KEGG   Syngnathus scovelli (Gulf pipefish): 125973600
Entry
125973600         CDS       T08785                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03410  Base excision repair
sscv04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    125973600 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    125973600 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sscv03400]
    125973600 (parp4)
DNA repair and recombination proteins [BR:sscv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     125973600 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 VIT_2 VWA WGR-like_PARP4 VWA_2 BRCT_2 BRCT
Other DBs
NCBI-GeneID: 125973600
NCBI-ProteinID: XP_049583915
LinkDB
Position
8:complement(13324824..13344052)
AA seq 1841 aa
MAVFAKCSVLMDLKDLPFKKRRSLKLSVTENGGSLCFVVTKQCSFVVVGNVSHLSSSRLR
SICRFQTPVVGLDYVHSCLQSGILLPFEDFKIDISSHDASSQTPPLYSAKQSPFHDEVSR
AVVEPTKQEATPPDKSGSVQGKFRIYTERDEDLPAYPDDFNVAKYSIFHKDDSRTWCVLE
LQSAKGKKRQQYRVIRYWKDQTLPNDMVAFPSTSEEAVEVYQILTETLLASGLRLWAGIP
PQDQNLGSDPLQQLLLEEKLNSGVLSQDVGVFVELLWTEALGHLDNILRVPVNQLSLNDV
SRAEGLLIQVQRNLKEPKDGTAHSLLLQAYELLQLKYKNLACNFKVISEKLDLCQLIRDM
LNVSEMTLRSPAPSCVGKFRALRCSIETVEPGCREYLNVSSLLDDGAVQIHQVLRVSRAV
ELQTFHGKLGNVKSLLHSSGVSNFVGILSRGLLLPCVGVEDYGIKRTDAGNLGNGIYFSD
SMSTCLKYSVPSVTDGSRLLLVCDVALGRCLELHQRHPTLTQAPEGHNSVHGMRRTATTH
SEFEGDEYVVYSPEQVKLKYVIRFSIDGDQLKSFSPAVDVSAESCLPPADLAVLPDDDGG
VGNVKNPLDDVTPGLLDSSGQQLPLLAVHVKCKLMDLLSHVIIFQRYTNQSNVPIEAKYV
FPLDEYAAVCGFEAFINGKHVVGQVKEKEQARKQYKQAIEKGHGAYLMDQDAPDVFTISV
GNLPAGASVLIKVTFVSELIMKDGSVFFSLPGSVAPWQESAALNQTTQVTVDKVCVTDDT
ASTREFSLDMSIEMPYEISSLQCITHKVKIKRTDCKAVVSLLPGQVMAPEGFQLSVTLSE
VHLPRMWVEEHPDKDSQACMLVFYPNFDIKPTSGSDEVVILLDTSESMRGEPLLWAQRIA
RHVIKTLNGDVKINIVLFGTDHTQAFLTPQPLDKARQAAENFIQQSFSPVGGSTELWRPL
QALALLPPSQGTRNLFLLSDGHLQNSDVTLQLIRDNVEHSRLFTCGISSTANRHMLRTLA
QAGCGAYEFFDAKTKHKWAEKVECQVKRMASPGCSSVSVKWQQFNPPACPPAQAPKQLHA
LFNNCHTLVYGFVPNCTQASLFGNLSGQELRTMVSTSELQKTRGTFLHKLTARALIRDYE
DGSLDSNQAEHEGKKSQLKSFIIDLSKEFSILSQFTSFVAIEEREPVEAEEGFTDIPKLL
AEEDVDILPYINWISPPQTCREEEDEDEDNSGYILLCEEWLDFQDMGPSDGSDSSETSDS
LPMVCGSLPQSPGSGSPPTFQRQYKQAMAIQPRLEMASFEMDTRCFQRSSYTRSALSDSL
SITLDATPPPPLGSPSVVPPPPRQSLALPPPSAPGRWAFSAPPPPPGRSPDENYIQNLGS
AVPPPPPPVGYSLFSAQPLLYSECLSGPSFVPRPPEPVDQPSFLASPSAFVIASPLPQPP
GGVSFDSPPPLPLHSSDVSRMRTSLLSVCPPSAGLKLMNREVSHLSPPAALTSNRYRKPR
RSFECEPGRAGRARAQLSLPAKQFSMETEEADELETDGIELMEPEMEDYISVDFSRAASA
DDTYGGQQQVISQQLKEVICRAVPKMKIPEQKWRASKKKAFIFQEETSTQSAEKNLSAVG
FSFGGRAASKAVLNKVQQEASSKDRTLVGSTMPGLQLAHQTGWTMFGGGGFCGTAPIRIL
KWPEIFQMQTSDGYWELSTELGECINIDLDDFANVFLESKGIRSLGVKARADILRLLATL
LVLQLMRLEKLPEGILLRTLFCLKDTPVSRPARWREVKKAVDWASWADRQYPCICSRLEF
GFTWESATRQLLGYDNFTFFTPLGGLALRSMSNAPAALVVH
NT seq 5526 nt   +upstreamnt  +downstreamnt
atggctgtgtttgccaagtgctctgtacttatggacttgaaagatttgccatttaagaag
aggcggagcttgaagttgtccgtgacagaaaatggaggaagtctttgttttgtggtcacc
aaacaatgctcctttgtcgtggttggcaatgtgtcacacctaagctccagcaggctgcgc
agcatctgcaggttccaaacgccggtggtggggctggattatgtgcacagttgtctgcag
agtggcatcctcctgccttttgaggacttcaagatagacatatcctcccatgatgcctcc
tctcaaactcctcctctctactcagctaaacaaagtccattccatgatgaagtgagcaga
gccgttgtggagccaaccaagcaggaagccacacctccagataagagtggaagcgtccag
ggcaagttcaggatttatacagaacgggatgaggatcttccagcatatccggatgacttc
aatgtggccaagtattccatctttcataaggatgacagcagaacttggtgtgtgttggaa
ctgcagagtgccaaaggaaagaagaggcagcagtaccgcgtgattcgctattggaaggat
cagacgttaccaaatgacatggtggcgttcccgtcgacctcagaagaggctgtggaggtc
taccagattctgaccgaaaccctgctggcttcgggtctgcgcctatgggccggaattccc
ccgcaggatcagaaccttggctcggaccccctgcagcagctgctgctggaggagaagctc
aactccggagtcttgtcacaagacgtgggtgtctttgtggagcttctgtggaccgaggcc
ctgggtcaccttgacaacattctccgagtgcctgtcaaccaactcagccttaatgacgtg
agcagagctgagggattgttgattcaagtgcagagaaatctgaaggaacccaaggatggc
acagcgcactctcttctgcttcaagcttacgaactgctgcagctaaaatataaaaaccta
gcttgcaatttcaaggttatctccgaaaaactggacctctgtcagcttattcgagacatg
ctgaacgtgagtgagatgactctgagaagccccgccccttcctgcgtcggcaagtttcgc
gccctgaggtgcagtattgaaacggtggagcctggctgccgcgaatatctcaacgtgtca
tcgctgctcgatgacggtgctgtgcagatccatcaggtgttacgtgtcagcagagccgtg
gagctccagacctttcacggcaaacttggcaacgtcaagtccctccttcactcatccggc
gtcagcaactttgttggaattctgtcacgtggtttgctgctgccctgtgttggagtggaa
gattatgggattaaacgaacagatgctggcaatcttggaaatggtatatacttcagcgat
agcatgagcacctgcctaaagtactcagtacccagtgtcacggacggctctcggctgctg
ctggtgtgtgacgtagccctggggcgctgcctggagcttcaccagagacaccctactctg
actcaggcccctgagggacacaacagcgtgcacggcatgcgccgcacagccaccactcac
tcggagtttgagggtgatgagtacgtggtgtacagtccagagcaggtcaagctgaaatat
gttatccggttcagcatagatggagaccaactcaagtcgttcagcccagctgtagacgtc
tcggctgagtcttgtctaccccctgctgacttagcggtccttcctgatgatgatggcggt
gttggaaacgtaaagaatccattggatgatgtgactccaggattacttgacagttcaggg
cagcagctccctctgctggctgtacatgtgaagtgcaagttgatggatttgctctctcat
gtcatcatctttcaaaggtacactaatcagagcaacgtgcccattgaagccaagtacgtc
ttccctttggacgaatacgcagccgtgtgtggttttgaagccttcattaatggcaaacat
gtggtgggacaggtgaaggagaaagagcaagctcgtaagcagtacaagcaggctatagag
aagggccacggagcctacctcatggaccaggacgccccagacgttttcaccatcagcgtg
ggcaacctgccagcaggcgccagcgtgctcattaaagtgaccttcgtgtccgagctcatc
atgaaggacgggagtgttttcttctccctgcccggtagtgtcgcaccttggcaggaaagt
gctgcgctcaaccagactacgcaggtgacagtggacaaagtttgtgtaacggatgacaca
gcaagtacaagagagttcagcctggacatgtccattgagatgccgtatgagatcagcagc
ctgcaatgcattacgcacaaagtcaagatcaagaggaccgactgcaaggcggttgtgagt
ttgctaccagggcaggtcatggctccagaaggattccagctgtcagtcactctgtcggag
gtacatctgcccaggatgtgggtagaagaacaccctgacaaggacagccaggcctgcatg
ttagttttctaccctaactttgacatcaaacccacttctggatcagatgaagttgtcatt
ttgctggacacgtctgagtccatgaggggagagcctttactctgggcgcagaggattgcc
cggcacgtcatcaaaacccttaacggtgatgttaaaatcaacatcgttctttttggcaca
gatcacactcaagctttcctgacaccccagccacttgataaagctcgacaagcagctgag
aacttcatacagcagtctttctcacccgtgggtggcagcactgagctttggaggcccctc
caagctctcgcactgctgcctccatcccaaggcacccgcaatcttttcctgctgtccgac
ggccacctccagaactccgatgtcactttgcagctgatcagggacaatgttgaacatagc
cgactcttcacctgtggcatcagctctacagccaatcggcacatgctgagaacccttgcc
caggcaggatgtggagcctatgaattttttgatgccaaaaccaagcacaagtgggcagag
aaggtggagtgtcaggtgaagcgcatggcatctcccggctgcagttctgtgtcagtcaag
tggcaacagttcaacccgccggcatgccctcctgcgcaggcccccaagcagctccatgcg
ctcttcaacaactgccacacgctggtctatggctttgtgccaaactgcacacaggccagc
ctgttcggaaacctgagcggccaggagctaagaaccatggtgtccaccagtgaactgcag
aagacgaggggcacgtttcttcacaagttgacagcgagagctctcatcagagattacgaa
gacggaagcttggattccaaccaagctgaacacgaggggaagaaaagccagttaaagtcc
ttcatcattgacttaagcaaagagttctccatcctgtctcagttcaccagctttgtggcc
attgaagaaagggagccagttgaagcagaggagggcttcacagacatccccaagttgttg
gctgaagaagatgtggacattcttccctacatcaactggatatctcctcctcagacgtgt
agagaagaagaagacgaagatgaggacaattcaggctacatcctcctctgcgaagaatgg
ttagacttccaagacatgggtccaagtgatggatcagactcaagtgagacgtccgactct
ttgcccatggtgtgtggttccctcccccagagtcccggttcaggttctccccctacattt
caaaggcaatacaagcaagctatggcaatacagcctagattggaaatggcgtcatttgaa
atggacactagatgtttccaacgttctagttatactaggtctgcgttgtcagactcactt
tctataactcttgatgctactccacctcctccattaggcagcccatcagttgttccacca
ccaccacgacaatctcttgctctgcccccaccatctgcacctggtcgctgggcattctct
gctcctccacctccacctggccgttctccagatgaaaactacattcagaatttaggctca
gcagttcctccacctccaccacctgttggttattctttatttagtgctcaaccacttctc
tatagtgaatgtctatcaggcccatcttttgttcctcgtccaccagaacctgttgaccag
ccttcatttcttgcttctccatctgcatttgttattgcatctccattgccacaaccacct
ggtggcgtatcatttgatagtcctccacctctaccgctccattcatcagatgtaagccgc
atgcggacttcactcctgtcagtctgtccaccttcagctggacttaaactgatgaacagg
gaagtttcccatttgtctccacccgcagctctaacctcaaatcgctatcgaaaaccgagg
cgttcttttgaatgtgaacccggccgcgctggcagggccagggcacagctcagtctacct
gccaagcaattctccatggaaaccgaagaggcagatgaattggaaactgatggaatagag
ttaatggaaccagagatggaggactacatttctgtcgatttcagtcgagctgcatccgca
gatgacacttatggtggccaacaacaagttatttcacagcagcttaaggaagttatttgt
cgtgcagtgcccaaaatgaaaattccagagcaaaaatggagagcatcaaagaagaaagca
ttcatattccaagaggaaacttcaacccagtctgctgaaaagaacttgtctgcggtgggt
ttttcatttgggggccgagctgcaagcaaggctgtactgaacaaggtccaacaggaagcc
agttctaaagacagaactttggttggttcaactatgccaggactccaactagctcatcag
accggctggaccatgtttgggggcggagggttttgtgggaccgccccaattcgtattttg
aaatggcccgaaatcttccagatgcagacttctgatggctactgggagttgagcactgaa
ttgggcgagtgcatcaatattgatctcgacgactttgccaacgtgttccttgaaagtaaa
ggcatccgctcactcggcgtaaaggcccgtgcggacattctgaggctcctggcgactctt
ctggtcctgcagctgatgcgattggagaagcttccagaaggcattttgctgcgcaccctc
ttctgtctgaaggatactcccgtcagcagaccggcccgctggcgtgaggtgaagaaggcg
gttgactgggccagctgggcagaccgccagtacccgtgcatctgcagtcgcctggagttc
ggtttcacgtgggagtcagctacccgacaactgctgggctacgacaactttaccttcttc
acgcctctcggcggcctggcgttgaggagcatgtccaacgcccctgccgctctggttgtc
cactga

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