Syngnathus scovelli (Gulf pipefish): 125973669
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Entry
125973669 CDS
T08785
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04145
Phagosome
sscv04210
Apoptosis
sscv04517
IgSF CAM signaling
sscv04530
Tight junction
sscv04540
Gap junction
sscv04814
Motor proteins
sscv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125973669
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125973669
09143 Cell growth and death
04210 Apoptosis
125973669
09144 Cellular community - eukaryotes
04530 Tight junction
125973669
04540 Gap junction
125973669
09142 Cell motility
04814 Motor proteins
125973669
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125973669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sscv03019
]
125973669
03036 Chromosome and associated proteins [BR:
sscv03036
]
125973669
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sscv04812
]
125973669
04147 Exosome [BR:
sscv04147
]
125973669
Messenger RNA biogenesis [BR:
sscv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
125973669
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
125973669
Cytoskeleton proteins [BR:
sscv04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
125973669
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125973669
Exosomal proteins of other body fluids (saliva and urine)
125973669
Exosomal proteins of colorectal cancer cells
125973669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
125973669
NCBI-ProteinID:
XP_049584066
LinkDB
All DBs
Position
8:complement(9899452..9903802)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPTPKSIGGHDDSFTTFFSETGAGK
YVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGREIIDSVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGEVVPKDVNVAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSYEEDEEGEEF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgcatctccgtccacgtaggtcaggctggtgtccagatgggcaacacctgc
tgggagctctactgtctggaacatggcattcagccagacggccagatgcccactccaaag
tcaattggaggccatgatgactccttcaccacctttttcagcgagaccggggctggaaaa
tatgtcccaagggcagtctttgtagacctggaacccacggttgttgacgaagtgcgcaca
ggcacatatcgccaactatttcaccccgagcagctgatctcaggaaaagaagatgcggcc
aacaactatgcccggggacactacaccatcggcagagagataattgactctgtcctcgac
aggatccgaaaactgtctgaccagtgcacgggtctccaaggatttttggtcttccactcc
tttggtggaggcaccggctctggtttcacctccctcctcatggagcgactttctgttgat
tatgggaagaaatccaaacttgagtttgcaatctacccagcccctcaagtttctactgca
gtggtagagccatacaactccattctgaccactcacaccaccctggagcactccgattgt
gccttcatggtggacaatgaagccatctatgacatttgtcgcaggaacctcgacatcgag
cgaccctcttacaccaacctcaaccgccttatcagtcagatagtgtcatctatcacagcc
tctcttcgctttgatggagccttgaatgttgatctgaccgagttccagaccaacttggtg
ccctaccctcgtatccacttccctctggccacatatgctcctgtcatttctgccgagaag
gcctaccatgagcagctttctgtggctgaaatcaccaacgcctgctttgagccagccaat
caaatggtcaagtgcgatccacgtcatggcaaatacatggcctgctgtctgctgtatcgt
ggtgaagtagtgcccaaggatgttaacgttgccatcgctgccattaagaccaagcgcagc
atccagttcgtggactggtgtcccactggtttcaaagtaggcatcaactatcaacctcca
acagtggttcctggaggagatctggccaaggtgcagagggcagtgtgtatgcttagcaac
accacagccatcgctgaggcctgggcccgtctggatcacaagtttgatctgatgtatgcc
aagagggcctttgtgcactggtatgtgggagagggaatggaggaaggagaattctcagag
gccagagaggatatggcagcactggagaaagattatgaagaggtcggaattgactcctat
gaagaggatgaggagggagaagaattctag
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