Syngnathus scovelli (Gulf pipefish): 125973542
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Entry
125973542 CDS
T08785
Symbol
col28a2a
Name
(RefSeq) collagen, type XXVIII, alpha 2a
KO
K23619
collagen type XXVIII alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125973542 (col28a2a)
Peptidases and inhibitors [BR:
sscv01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
125973542 (col28a2a)
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GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
Motif
Other DBs
NCBI-GeneID:
125973542
NCBI-ProteinID:
XP_049583787
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Position
8:8604797..8614649
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AA seq
1215 aa
AA seq
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MLLSWESMLLTTALTCVWAQDLHDNRRAKSRTKTLDANIYDGQAILDEDCSLELSFLLDS
SESAKDNHNQEKQFAMNLVDRLQGLKLQTGRSLSLRVALLQYSSTVITEQRFSDWRGTEN
FKNRIAPIVYIGHGTYTTYAITNMTKLYREESSLGSIKVAVLLTDGSSHPRNPDIFSAVA
EAKNQGVKFFTLGITRTANEPSNVAQLRLLASSPASHFLHNLQDRDVVDKVATNITDLAD
EGCPLAPKCACEKGERGPSGPAGKKGRPGEEGAPGLKGQKGEAGTSGAPGRDGTEGKSGD
KGEQGERGECGTPGIKGDRGPEGPVGARGPRGLEGQPGPHGDIGPEGPQGKQGERGPPGP
PGIQGETGIGIPGPKGDMGFQGRPGPPGPTGVGAHGSPGPQGPQGVQGEKGPTGEGLPGP
KGDRGLPGPRGSRGQQGVGMKGERGELGPAGPPGLTGLTGVGIQGEKGVEGPRGPPGVRG
LPGEGLPGPKGDQGLPGEQGSPGERGIGESGAKGEPGSAGLGGLPGLPGEDGAPGQKGEP
GLPGSRGSDGPPGIGTPGEKGDQGLRGIRGLHGPPGISGPSGPKGERGLPGHQGVPGPPG
RSITGPKGDLGPTGPPGPIGETGIGLPGPKGDRGNTGPHGPHGPKGEGSPGPLGPPGLPG
LPGEPGPEGIGIPGPKGDIGFRGLPGLPGPPGEGIQGPPGNVGRAGPPGPNGPPGEGIQG
PKGDPGSQGLTGPRGPRGDGFPGAKGDRGSQGERGMKGAKGGLGDPGLPGEAGKPGTKGD
AGLTREDIIKLIKEICGCGVKCKERPMELVFVIDSSESVGPDNFEIIKDFVTRLVDRTTV
GRNATRIGIVLYSLDVHLEFNLVRYTNKQDVKQAIRRMPYMGEGTYTGTAIRKATQEAFY
SARPGVRKVAIVITDGQTDKREPVKLDIAVREAHAANIEMYALGIVNSSDPTQTEFLREL
NLIASDPDSEHMYLIDDFNTLPALESKVISQFCEDENGALIYNRIANGHWNGNNGVGING
NNGYGQLTDGLNNDYRKTENKVIGNGHQEEITNVRRANNRGRGDTFTLPISSDPLPIQVE
EDEDGEDLDLRAHVRASSSVVVVNKTGSLSHVKESTVSNEASSSSSSTAGSVSTNSNQLQ
RVVSPVLPEEVALRDPRCSLNLDQGTCRAYKIRWYYDKQANSCAQFWYGGCAGNDNRFDT
KEECRKTCVILKTAI
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgctcctctcgtgggaatcaatgctgttgaccacggcactgacttgtgtctgggctcaa
gatctacatgataacagaagagccaaatcgcgcacaaaaacactggatgcaaatatttat
gatgggcaagctatcctagatgaggactgtagcttggagctcagttttttgttggacagc
tccgagagcgccaaagacaaccacaatcaggagaagcagtttgcgatgaatttggtggat
cgactccaaggcctgaaactgcagacgggccgaagcttgagtctgagagtggccctgctc
cagtacagtagtacagtcatcacagagcagcgatttagcgactggaggggcacggagaac
ttcaagaaccgcatcgctcccatcgtttacatcggccacggcacctacaccacgtacgcc
atcaccaacatgaccaagctctaccgtgaggagtccagcctgggcagcattaaagtcgcc
gtgctcctcactgatgggtcctcccacccgaggaacccggatattttctctgctgtcgcc
gaggccaagaaccagggggtcaagttcttcactctgggcattaccagaaccgccaacgag
ccgtccaatgtggctcagctccgcctcctcgccagttctcccgcatcccacttcctccac
aatttgcaggacagagacgtagttgataaagtggcgacaaacattactgaccttgctgat
gaaggatgcccactggctccaaaatgtgcctgtgaaaaaggcgagagaggccccagcggg
cctgcgggcaagaaaggtcgtccaggagaagagggagccccggggctgaaaggccaaaag
ggtgaagcaggaacaagtggcgcaccgggccgggatggtaccgaggggaaatcaggagac
aaaggagagcagggtgaacggggagagtgcggcactccaggaatcaaaggagacaggggt
ccagagggaccggttggtgcaagaggacctagaggactggaggggcaaccaggaccacat
ggagacattggaccagagggcccacagggaaagcagggggaacgtggaccacccggccct
ccgggtattcagggagaaactggcattgggatacctggaccaaaaggtgacatgggattc
caggggcgcccaggtcctcctggtcctacaggtgttggtgcacatggttcaccaggacct
caagggcctcaaggtgttcaaggggaaaaaggacccacgggtgagggccttcctggaccc
aagggggatcgagggcttccgggaccgaggggatcgagaggacaacagggcgtggggatg
aaaggagaacggggtgaactggggcctgcaggtcctccagggctcactgggctgacagga
gttggcatacagggagaaaagggagttgagggtccaagaggtccaccaggagttagagga
cttccaggagaaggtttgcctggacctaagggggatcaaggtttacctggagagcaggga
tcacctggagagagaggtatcggtgaatctggtgcaaagggagaacctggatctgctggt
ttaggtggcttaccgggtcttccaggagaggatggggctccaggacagaagggggaacct
gggttaccaggttcaagaggctctgacggacctccaggaattggcactccaggagagaag
ggggaccagggtcttaggggcattcgagggttacatggacctccaggaatctcaggaccc
tccggtccaaagggtgaacgcgggttaccgggacaccagggcgttccagggccgccagga
cgatccataacaggtccaaagggagatttaggtcccactggtccgcctggaccgattggg
gaaacaggcattggacttccaggtccaaagggtgaccgagggaataccggtccacacggt
ccacatggtccaaaaggcgaaggcagcccaggaccgctggggccaccaggacttccaggt
ttaccaggggaaccgggaccagaaggaataggcattcctggacctaagggagacattggc
tttagaggactaccaggcttgcccggccctcccggagaaggaatacaaggacctccaggt
aatgttggaagagcgggacctcctggcccaaatggaccaccgggagagggtattcaagga
ccaaagggggatcctggatcccaaggtttaactggaccaagagggcccagaggtgatggt
tttcctggagccaaaggtgaccgcgggtctcagggtgagagaggaatgaaaggtgcaaag
ggaggtttgggagatccaggactgcccggtgaagcaggaaaaccaggaacaaaaggagac
gcaggactgacaagagaggacattattaagctcattaaagaaatatgtggatgcggcgtc
aagtgcaaagaaaggccgatggaactcgtctttgtgatcgacagctccgagagcgttggc
cctgacaactttgaaatcatcaaagatttcgtcaccaggctggtggaccgaactacagtg
ggacgcaacgccacgagaatcggcattgtcctctacagcctggacgtccatttggagttc
aacttggtccgctacacgaacaaacaggatgtgaagcaggcaatccgaaggatgccttac
atgggcgagggcacctacaccggcaccgccatccgaaaggccactcaggaggctttctac
agcgccaggcccggcgtcaggaaggttgccatcgtcatcaccgacggtcagacagacaag
cgagagcccgttaaactcgatatcgccgtgcgagaggcccatgccgcaaatatcgaaatg
tacgctctgggtatcgtcaattcttcggatccgacgcagacggagtttctgagagaactc
aacctcattgcctccgatcctgatagtgaacacatgtaccttattgatgacttcaacact
ctgccagcgcttgagtccaaagtcatcagccagttctgtgaagatgaaaacggtgccctc
atctacaatcgcatcgcaaacgggcactggaacggcaacaacggagtcggtatcaatgga
aataacggctacggacagcttactgatggactcaacaatgactataggaaaactgagaat
aaagtgattgggaatggtcaccaggaggagatcacaaatgtgaggcgtgccaacaaccgt
ggccgtggagatactttcacactacccatcagttctgacccacttcctattcaggtggag
gaagacgaagatggtgaagatttagacttgagggctcatgtgagagccagcagcagcgtt
gttgtcgtgaacaaaactggatctttatcacatgtgaaggaaagcacggtctccaatgaa
gcatcatcttcatcatcctccactgcaggatctgtatccacaaactctaatcagctgcag
cgtgtggtgagtccagtcctgcctgaagaggttgcgcttcgcgatccccgctgtagcctc
aacttggaccaaggcacctgcagagcgtacaagatccgctggtattatgacaaacaggcc
aattcgtgcgcacagttctggtacggaggctgtgctggaaatgacaatcgatttgatacc
aaagaggaatgcaggaagacttgtgttatattgaagacagctatttaa
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