Syngnathus scovelli (Gulf pipefish): 125973766
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Entry
125973766 CDS
T08785
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125973766 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125973766 (u2af1)
Spliceosome [BR:
sscv03041
]
Complex A
U2 snRNP components
U2 related factors
125973766 (u2af1)
Complex B
125973766 (u2af1)
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Ortholog
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GFIT
Motif
Pfam:
zf-CCCH
Torus
RRM_1
zf_CCCH_4
zf-CCCH_2
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
125973766
NCBI-ProteinID:
XP_049584189
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Position
8:complement(13053026..13056272)
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AA seq
277 aa
AA seq
DB search
MPIKLYIALVVSFFIVKGWDGKTWGCCLEGFKLAKMAEYLASIFGTEKDKVNCSFYFKIG
ACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSADGLTCAISDMEMQEHYDEFFEEV
FTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRCEEDAEKAVIDLNNRWFNGQPIHAELS
PVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKGGRHRTRSRSRDRR
SRSRDRDRGDRGDRGGRGGGRDHDRRRSRDRERSGRF
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcaaactttatattgccctggtggtttctttttttattgtgaaggggtgggac
ggaaaaacgtggggttgctgcctggaagggtttaagctagccaagatggctgagtacttg
gcgtcgatttttgggacagagaaagacaaagtaaattgctccttttattttaaaattggt
gcctgtcgacatggggaccgttgttccagattacacaataaaccaactttcagccagacc
atcgccctcctgaacatttaccgcaatcctcagaacagcgcccagtctgctgatggcctc
acctgtgccatcagtgacatggaaatgcaggagcactatgatgagttttttgaggaggtc
ttcacagaaatggaggagaagtatggcgaggtggaggaaatgaacgtgtgcgacaacctg
ggagaccaccttgtgggaaacgtgtatgtgaagttccgttgtgaagaggatgccgagaag
gcagtgattgacttgaacaatcgctggttcaacggacaacccattcatgcggagctctct
cctgtcacagacttcagggaagcttgctgtcgccagtatgaaatgggagaatgcactcga
ggcgggttctgcaatttcatgcacctgaagcccatttcacgtgagctgaggagagagttg
tatggacgccgccggaagggaggtcgtcacaggacccgctcacgttccagagaccgccga
tcccgctcaagggaccgagacagaggagaccgaggagacagaggaggccgagggggtgga
cgtgaccacgatagacgccgctccagagacagagagcgctcgggacgtttctga
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