Syngnathus scovelli (Gulf pipefish): 125973890
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Entry
125973890 CDS
T08785
Name
(RefSeq) TBC1 domain family member 8
KO
K19951
TBC1 domain family member 8/9
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125973890
Membrane trafficking [BR:
sscv04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
125973890
Endosome - Golgi transport
Rab GTPases and associated proteins
125973890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
Motif
Other DBs
NCBI-GeneID:
125973890
NCBI-ProteinID:
XP_049584546
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Position
8:complement(16917467..16924489)
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AA seq
1112 aa
AA seq
DB search
MWLNPEEVALKNALKLWVTERSNDFFLLQRRRGRGEPAGKISGLLVGALDTVLDSNARVT
PFRILLQIPGSQISWIIAGGATMEEVNKHWDWLAHNLLHSLSVFENKEDGASFVRGKVKG
LIAEESRGRQAAQEDDPEKFREALLKFERHFRLPSSEKLVTFYSCCTWKGRVPRQGLLYL
SINHLAFYSFLLGKEVKFVIPWAEVIRLERVSGGFMTEGIRVSTRQRQRDFSMFLNLDEA
FGVVGQLADIALRRLLDSEGLELDRVLQQPARITKRVLEEQALREYVLALFRLPRSERLH
EVASCAVWTPHARCHTAGTLYTTDNYLGFSSREEGQCILLIPLTEVLSVEKAESTCTLPN
PVIVSVRSKKAFQLIELQERDELVESLDCRLRSLHLKQSAFRTSRRAKRTSSCLNPYYTF
YYDTVCSDEEELEEQVLRNTVNSEALMTAFHHNTPGSNNNEHTEVLKEKMWEEHFAEFGR
GVHMFRTDKLQRLIALGIPESLRGELWMTLSDTTSDLDSDPGYYAALVQTSMGQSSLTTD
EIERDLHRSLPDHPAFQNPTGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYAKEEE
AFWLLVAICERMLPDYFNRRVIGAQVDQSVFEQLISERLPDLADHFPDLSTLSSVSLSWF
LTIFVSVLPFQSAVCVVDWFFFHGIKAIFQLALAVLEANAASLCARVDDGHALMVLASFL
EHVGSDQSSPGEFSQSPSNGSGNNMMDAPAAGQANITQLITDAYERFGDLTVRKIERLRC
RHRIQVLQAHEDTTKENALRVVTPDVSISAEHLADIYDLFKTEHFISLYWGDISAVAAAE
AASWRRGVSYLERQYRLDLPQFKSLYGLLTPWPAGGCHGDTLAHRTFNLLDSDRQHLLSF
RDFALWLDTLYCGELSDKVKLLYRLHLPPALTDSEERSSEMNIPSVSSDRPLRVGVASEK
ADGKEEAKDYQEQLKLMLRDLVMAKEKEKDVQQPLPLMKQHEFIQFCKTLCSLFHGDPEE
NELFQAIAKVTSLVLQIGEATTRPPGPNRDLSGPPDSEWIISLAQILASLLTEQTLVNFL
ERACDLTSRIATAKEKQYQQRAPLLALQHAQR
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaacccggaggaagtggctctgaaaaacgcgctgaagctgtgggtcaccgag
cggagcaacgacttcttcctgctgcagagaaggagaggccgcggggaacccgccgggaaa
atcagcggcctcctggtgggggcgctagacacggtgctggactccaatgccagggtgaca
cccttccgaatcctcctccagatcccgggctcgcagattagttggatcatcgctggcgga
gccaccatggaggaagtgaacaagcactgggattggctggcacacaacctgctgcactcg
ctgtccgtctttgagaacaaagaggacggagccagttttgtccgaggaaaagtcaagggc
ctgatcgcggaggagtcgcgcggtcgccaagctgcccaggaggacgacccggagaagttt
cgcgaggctctgctgaagttcgagcgccactttagactgccgtcgtcggagaaactggtc
accttctactcgtgctgcacgtggaaggggcgtgtgccgcgccagggcctgctctacctc
agcatcaaccacctggccttctactcattcctgctaggcaaagaagtcaagtttgtcatt
ccctgggcggaggtgattcggctggagcgggtctccggcggattcatgacagagggcatc
cgggtgagcaccaggcaacggcaacgggacttctccatgttcctcaacttggacgaggct
tttggggtggtgggccagctggccgacatcgccctgcgtcgcttgctggacagtgaaggc
ctggagctggaccgggtgctgcagcagccggctcgcatcaccaaaagggttctggaggag
caggcgttgcgagagtacgttctggccctgttccgcctcccccgcagcgagaggctccac
gaggtggcgtcgtgcgccgtgtggacgccgcacgcccgctgccacacggccggcacgctc
tacaccaccgacaactacttgggcttctccagccgagaggagggccaatgcattctcctc
atacccctcacggaggtgctgtcagtggagaaggcggagagcacatgcacgcttcccaac
ccggtgattgtgagcgtgcgctccaagaaggccttccaactcatcgagctgcaggagcgc
gacgaactggtggagagcctggactgcaggctgcgctcgctgcacctcaagcagtcggcc
tttcgcaccagccggcgtgccaagaggacctcgagctgcctcaatccttactacaccttc
tactacgacacggtgtgctcggatgaagaggagctggaggagcaggtgcttcggaatacc
gtcaatagcgaagctctcatgactgccttccatcacaacaccccaggaagtaacaacaac
gagcatacggaggtgctgaaagagaagatgtgggaggaacactttgccgagtttggccgt
ggcgtccacatgtttcgcaccgacaagctccagcggctgattgctctgggcatacccgag
tcgcttcgaggcgagctctggatgacgctctcggacacaacctcagatttggattcggac
ccgggctactacgcagctttggtgcagacatccatgggtcagagcagcctgaccacggac
gaaatcgagcgggacctccaccgctccctaccggaccatcctgccttccagaaccccacc
ggcattgcggcactccgccgcgtactcaccgcctacgcccaccgtaacccgaagatcgga
tactgtcaatcaatgaacatcctggcatccgtgctgctgctgtacgccaaagaagaagaa
gctttctggctgttggtggccatttgtgagcggatgcttcctgactacttcaacaggagg
gtcatcggtgctcaggtggaccagtcggtgttcgagcagctcatcagcgagcgtctccct
gatctggctgatcattttccggacctttccacattgtcgtcggtgtctctgtcctggttc
ctgaccatctttgtcagcgtgctgcccttccaaagtgctgtgtgcgtggtggactggttc
ttcttccacggcatcaaggccatctttcagctggctctggccgtgttggaggccaacgct
gccagcctctgcgcccgtgtggatgatggacatgcacttatggtccttgcaagttttctg
gagcatgttggaagtgaccagtcgtctcctggtgagttctctcaatccccttcaaatggc
agcggcaacaacatgatggatgctcccgctgcgggccaagctaacataacacagctcatc
actgacgcctatgaaaggttcggggatttgacggtgaggaagatcgagagacttcgctgt
cgacacagaattcaagttctgcaggcacacgaggacacaaccaaagaaaacgctttaaga
gtggtgacgccagatgtttccatctctgcggaacacctggctgacatctatgacctcttc
aagacggaacatttcatcagcctatactggggcgacatcagcgcggtggctgcggccgag
gcggcgtcttggcggcgcggcgtctcgtacttggagcgccagtaccgactggacctgccg
cagttcaagagcctgtacgggctgctgaccccttggccggcggggggttgccatggcgac
actctggcccaccgcaccttcaatttgttggactcggacagacaacatctgctctcattc
agggactttgccctctggcttgacactttgtactgcggggagctgagcgacaaggtgaag
ctactttaccgtcttcacttaccacccgctctgacggacagcgaggagcgctcgtctgag
atgaacattccttctgtgtcgtctgacagacctctccgcgtgggcgtggcttccgaaaag
gctgatgggaaagaggaggccaaggactaccaggagcagctgaagctgatgctgcgggat
ttagtcatggccaaagagaaggagaaggatgtccagcagccgctccccctcatgaagcag
cacgagttcatccagttttgtaagacgctgtgcagcctgttccacggtgaccccgaggag
aacgagctcttccaggcaatcgccaaagtcacaagcctcgtcttgcaaattggcgaggcc
actaccaggcccccgggaccgaaccgggacctttcggggccgccagacagtgagtggatc
atcagcctggcccaaattctggcatctctgctgactgagcaaacgctggtcaacttcttg
gagagggcgtgcgatctgacgagccgcatcgccaccgccaaggagaagcagtaccagcag
agggcgccgctgctcgccctgcagcacgcccaacgctaa
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