Syngnathus scovelli (Gulf pipefish): 125973761
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Entry
125973761 CDS
T08785
Name
(RefSeq) amyloid-beta A4 protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
125973761
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125973761
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sscv00535
]
125973761
00536 Glycosaminoglycan binding proteins [BR:
sscv00536
]
125973761
Peptidases and inhibitors [BR:
sscv01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
125973761
Proteoglycans [BR:
sscv00535
]
Cell surface proteoglycans
Others
125973761
Glycosaminoglycan binding proteins [BR:
sscv00536
]
Heparan sulfate / Heparin
Others
125973761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_amyloid
Beta-APP
APP_Cu_bd
Kunitz_BPTI
Insulin_TMD
CDC45
Motif
Other DBs
NCBI-GeneID:
125973761
NCBI-ProteinID:
XP_049584180
LinkDB
All DBs
Position
8:complement(13063011..13072663)
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AA seq
752 aa
AA seq
DB search
MGAHKAFVLLLAATLTVSSEVPADDSAGLLTEPQVAMFCGKPNMHINVQSGNWEPDPSGS
KSCIATKEGILTYCQEVYPELQITNVVEANQPVSIQNWCKKGRKHCRGHKHIVVPYRCLV
GEFVSDALLVPDKCKFLHKEYMDQCESHLHWHAVAKESCGDHATNLHDYGLLMPCGIDLY
RGVEFVCCPIEAEEESDSAAIDGEESDVWWGGAEPENNDNGMAELTDTEPAAVEEEEDDE
EDDEETFETDENDDEEIDEEEEEEDDDMTNERDSDERDANLAMTTTTTTESIEEVVRAAC
WARADSGPCHDMLERWYFIPEKALCAPFLFGGCGGNRNNFDSEEYCLAVCSSSLPTMAPS
PPDAVDQYLESPGDDSEHGDFQRAKESLEAKHREKLSQVMKEWEEAERKAKNLPRAEKKA
VIQHFQEKVEALEQEAAGERQQLVETHMARVEALLNSRRRMALENYLSALQADPPRPRQV
LSLLKKYVRAEQKDRQHTVKHYEHVRTVDPRKAAQIRPQVLTHLRVIDERMNQSLGLLYK
VPNVASEIHSQVSVIVQRVQSELSQQVSSLQSDSRVDGRMSYGNDALMPDQAYSSAPMDL
GLGGLGFIHPESFNQANTENHVEPVDARPLPDRGLPTRPVSALKPEEMPQVRMETEERQS
AGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLRKKQYTSIHHGVIEV
DAAVTPEERHLAKMQQNGYENPTYKFFEQIHN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgggggcacataaggcgtttgtgctcttacttgcggcgaccttgacggtctcatctgag
gtgcctgctgatgactcagcgggcttgctgaccgagcctcaggttgccatgttctgtggc
aagcccaacatgcacatcaatgtgcagagtggcaactgggagccagacccttcaggctcc
aagagctgcatcgccaccaaggaaggcatcctgacttactgccaagaggtgtatccagaa
cttcagatcactaatgtcgtggaggccaaccagcctgtcagcatccaaaactggtgcaaa
aaaggccgcaagcactgccgcggtcacaaacacatcgtggtgccctaccgctgcttggtc
ggggagtttgtgagcgatgccttgctggttcctgacaagtgtaagttcttgcacaaggaa
tatatggaccagtgcgaaagccatctgcactggcacgctgtggccaaagagtcctgtgga
gaccacgccaccaatctccatgactacgggctgctgatgccgtgcggtattgatctttac
cgaggggtggagtttgtgtgctgcccaatcgaagccgaggaagagtccgatagcgcggcg
atcgatggcgaagagtcggacgtctggtggggcggagctgagcctgagaacaacgataac
ggcatggcggagctgacggacacggagccggctgctgttgaggaggaagaggatgatgag
gaagatgatgaagagacttttgaaacggacgagaatgacgatgaagaaattgacgaggag
gaagaggaggaagacgacgacatgaccaacgagcgggatagcgacgagcgtgacgctaac
ctcgccatgacaaccaccaccaccactgaatccattgaggaggtggttcgagccgcttgt
tgggcacgcgccgactcaggcccgtgtcacgacatgctggagcgctggtacttcatacct
gaaaaggccctctgcgcccccttcctgtttgggggctgcgggggcaacaggaataacttt
gattccgaggaatactgcctagctgtctgcagcagctcgctgcccactatggcgcccagc
cccccagacgccgtggaccagtacctcgagtcccccggcgacgacagtgagcacggcgac
ttccagagggcgaaggaaagcctggaggccaagcatcgggaaaagctgtcccaggtgatg
aaggaatgggaggaggctgagaggaaggccaagaacctcccacgtgctgaaaagaaagcg
gtcattcagcacttccaggagaaggtggaggccctggagcaggaggcggctggcgagagg
cagcagctggtggaaacccacatggcccgtgtagaggctttgctcaacagtcgccgacgc
atggccctggaaaactacctgagtgcactgcaggccgacccgccacggcctcgtcaggtg
ctgagtctgctgaagaaatacgttcgggcagagcagaaggatcgccagcacacagtcaaa
cattacgagcacgtccgaaccgtcgacccaaggaaggcggcgcagattcggcctcaggtt
ttgacccacttgcgtgtgatcgacgaaaggatgaaccagtcgctgggtttgctttacaag
gtgcccaacgtggccagcgagatccacagccaagtctccgtcatcgtgcaacgagttcag
tccgagctttctcaacaagtgtcctccctgcagagcgacagcagggtggacggcaggatg
agctacggcaacgacgcgctcatgcccgaccaggcgtacagctcggctcccatggacctc
ggcctcggcggtttgggcttcatccaccccgagagcttcaaccaggccaacactgagaac
cacgttgagccagttgatgcccgcccacttccagatcgaggactgcccacacggcctgtg
tctgcactgaagccagaagagatgccccaagtgcgtatggagaccgaggagaggcaaagt
gctggttatgaagttcaccatcaaaaactggtcttttttgccgaggacgtgggctccaac
aaaggcgccatcattgggctgatggtgggaggcgtcgtcatagcgaccgtcattgttatc
accctggtgatgctgaggaagaagcaatacacttctattcaccacggtgtcatcgaggtg
gacgcggcagtgacgcccgaggagcgtcacctggccaagatgcagcagaacggctatgag
aatcccacctacaagttcttcgagcagatccacaactaa
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