KEGG   Syngnathus scovelli (Gulf pipefish): 125973766
Entry
125973766         CDS       T08785                                 
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125973766 (u2af1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sscv03041]
    125973766 (u2af1)
Spliceosome [BR:sscv03041]
 Complex A
  U2 snRNP components
   U2 related factors
    125973766 (u2af1)
 Complex B
    125973766 (u2af1)
SSDB
Motif
Pfam: zf-CCCH Torus RRM_1 zf_CCCH_4 zf-CCCH_2 Nup35_RRM_2
Other DBs
NCBI-GeneID: 125973766
NCBI-ProteinID: XP_049584189
LinkDB
Position
8:complement(13053026..13056272)
AA seq 277 aa
MPIKLYIALVVSFFIVKGWDGKTWGCCLEGFKLAKMAEYLASIFGTEKDKVNCSFYFKIG
ACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQSADGLTCAISDMEMQEHYDEFFEEV
FTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRCEEDAEKAVIDLNNRWFNGQPIHAELS
PVTDFREACCRQYEMGECTRGGFCNFMHLKPISRELRRELYGRRRKGGRHRTRSRSRDRR
SRSRDRDRGDRGDRGGRGGGRDHDRRRSRDRERSGRF
NT seq 834 nt   +upstreamnt  +downstreamnt
atgccaatcaaactttatattgccctggtggtttctttttttattgtgaaggggtgggac
ggaaaaacgtggggttgctgcctggaagggtttaagctagccaagatggctgagtacttg
gcgtcgatttttgggacagagaaagacaaagtaaattgctccttttattttaaaattggt
gcctgtcgacatggggaccgttgttccagattacacaataaaccaactttcagccagacc
atcgccctcctgaacatttaccgcaatcctcagaacagcgcccagtctgctgatggcctc
acctgtgccatcagtgacatggaaatgcaggagcactatgatgagttttttgaggaggtc
ttcacagaaatggaggagaagtatggcgaggtggaggaaatgaacgtgtgcgacaacctg
ggagaccaccttgtgggaaacgtgtatgtgaagttccgttgtgaagaggatgccgagaag
gcagtgattgacttgaacaatcgctggttcaacggacaacccattcatgcggagctctct
cctgtcacagacttcagggaagcttgctgtcgccagtatgaaatgggagaatgcactcga
ggcgggttctgcaatttcatgcacctgaagcccatttcacgtgagctgaggagagagttg
tatggacgccgccggaagggaggtcgtcacaggacccgctcacgttccagagaccgccga
tcccgctcaagggaccgagacagaggagaccgaggagacagaggaggccgagggggtgga
cgtgaccacgatagacgccgctccagagacagagagcgctcgggacgtttctga

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