Syngnathus scovelli (Gulf pipefish): 125973619
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Entry
125973619 CDS
T08785
Symbol
ofd1
Name
(RefSeq) centriole and centriolar satellite protein ofd1 isoform X1
KO
K16480
oral-facial-digital syndrome 1 protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sscv03036
]
125973619 (ofd1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125973619 (ofd1)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
125973619 (ofd1)
Pericentriolar materials (PCM)
Centriolar satellite
125973619 (ofd1)
Centrosome duplication proteins
Centriole replication proteins
125973619 (ofd1)
Cilium and associated proteins [BR:
sscv03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125973619 (ofd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LisH_2
FOP_dimer
LisH
Motif
Other DBs
NCBI-GeneID:
125973619
NCBI-ProteinID:
XP_049583955
LinkDB
All DBs
Position
8:12069208..12187192
Genome browser
AA seq
1019 aa
AA seq
DB search
MSAKEDALSPDELRKRLYKTLRDKGVLDTLKTQLRNQLIHELKPAPLSGAGPSLRSDSLL
VSACNNMVADYLHSSGYEYSLSVFCPESGLSKEKVLKKGDLLRHLKISPDSPLYKSLSQT
IDNTGFLINLVSHITDHQTTSLRRDADTQTTSSASYEQSLVEKMKMIDKEYENVNYSGER
WFSFQSKLASYKRELESQLQTEMTTKLQHFKEVELAKVKMEEKVQFQKEFDKLKQELERT
YEMKTKALSTREKHAIERLQKQQEIEEKDVYMQRQMVLKEIDTLRNRENELKLRMESFEE
TCQIHQDKVKAGEELLRRRELAVKTMEDMYDQKLKNELSSYKMELKEDYNKRTEQLTTSE
KRNKEESIRIEQDTAAIKAKLEEYNKACSQMKRLQGELDTAQQQTHLLRQQNELLRERLE
SMNDFPSLKEDNAHLQGQVKLLKKQLEEAQEENRHLHADLGKPSDEELALQVELCNLQSA
RKLNEEEFANQKHGLQKQLQLEVERCGQLKVQLMECEEKLRWTTAHVDDLKMQLRQTQQA
LENEVLLNPKPSLVDRSVLDKLALPDIHVDRAAPWSRAAYVGDVGQLAHADSNSDLEMLA
ECNARMRELEKEAESLEAKCRKYQQRAARSSVSRRRPSTPSSRADSPQLTQNSDLSHPYT
SHLSKSFIRPLSPKKARTPSPAAVDAGNAFPAAQHRVTFYQDQPSKSYGISSLSSAELQF
TRRDDPPKEQRSFSHVPFLTRTTLPSDAAEVASAALLQDSQDSHLPSAPQDEASSSGEFS
PELSPPRSPQLQSTVQNRHSVPNQQHVSSSSHSSPQPEMINIEDLTGISPEPGYIPELLL
DTAVPLSSSEAPGGPTVPRPQSPRDLPVAATDSPGRVESSQISTAPEIEDKEDEEQRWER
ERKERQEVRRREQEEAREREQQEVERLEKETLLQQQQQQEVVEEEKEVKGDGDKRQEAEV
PNENPLEKYMKMVLEAREKKLDKSSGDEEHVSPEVKSLSEEKDNSIAAYSHKDEDDDFW
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaaggaagacgctttatccccagacgagctgaggaagaggctttataaaacg
ctaagggataagggagtgctggatacacttaagactcagttgcgcaaccagctcatccac
gaattaaaaccagcaccgttaagtggagcaggaccatcactgcgatcagattcacttttg
gtctcagcttgcaacaacatggtggctgactatcttcacagctcaggctatgagtactca
ttatctgtattctgccctgagagtggcctgtccaaagagaaggtgctcaagaaaggagat
ctccttcggcatcttaaaatcagccctgactcaccactttacaaatccttgtctcagacc
atcgataatacaggctttttaatcaaccttgtgtctcacatcactgaccatcagactacg
agccttcgccgcgatgccgacacccagacaacaagttcagcaagttatgaacagtctctg
gttgagaagatgaaaatgatcgacaaggaatatgagaatgtgaattacagcggcgaaagg
tggttttcatttcagtctaagctggcttcctataagagagagttagaatcccagttgcag
actgaaatgacaacaaagttgcagcattttaaagaggttgaactcgccaaagtcaagatg
gaggaaaaagtgcagttccagaaagagtttgacaagctcaaacaagaactggagagaacc
tacgagatgaagacgaaagcgttgagcaccagggagaaacatgccattgagcgccttcaa
aaacaacaggagatcgaggaaaaagatgtgtacatgcagaggcaaatggtgctgaaggaa
atcgacacgctgcgtaacagagaaaatgagctgaaattgcgaatggagtctttcgaggag
acttgtcaaatacaccaagataaggttaaggccggcgaagagctgctgaggagacgagaa
ctagcagtgaagaccatggaagacatgtatgaccaaaaactgaagaatgaactttccagt
tataagatggagctaaaggaggattacaataagagaacagagcaactaacaaccagtgag
aagcgaaacaaagaggaaagcattcgcattgaacaagatacggctgcaatcaaagccaaa
ttagaggagtacaataaagcttgctcgcagatgaaacggttgcagggggagctcgacact
gcgcagcagcaaacccatctgctccgtcagcagaacgaactgctgagagaaaggctggag
agtatgaacgacttccccagtttgaaagaagacaacgcacacttgcaggggcaagtgaag
ctactgaagaaacaactggaggaagcccaggaggagaaccggcatctccacgcagatttg
ggcaagccctccgacgaggagctggccttgcaggtggagctgtgcaatctacagagcgct
cgcaaactgaatgaggaggaatttgccaaccagaagcacgggctgcagaaacagctccag
ttggaggtggagcgatgcggtcagctgaaggtgcagctgatggaatgtgaggagaagctg
cggtggacgaccgctcatgttgacgacctcaaaatgcagcttcgccaaacccaacaagct
cttgaaaatgaagtgctcctcaaccccaagccttccctggtggaccgctctgtgttggac
aagctggccctccctgacatccacgtggaccgagcggcgccgtggtcccgagcggcttac
gtcggtgacgttggccagctcgcacacgccgactccaactccgacttggagatgctggcc
gaatgcaacgctcgcatgcgagagctggagaaggaggctgaaagcttggaggcaaaatgc
cgaaagtaccagcagagggcagcgcgctccagcgtctcgcgaaggcgcccctcaacgcct
tcaagtcgggctgactcgcctcagctcacacaaaattctgacctctctcacccttacacc
tcccacctgtcaaagagcttcattcgaccactttcccccaaaaaagcacgaaccccctcc
ccagcagccgttgatgccggaaacgcctttccagctgctcaacaccgagtgaccttctat
caagaccagcctagcaagtcttacggcataagcagcctttcgtcagctgaacttcagttt
acgagacgtgatgacccccctaaggagcaacgctcattctcacatgtgcccttcctcacc
aggacgacgcttccttcagatgcagcagaagtcgcttcggcggcattgctccaggactca
caggacagccacctcccctcggccccccaagacgaggcgtccagctcaggtgaattctcc
cccgagctgagcccccctcgcagccctcagctccagagcacggtccaaaatcgtcacagt
gttccaaatcaacaacatgtctcctccagctcacattcctccccgcagcctgagatgata
aacattgaggatctcactggcatttcaccagaacccggctacattccagagcttctcttg
gacactgccgtccctctctcttcctccgaagcccctggtggccccactgtcccccgccca
cagtccccgagggacctcccggtagccgcaactgactcaccgggccgagtggaatcttcc
caaatctcaacagcccctgagattgaggataaagaggatgaggaacagcgatgggaacga
gagagaaaagaaaggcaagaagtgaggcgaagggagcaagaggaggccagagagagagaa
cagcaggaagtggaaagactagagaaagaaactctcttacaacaacaacaacaacaggag
gtggtggaggaggagaaggaagtcaagggagatggggacaagaggcaggaagcagaagtc
ccaaatgaaaaccccttggagaaatacatgaagatggttttggaagccagagaaaaaaaa
ctagacaagagctctggagatgaagaacacgtgagcccagaggtcaagagtttgtctgag
gagaaagataatagcattgcagcatactcgcacaaggatgaagatgatgatttttggtga
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