctcgcttcgactgcgatctcacagcaacttgtcc
agcgattttgggcccgacaccgtctcaaccagcctgaggatcctttcgagccagaccatc
acgccagatcttccggagtacgaggatgaggaagacgaacatctcgaaccggcccccatt
tcccgcatcttgaagtacaaccaatcagagtggccctacatgctgctgggctcgcttggg
gctgccatcaacggctcggtcaacccaatctatgctttgctcttcagcgaaattctgggg
acgtttgctttagcggacgtcaatgagcagaagcggcagatcaatggtatctgcattctc
ttttgcattgtggccgtgaccagcatcttctcgcaatatttacagggttatgcctttgcc
aagtctggtgagctactaacacgtcgtctaaggaaattaggcttccaggccatgctgaga
caagacatcggctggtacgatgatttccgaaacagccccggagcgctgaccaccagactg
gccaccgatgcctctatggttcagggtgctacaggatcccaaatcggcatgatcgtcaat
gccctgaccaacatcggagcctctttcatcatcgccttctacttcagttggaagttagcc
ttggtcatcttgtgcttcttgccgttcatcgggctctctgggctctttcaagccaaaatg
ttgaccggttttgcaaatgaagataagaaagcaatggaggaggctggccaggtttccggt
gaagctcttgccaacatccgaacgatcgcaggcttggccaaagagagctcatttgtggaa
tcctatgatgaaaaactcgagtgtccatataaatctgccaagaagcgcgccaacatctac
gggctctttttcggcttgtcccagtccgtcatcttcatggcttacgccgcctcctttcga
tatggaggctaccttgtcaacgctgaggggctgcaatacgttatcgttttccgggtgata
tcgacagtcgtcatcagcgggaccgcactgggcaaagcttcgtctttcactccagattac
gccaaagccaagacggccgccgctcatctcttcaaacttttggatcaaaggcctaaaatc
agcacaagcagcacagatggagacaaatgggtttggagattaaacgaaagaaatgtggtg
gaaatgtttgccaaatcctgtcttgctcttctccaccaggaaaacttcaagggcgaaata
gagtttgtgaattgcgaattcacctatccgtcccgtccggatgttcgcgtgttgaaaggc
ttgacggtatcggtgaagccaggtcagacgttggcattcgtgggcagcagcggctgtggc
aaaagcaccagtgttcaactgttggaaaggttctacgacccggaccaaggcaaagtgctg
atcgacaaccgcccgtctcagtcagtgaacgtgcctttcctgagatctcggatcggcatc
gtgtcccaggagcccgttttgtttgactgcagcatagccgagaatattcagtatggggac
aacacgcggagcgtcagcatggaggaaattgtggcggcggccaaacaagcctatcttcat
gactttgtgatgacgctaccagataaatacaaaacccaggttggcgcgcaaggctcccag
ctatcaagagggcagaaacaacgtattgccattgcccgggccatcgtcaggaacccccaa
atcctgcttctagatgaggccacctctgctctggacaccgagagcgagaagattgtccag
tcagctctggataacgcgaggaaaggtcgaaccagcatcgtcattgctcaccggctctcc
accattcagaatgctgacatcatcgcagtgatgtcaaatggcgtcgtcatcgaacaaggc
actcatgatgaactcatggccaagactggcgcttatcacaaattggtcacaactggagct
cccatcagctag
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