KEGG   Syngnathus scovelli (Gulf pipefish): 125973669
Entry
125973669         CDS       T08785                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04145  Phagosome
sscv04210  Apoptosis
sscv04517  IgSF CAM signaling
sscv04530  Tight junction
sscv04540  Gap junction
sscv04814  Motor proteins
sscv05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    125973669
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125973669
  09143 Cell growth and death
   04210 Apoptosis
    125973669
  09144 Cellular community - eukaryotes
   04530 Tight junction
    125973669
   04540 Gap junction
    125973669
  09142 Cell motility
   04814 Motor proteins
    125973669
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125973669
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sscv03019]
    125973669
   03036 Chromosome and associated proteins [BR:sscv03036]
    125973669
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sscv04812]
    125973669
   04147 Exosome [BR:sscv04147]
    125973669
Messenger RNA biogenesis [BR:sscv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125973669
Chromosome and associated proteins [BR:sscv03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     125973669
Cytoskeleton proteins [BR:sscv04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    125973669
Exosome [BR:sscv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125973669
  Exosomal proteins of other body fluids (saliva and urine)
   125973669
  Exosomal proteins of colorectal cancer cells
   125973669
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 125973669
NCBI-ProteinID: XP_049584066
LinkDB
Position
8:complement(9899452..9903802)
AA seq 449 aa
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPTPKSIGGHDDSFTTFFSETGAGK
YVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGREIIDSVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGEVVPKDVNVAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSYEEDEEGEEF
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgaatgcatctccgtccacgtaggtcaggctggtgtccagatgggcaacacctgc
tgggagctctactgtctggaacatggcattcagccagacggccagatgcccactccaaag
tcaattggaggccatgatgactccttcaccacctttttcagcgagaccggggctggaaaa
tatgtcccaagggcagtctttgtagacctggaacccacggttgttgacgaagtgcgcaca
ggcacatatcgccaactatttcaccccgagcagctgatctcaggaaaagaagatgcggcc
aacaactatgcccggggacactacaccatcggcagagagataattgactctgtcctcgac
aggatccgaaaactgtctgaccagtgcacgggtctccaaggatttttggtcttccactcc
tttggtggaggcaccggctctggtttcacctccctcctcatggagcgactttctgttgat
tatgggaagaaatccaaacttgagtttgcaatctacccagcccctcaagtttctactgca
gtggtagagccatacaactccattctgaccactcacaccaccctggagcactccgattgt
gccttcatggtggacaatgaagccatctatgacatttgtcgcaggaacctcgacatcgag
cgaccctcttacaccaacctcaaccgccttatcagtcagatagtgtcatctatcacagcc
tctcttcgctttgatggagccttgaatgttgatctgaccgagttccagaccaacttggtg
ccctaccctcgtatccacttccctctggccacatatgctcctgtcatttctgccgagaag
gcctaccatgagcagctttctgtggctgaaatcaccaacgcctgctttgagccagccaat
caaatggtcaagtgcgatccacgtcatggcaaatacatggcctgctgtctgctgtatcgt
ggtgaagtagtgcccaaggatgttaacgttgccatcgctgccattaagaccaagcgcagc
atccagttcgtggactggtgtcccactggtttcaaagtaggcatcaactatcaacctcca
acagtggttcctggaggagatctggccaaggtgcagagggcagtgtgtatgcttagcaac
accacagccatcgctgaggcctgggcccgtctggatcacaagtttgatctgatgtatgcc
aagagggcctttgtgcactggtatgtgggagagggaatggaggaaggagaattctcagag
gccagagaggatatggcagcactggagaaagattatgaagaggtcggaattgactcctat
gaagaggatgaggagggagaagaattctag

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