Syngnathus scovelli (Gulf pipefish): 125973623
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Entry
125973623 CDS
T08785
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125973623 (pcdh8)
Cell adhesion molecules [BR:
sscv04515
]
Cadherins
Protocadherins
125973623 (pcdh8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
125973623
NCBI-ProteinID:
XP_049583961
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All DBs
Position
8:complement(11870869..11875461)
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AA seq
961 aa
AA seq
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MARLAHCCFVLALIIYKVQCTTTRYFTYEEDAPGTEIGNLSRDLKIDPAEGHDTSFRFMQ
ENNFSVVYMREADGLLCVAELIDRELLCPRTPRCFVTFDVVALSNEKFQLIHVEIEVRDI
NDHAPAFARNESTLEILENLPLDSRFPLPIAVDPDVGENYIQSYNISPSSHFAVEAHERE
DGVKFAELVLVRELDREMEDSYLVEVTATDGGVPSRSGSTTVRIKVLDFNDNGPIFEHGS
LKVELNEDAPVGHRVVRVHAFDPDEGVNGEVMYAFDGITAEAARVFHIDPHTGDVTLRAR
VDFERRRSYELRVKASDLGAEPASSSCKVSIDVVDVNDNAPEINIKPMTASADDVAYITE
AAAAESFVALISTSDLDSGSNGYVRVSLLGHEDFTLQQAYGETFMIVTTATLDRERIPEY
NLTIVAEDLGSPPFKTVRQYTIRVTDENDNAPLFSKSAYEVSIIENNIPGSYITTVVARD
LDLGKNAKVSYKLLESDVQGGSLVSTFVSVDSQTGSLYTARSFDYESIHEVELVIQAEDK
GYPSLSSTSTIKIRVVDQNDNYPYFTFPVLFNDSADIPLPLNAPASYLALRLSAEDTDDG
VNAELSYHMLQGDRKLFSVDKDTGEITLKQWLKAQIGDILELVVVVSDRGHSPLSSSATV
RFVVTDTDPDEDRAVVVLRSSDEEGIVAGLDGSLVVIILLSGGCALLLVAIVAVVVTCKV
GRGRSGPSKREGRHNLFDSRPPPGSTNGNIYTGSRGFFLERTSSSLDDSCSYEERSNDSE
SKVFIPSKHFQPSSIWQADKYCLQVSGTTNTDQLSVKDSGKGDSDFNDSDSDVSGDAGKR
SFSTFHPRLKSSSSTANSLAGDCQGTYCAIPQQCFRNPRDLAYAVGFSPEILFNDLNGYT
HSWKESGYATNPKKPHSGGVQNYTGRTGTLPPYLSQVQNDPKLHKPNIVTVATESEVATM
F
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggcaagacttgctcactgctgcttcgtgctggctttaattatttacaaagtccagtgc
acgacaacaagatacttcacctacgaggaggacgcacctgggacagaaataggcaactta
tcccgagacttgaaaatcgaccccgccgaaggccatgacacgtcctttcgcttcatgcag
gaaaacaacttctcggtagtgtacatgcgggaggccgacgggctcttgtgcgtggctgag
ctcatcgaccgcgagctgctgtgtcctcgcaccccgcggtgctttgtcacctttgacgtg
gtggctctctccaatgaaaagtttcagctcatccacgttgagattgaagtgcgggacata
aacgaccatgcccctgcatttgcccgcaatgagagcactctggaaatcttggagaatttg
cccctggactctcgcttcccattgcctattgctgttgacccggatgtgggtgagaactac
atccagagctacaacatctcccccagcagccactttgccgtggaggcgcatgagcgggag
gatggtgtcaaatttgccgagctggttctggtgagggagctggaccgggagatggaggac
tcctacctggtggaggtaaccgcaactgacggaggcgtgcctagcagatcaggctccacg
acggttcgcatcaaggtgctagacttcaacgacaatgggcccatttttgagcatggctct
ctgaaggtggagcttaatgaggacgctccggtgggccaccgtgtggtgcgggtgcacgcc
ttcgaccctgacgagggtgtcaacggcgaggtgatgtatgcctttgacggtatcacagca
gaagccgcccgcgtcttccacatcgacccgcacactggcgatgtgacgctgagggcccgt
gtggactttgagaggcgtcgatcctacgagctgcgtgtcaaggcctccgacctgggcgcc
gagcctgcgtcctccagttgcaaggtgtcaattgacgtggtggacgtgaacgacaacgcg
cctgagatcaacatcaagcccatgaccgccagtgcagacgacgtggcgtacattacagag
gctgcagccgcagagagctttgtggccctcatcagcacctcggacctggactctggctcc
aacggctacgtgcgagtcagccttctcggccacgaagacttcaccttgcagcaagcctac
ggggagaccttcatgatagtcaccacggccactctggaccgggagaggatccctgagtat
aacctgactattgttgctgaagatttgggcagccccccttttaaaaccgtgcggcagtac
accatcagggtcaccgatgagaacgacaacgcacctctgttcagtaagtcggcgtacgaa
gtctcaattatagaaaacaacattccaggttcttacatcaccacagtagtggcccgcgat
cttgacctgggcaaaaatgcaaaagtctcctacaagcttctggagtctgacgtgcaaggc
gggtcgctggtttccaccttcgtgtctgtagattcccaaacaggctctttgtacacagcc
aggtccttcgactatgaaagcatccatgaagtcgaactggtcatccaagcggaagacaaa
gggtacccctcactttcgagcacgtcgacaattaaaatccgagtggtggaccagaatgac
aactacccgtatttcaccttccccgtgttgtttaacgactccgccgatatcccgctgccc
ttgaacgcccccgcttcctatctggctctgcgcctctctgccgaagacacagatgacggc
gtgaacgccgagctgtcctaccacatgttacaaggcgaccgcaaattattcagtgtggac
aaggacactggggagatcaccctcaaacaatggctgaaggcccaaatcggggacatcctg
gaactggtcgtggtcgtgagcgaccgcggccattcgccactctccagcagcgccacagtg
cgcttcgtggtcactgacacggatcccgacgaggaccgagccgtggtggtcttgcgttca
agcgatgaagaaggcatcgtggcgggcttggatggctcgctggtggtcatcatcttgcta
agcggcgggtgcgctctgctgctggtggccatcgtggccgtggtggtcacgtgcaaagtg
ggccgcggccgctcagggccatctaaaagggaaggccgccacaatttgtttgacagcagg
ccgccccccgggtccaccaatggtaacatatacactggctcgagaggcttcttcctggaa
aggacctcctcgagtttggatgactcctgctcgtatgaggagagaagcaacgactcagaa
tcaaaggtgttcattccctcaaagcacttccagccgtcatctatatggcaagctgacaag
tattgtttgcaagtgagtggcacgaccaacactgaccagctgagcgtgaaggacagcggc
aaaggggacagcgacttcaatgactcggactcggacgtcagcggagacgctggcaagagg
agcttcagcacctttcacccaagacttaaaagttcgtccagcaccgctaacagcttagcg
ggggattgccaaggcacctactgtgcgataccgcagcagtgcttcaggaaccccagagac
ttggcgtatgctgtcggcttctccccggaaatcctcttcaatgatctgaatggctacacc
cactcctggaaggagtccggctatgcgaccaatcccaagaaacctcatagtggcggtgtg
cagaactacacgggtagaacgggaacccttccaccttacctgtctcaggtgcagaatgac
cctaaactccacaagccaaatattgtaaccgtggcaacggagtcagaggtagcgactatg
ttttga
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