Syngnathus scovelli (Gulf pipefish): 125973804
Help
Entry
125973804 CDS
T08785
Symbol
trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10 isoform X2
KO
K20307
trafficking protein particle complex subunit 10
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125973804 (trappc10)
Membrane trafficking [BR:
sscv04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
125973804 (trappc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
TPR_19
TPR_7
TPR_10
Foie-gras_1
Motif
Other DBs
NCBI-GeneID:
125973804
NCBI-ProteinID:
XP_049584260
LinkDB
All DBs
Position
8:18749096..18756546
Genome browser
AA seq
1278 aa
AA seq
DB search
MDSGQEKPAAAAAVIYAMENKPIVTCAGDQALFTSLYTALAQQLPREPMEWRRTYGRAPK
MIHLEANFVQFKEELLPKDGTKALLTFPFLHIYWTDCCDAEAYRGSVKEDVSRWQSSLRA
HGSADWLIIVVDGGDARKKNKGNILPRSSIVDKIRGDFCNKQNDRCVVLSEPLKDSSRSQ
ESWNSLLLKLRTLLLMSFTKNLGRFEDDMRTLREKRTQPGWSFCQYFMVQEELAFVFEML
QQFEDALVQYDELDALFTQYVLNFGAGDAAKWLGSFCSPVLNWSGLLLRRPIDMEKRDSI
QRGSASLLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVSVLRGALDC
WVFLSCLEVLHRIESCCDRAQLAANASHTVGLWAYAADKLKALGHLCGLVSCKGPTSEDL
NRTVDLLAGLGDERPETVNSLQSPYKKLKEALSSVEAFERHYLELCQAAMEMYRAVGRLR
SARLLGKSLAEFYMSKGEPERAEALLAEALRSYVCEGWTFPVTHTRKQMGECQKLLRRSA
DSLRTSALLAGDGNLSAEERTSFCRDVLDYAGQPADEGGDPSATLDMGVLAQLTRIRFGP
DGACVHSGAALRVELTLRCLMPVAVRVDELAVGVHLDAERVTKGGARGAALPGTVDFEAA
VTAPGRPSSLSAGPPPEMDEAHDRSPSDDSLSSAGVVCRNAHLLVRRHDSGSPPDASGPP
ARNGASGAPPAALKEGAPVLRASGITLEPGDNSVVLAAASNEAGTYTLRQLCVTLANVNF
VLPHIYPSVQYHVYSQEPQLSVRPLSEPLLAGLPQRVKFTLLTGHYAVRKGDALQLSNSD
SMPVLAHVGCTARIANNGGAVAESALSVQSSDKVTSIGLPPTPPYHTLEFHLEVLCLIPP
GPERLADERLTNGEAPRRPRSYSHPDTAMAAIDQRMSIDCPWSIYSTLLSLTFHIPFKTE
HSLLSAGNRKYIQVCVHNVSDCDFTLAHVKLAEKGPQRRASLEMPCLNACARQLLCSKQS
VYFLWEATCKEALPSSLECVFSASFCPRGRCEDAAFEPFHYHFLMDNVPTLYSVRADMVP
PAGERHCRSGSLCGLEVVIERAARPADGEPAAAAADDKTDAEGLGSGKVMYEVADSSSNW
AVCGRSSGLVSMPSSSGSWAHKVHIEVMPLFAGHLPFPKIKVLKYLPHNASSVQADADSQ
VENDSLSLLDKTLDDAAADTASVRSRGSVQSLGEQQHRGVALPRLDPFGPGQVFNHSHAR
QVLVLPAADEHIVEVHAT
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atggacagtggtcaagagaaacccgccgccgccgccgccgtcatctacgctatggagaac
aaacccatcgtcacatgtgccggggaccaggccttgttcacgtctctctacacagccctg
gctcagcagctgccccgcgagcccatggagtggaggaggacgtacggccgcgctcccaag
atgatccacctggaggccaactttgtccagttcaaggaggagctgctgcccaaggacggc
accaaggccctgctcaccttccccttcctgcacatctactggaccgactgctgcgacgcc
gaggcgtaccgcggctcggtgaaggaggacgtgagccgatggcagagcagcctgcgagcg
cacggctcggccgactggctcatcatcgtggtggacggcggcgacgcgcgcaagaagaac
aaaggcaacatcctgccccgctcgtccatcgtggacaaaatccgcggcgacttctgcaac
aagcagaatgacaggtgcgtggtgctgtcggagccgctgaaggactcgtcgcgctctcag
gagtcatggaactcgctgctgctcaagctgaggacgctcctgctcatgtccttcaccaag
aacctggggcgcttcgaggacgacatgcgcaccctcagggagaaacgcacccagcccgga
tggagcttctgccagtacttcatggtccaggaggagctggcgttcgtctttgagatgttg
cagcagtttgaagacgccttggtccagtacgatgagctggacgcgctcttcacgcagtac
gtgctcaactttggagccggagacgcggccaagtggctgggctccttctgctctccggtg
ctgaactggagcggcctgctgctgcggcgccccatcgacatggagaagcgcgacagcatc
cagcgcggctccgccagccttctggacctgcgcagctacctcttctcgcgccagtgcacc
ctgctcatcttcctgcagaggccctgggaggtgacccagcgggccctggagctgctgcac
aactgcgtgcaggagctgcgtctgctcgaggtgtcggtgctgcggggggcgctggactgc
tgggtcttcctcagctgcctggaggttctgcaccgcatcgagagctgctgcgaccgggcc
cagctggccgccaacgcctcgcacacggtgggactgtgggcctacgccgccgacaagctc
aaggctctgggccacctctgcgggctggtgtcgtgcaaaggtcccacctcggaagacttg
aaccggacggtggacctgctggccggtctgggggatgagcgccccgaaaccgtcaacagc
ctgcagagtccctacaagaagctgaaagaagccttgtcctccgtggaagcttttgaaagg
cattacctggagctgtgccaggcggccatggagatgtaccgagccgtcgggagactgcgc
tctgcccgactgttgggaaaaagtctggcggaattctacatgagcaagggcgagccggag
cgagcagaagccttgctggccgaggctctgcgttcgtacgtttgcgagggctggaccttt
ccggtcacccacacccgcaaacagatgggcgagtgccagaagctgctgaggcgaagcgcc
gactccttgcgcaccagcgccttactggcgggtgacggcaacctcagcgcggaggagagg
acgagcttttgccgcgacgttctcgactacgccggccagcctgccgatgaaggcggcgat
ccgtccgccacgctggacatgggcgtcttggctcagctcacgcggatccgattcgggccg
gacggcgcctgcgtgcactctggggcagccctgcgggtggagctgacgctgcgttgcctg
atgcctgtcgccgtgcgggtggacgagctggccgtcggcgtccacctggacgccgagcgg
gtcaccaaggggggcgctcgcggagcggccctccccggcacggtggactttgaggcggcc
gtcactgcgccggggcggccgtcctccctgagcgccggccccccgccggagatggacgag
gcgcacgaccgcagcccctcggacgattccctcagctcggcgggcgtggtgtgcaggaac
gcccacctgctggtgcggcgccacgacagcggctcgcctccggacgcctccggccccccg
gcccggaacggcgcctcgggcgcgccgcccgcggccctgaaggagggcgcgccggtgctg
agggcgagcggcatcacgctggagcccggagacaacagcgtagtcctggccgcggcgagc
aatgaggcgggcacctacacgctgcggcagctgtgcgtcaccttggccaatgtcaacttt
gtcctgcctcacatctacccctcggtccagtaccacgtctactctcaggaaccgcagctc
agcgtccgtccgctttcagagccgctgctggcgggcctcccgcagagggtcaagttcacc
ctgctgacgggccactacgccgtgaggaagggcgacgccctgcagctcagtaacagcgac
agcatgccggttctggcccacgtcggctgcacggcacgcattgccaacaacggaggcgcc
gtggcggagagcgcattgtccgtccagtcctcggacaaggtgaccagcattggcctgcct
cccacccctccctaccacacgctggagttccatctggaggtcctgtgcctcatcccacct
gggccggagcggctcgcagacgaaaggttgaccaacggcgaggcgccgcgccggcctcgt
agctacagtcaccccgacacggccatggccgccatcgatcagaggatgtccatcgactgt
ccgtggtccatctattccaccctgctgagcctcactttccacatccccttcaagacggag
cactcgctactatcggccggaaacaggaagtacatccaggtatgcgtgcacaatgtgtcg
gattgcgacttcacgctggcccacgtcaaactggccgagaaagggccacagcggcgggcc
tctctggagatgccgtgcctcaatgcctgcgcccggcagttgttatgcagtaagcagagt
gtgtacttcctgtgggaggccacgtgcaaggaggctctcccgtccagtctggagtgcgtc
ttctcggccagcttctgtccccgcgggcgctgcgaggacgccgccttcgagcccttccac
taccacttcctgatggacaacgtgcctaccttgtacagcgtgagagccgacatggttccg
ccggcgggtgagcgtcactgtcgctccggctccctctgcggcctggaggtggtcatcgag
cgagcggcccggcccgcggacggcgaaccggccgccgctgccgcagacgacaaaacagac
gccgagggcctcgggagcggcaaagtcatgtatgaagtggcagacagcagcagtaactgg
gcagtgtgcggtcggagttcgggcctggtgtccatgccgtcgtcgtcgggctcttgggct
cacaaagtccacatcgaggtcatgccgctcttcgccggccatcttcccttccccaagatc
aaggtcctcaagtatcttcctcacaacgccagcagcgtccaagcagacgccgacagccag
gtggaaaacgacagcctgtctctcctggacaagactttggacgacgcggcggccgacacg
gccagcgtgcgcagtcgcggcagcgtccaatcgctgggcgagcagcagcacaggggcgtg
gccctgccccgtctggaccccttcggtcccggtcaggtgttcaaccacagccacgctcgg
caagtcctggtcctgcccgccgccgacgagcacattgtggaggtccacgccacgtga
DBGET
integrated database retrieval system
