Syngnathus scovelli (Gulf pipefish): 125973624
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Entry
125973624 CDS
T08785
Symbol
slitrk5b
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125973624 (slitrk5b)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRR_LRWD1
LRRNT
Motif
Other DBs
NCBI-GeneID:
125973624
NCBI-ProteinID:
XP_049583962
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Position
8:complement(11790446..11797804)
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AA seq
865 aa
AA seq
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MYLWLACVLLSATSVCTAGMSVESTCERVCACEEREGTLTVSCENRGIGSVSEINPLNFP
QYHLLLTGNFLRKLAANDFVDYRGLTILHLGNNEISEVEAGAFNGLQGLKRLHLNNNKID
ALKEELFWGLESLEYLQLDYNYITQVAPNALGRLRHLEVLILNDNLISTLPVNIFQHVPL
THLDLRGNQLKVLPYLGLLEHMNSVVELQLEENPWNCSCDLIALKTWLESISYTALVGDV
VCEFPFRLHGRDLDEVSKQELCPRRAIAEYEMPPQPHLSTDGNYRSTPALATASLTSSGI
ARSSSRPTKGPRQSGKLKSRPTARLAVNKPQNYGQIISYQTKSPVPLDCPSACTCNLQIS
DLGLNVNCQERKIENISDLEPKPYNPKKMYLTGNYIPVVRRTDFIEATGLDLLHLGNNRI
AQIHDRAFGDLTHLRRLYLNGNLIDHLTADVFYGLESLQFLYLEYNVIKEITADTFQHVP
KLQLLFLNNNLLKTLPVGAFHGLTLARLNLRSNHLRYLPVSGVLDQLTALVQVDLYENPW
DCSCSILDLKMWVEQLSTGTVVNNVICGSPKRLAGEDMRYIKTANFCPNNSVMPASMIPP
SEESIPGSTITIETSLDSDTQYSAIPLSVMILALLLMFIMSVFVAAGLFVTVRKRHLKNQ
NEQNNSMNACISSLNMEYGLYKKGSVPKVRTSAGHVYEYIPPPSEQTSRTPGHASADSKS
AEGFPDFDQLSGAFLGNSDEDAASNVIGSEYSTAASEPLNKPFGMKQDDPSCYREVLNPE
QKPHYSHTLPCRHAARQAGQHTSDFDVRPQYVHPDRVQQTILYCTTPSTVYVEPNRSEYW
ELKAKLHIDPDYLEVLEKRTTFTQF
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttggctcgcttgtgttttgctgagcgccacctctgtatgtacagccggaatg
tctgttgaaagcacatgcgagcgagtgtgcgcgtgcgaggaaagagaggggacactcacg
gtgagctgcgaaaacaggggcattggaagcgtctctgaaataaacccgctaaacttcccc
cagtatcatctcctgctcaccggtaattttttaagaaagctcgccgccaacgactttgtc
gactatcgaggactcaccatattacacctgggaaataatgagatatccgaggtggaagct
ggagcctttaatggacttcaaggattaaaacgattacatcttaacaataacaaaattgat
gccttgaaggaggagcttttctggggcttggaaagtctggagtatctgcagctagattat
aattacatcactcaagtggcccccaacgctctcggcagacttcggcacctggaagtgttg
attctgaatgacaacttgatatcgactctacctgtgaacatcttccagcatgttccattg
actcatcttgacttgaggggaaatcagctcaaagtccttccctacttaggtctgctggag
cacatgaacagcgtggtggagctgcagctggaggaaaacccgtggaactgctcttgtgac
ctgattgccctcaaaacgtggctggagagcatttcctacacggcgttggtgggcgacgtc
gtttgcgagttccccttccgcctccacgggagggatctagatgaggtctccaagcaagag
ttgtgtcccagaagagccatcgctgaatacgagatgccgcctcagccgcatttgagcacg
gatggcaactacaggagcacgccggcactcgctacggcttccttaacctcatctggcatc
gcgagatcctcgtcgaggcccaccaagggacctcggcagtcgggtaaattgaaatcaaga
ccgactgctcgactggcggtgaacaaacctcagaactacggccaaattatttcctaccaa
accaaatctcccgtgcctttggactgcccgtcagcctgcacctgcaaccttcagatttca
gacctcggcctcaacgtcaactgccaggagcgaaagatcgagaacatttccgatttagaa
ccgaaaccttacaaccccaaaaagatgtatctcactgggaactatatccccgtggtgcgc
agaacggatttcattgaggcaactggattagatttgcttcatctgggcaacaatcggata
gctcaaatccacgacagagctttcggtgatttgactcatctcaggcgactctaccttaac
gggaatttgatagaccaccttaccgcagatgttttctatggactagagagtctgcagttc
ctatatttagaatacaacgtcattaaggaaatcacagcggacacgttccagcacgtccct
aaactccagctactgtttttaaacaacaacctcttgaaaacacttccggtaggagcattt
catggcctcacgttggcccgcctcaatcttcgcagcaaccacctgcgatatctaccggtc
agcggtgtgctggatcagctaacggcgctggtgcaggtggatttgtacgaaaacccctgg
gattgctcgtgtagcattctcgacttgaagatgtgggtggaacagctcagcacgggcact
gttgtcaacaatgtcatctgtggctcacccaagaggctcgctggggaagacatgcgatac
atcaagacagctaatttctgccctaataactcggtcatgccggcgtcaatgattccaccc
tcggaggaatccatccctggcagcaccatcacaatagaaacgtcactagactccgacaca
cagtacagtgccattcctttatccgtgatgatcctcgccctcttactcatgttcattatg
tccgtgttcgtggctgcaggactgtttgtaacagtgagaaagagacaccttaagaatcaa
aacgagcagaacaattccatgaacgcttgtattagctcgcttaacatggagtatggactg
tacaaaaagggatccgtcccaaaggtcagaacatcagccggacacgtgtatgaatatatt
ccacccccttccgagcaaacaagcagaactccaggtcacgcttctgccgacagcaaatct
gccgagggatttccggacttcgaccagctcagcggcgcctttctagggaactcggacgaa
gacgcggcgagtaatgtaataggctcggaatacagcaccgctgcttcggagccactcaat
aagcctttcggcatgaaacaagatgatccgtcgtgctacagagaagtcctcaatccggag
cagaagccccactacagccatacgctaccttgcagacatgcagcacgtcaggccggtcaa
cacacgtcagactttgacgtaaggcctcagtacgtgcatcccgacagagtccaacagaca
atattgtactgcacgacgccaagtactgtttacgtggagccaaacagaagcgaatattgg
gaactgaaggcaaagcttcacattgatccggattatcttgaggttcttgaaaaaagaaca
acatttacacagttttaa
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