KEGG   Syngnathus scovelli (Gulf pipefish): 125973670
Entry
125973670         CDS       T08785                                 
Name
(RefSeq) tubulin alpha chain isoform X1
  KO
K07374  tubulin alpha
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04145  Phagosome
sscv04210  Apoptosis
sscv04517  IgSF CAM signaling
sscv04530  Tight junction
sscv04540  Gap junction
sscv04814  Motor proteins
sscv05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    125973670
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125973670
  09143 Cell growth and death
   04210 Apoptosis
    125973670
  09144 Cellular community - eukaryotes
   04530 Tight junction
    125973670
   04540 Gap junction
    125973670
  09142 Cell motility
   04814 Motor proteins
    125973670
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125973670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sscv03019]
    125973670
   03036 Chromosome and associated proteins [BR:sscv03036]
    125973670
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:sscv04812]
    125973670
   04147 Exosome [BR:sscv04147]
    125973670
Messenger RNA biogenesis [BR:sscv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     125973670
Chromosome and associated proteins [BR:sscv03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     125973670
Cytoskeleton proteins [BR:sscv04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    125973670
Exosome [BR:sscv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125973670
  Exosomal proteins of other body fluids (saliva and urine)
   125973670
  Exosomal proteins of colorectal cancer cells
   125973670
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 125973670
NCBI-ProteinID: XP_049584067
LinkDB
Position
8:9911291..9913762
AA seq 449 aa
MRECISLHIGQAGVHIGNACWELYCLEHGIQPDGRIPSDKATGDDDSFKTFFSEFGTGKH
YPRAIFVDLEPTVIDEVRTGRYRQLFYPEQMITGNEDAANNYARGHYSIGKKIIDQVLDR
TRKLADQCSGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKLKLEFAIYPAPQVSTAV
VEPYNSILTTHSTLEHFDCAFMVDNEAIFDICRRNLNIERPSYTNLNRLIGQIVSSITAS
LRFDGALNVNLTQFQTNLVPYPRMHFPLATYAPFISAEKAYHERLSVADITNACFEPDNQ
LVKCDPRYGKYMACCLLLFVGDVAPKDINSAIAAIKTKRTVQFVDWCPTGFKVGINYRPP
MVFPGGDLAKVQRAVCMLSNTTAFAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVCSDCIGDEDEDGEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgaatgtatctctctgcacattgggcaagctggagtccatattggcaatgcatgc
tgggagctttactgtctggaacacggcatccagccagatgggcggataccgtctgacaag
gctactggagacgatgactctttcaagactttcttcagtgagtttggaactgggaagcat
tatcccagggccatctttgttgatctggagcccactgtcatcgatgaggttcgtacaggt
cgctatcggcaactgttctatccagaacagatgatcacagggaacgaagatgctgccaat
aactatgcccgtgggcactacagtattggcaaaaaaatcattgatcaggtgctggacagg
actcgcaagctggctgatcaatgctcaggcttgcaaggattcctcatctttcactccttt
ggtggcggtaccggttctggtttcacctctttgctcatggagagactgtctgttgattat
ggaaagaaactaaagcttgaatttgcaatctacccagctcctcaggtgtctacagcagtt
gtagagccctataattccattttgactactcacagcacccttgagcactttgattgtgcc
ttcatggtggacaatgaagccatctttgacatttgccgcagaaacctcaatatagaaagg
ccgtcctacactaacttgaacagactgattggccagattgtgtcttcaattacagcatct
cttcgctttgatggtgccctgaatgttaacctgacgcaattccagaccaacttggtgccc
tacccccgtatgcacttcccgctggctacatatgcccccttcatctctgctgagaaagcc
taccatgagcgtctatctgtggccgacatcaccaacgcctgctttgagccagacaaccag
ttggtcaagtgcgaccctcgttatggtaaatacatggcctgctgtttgctgttgtttgtt
ggtgatgtggcacctaaagatatcaactctgctattgccgccatcaagaccaaacgcacc
gtccaatttgtggactggtgtcctacaggcttcaaagtgggcatcaactaccggcctccg
atggtgtttcccggaggagatctagccaaggtgcaaagggctgtgtgcatgctgagcaac
acaacggcatttgctgaggcttgggcccgtcttgatcacaagtttgatctgatgtacgcc
aaaagagcctttgtgcactggtatgtgggagagggaatggaggaaggagagttctcagag
gccagagaggatatggcagccctggagaaggattatgaagaagtttgttctgactgcatt
ggggatgaggatgaagatggagagtactga

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