Syngnathus scovelli (Gulf pipefish): 125973891
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Entry
125973891 CDS
T08785
Symbol
ttf2
Name
(RefSeq) transcription termination factor 2 isoform X1
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sscv03021
]
125973891 (ttf2)
Transcription machinery [BR:
sscv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125973891 (ttf2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
125973891
NCBI-ProteinID:
XP_049584547
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All DBs
Position
8:17036419..17043089
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AA seq
1093 aa
AA seq
DB search
MEKVTCDVHGGVCLLKTGVKDGPSQGKSFYVCVDKRGCDFIKVASIAASHCLLHEDSMVE
LQALSFRQQQQQCRLFYRCVEGRKSGQQWCGHVPWTVPENEENKCEKTAQAASLPPVRNP
FKVPEKVGQELKGTQIESKSKDKMAKKSPVDEGQDRPITDDDTYRAKHLPVGMKVKKKSV
DKTSPSTSKPKSDMTTPGVTTSVPKSDMATSEDCTTTEISTSVPKSDTAIKSNMAASVSS
VSESSASESVLKKEMVASGGLSKASASVPAPKNKTVASGGSDDARWRPRQSNQFQDDDEE
DEDVVLVSVKPPQKTATAIQKPLTSYSGFQPASNVKDPLRDPRGMHRMLSTQLQQKKATL
AAVNVEALPDKGERLRTQVQELEAALESLNLSPADEMPSSSQGENAPSRPGATILIPALP
AQRQQLQPSQGFARMPEAHQAFYGGRMTDNRLLAVKNATSEAIDHLHRSLKSCPAPDAET
PDPKGLKVSLLAHQRRALAWLLWREAQNPCGGILADDMGLGKTLTMIALVLAQKINAKAK
DGEDKKKEEEEKHETWLSKTDSRAVPSKSTLVICPASLVHHWKKEIERHVKGSRLSVYLY
HGPDRKKNARMLAQHDVVVTTYALVSRETPSQKEADKPNQEANNAAAANGGPLVRVAWAR
VILDEAHNIKNPKVQQSMAVCQLTAAARWAMTGTPIQNNLLDMYALLKFLRCSPFDEFKL
WKAQVDNGSKRGRERLNILTRTLLLRRTKDQRDSSGQPLVALPDRTCKVHQLQLSEDEQA
VYDVVFAQSRSTLQNYLKRHEGSDMKGKRVSASNPFDKVSQEFASSQTDSPAPSSQQPPQ
TASTAHILSLLLRLRQCCCHLSLLQKTLDASELQGDDVVLSLEEQLNALSLTSTSDAGED
TVGLNGTRFPSRLFEEGSRSTKISAIVSELEAIRAKGDNQKSVIVSQWTSMLQIVAVHLK
QMGLRYGVINGAVNPKRRMDLVEEFNSNPKGPQVMLVSLCAGGVGLNLVGGNHLFLMDMH
WNPALEDQACDRIYRVGQKRDVTIHRFECKGTVEQKIATLQTKKKQLAQSVLSGTGNAVT
KLSLADLKIIFGI
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagttacctgtgatgtccacggtggcgtatgtttgctaaagacaggggtgaaa
gatggaccaagtcaaggcaaaagcttctacgtgtgtgtggacaagcgtggctgtgacttc
atcaaagtggccagtatcgcggcctcccactgcctcctccacgaggactccatggtcgag
ctgcaagcgttgtcttttcgccagcagcagcagcagtgcaggttgttctacaggtgtgtg
gaaggtagaaaatccgggcagcaatggtgtggacatgtaccttggactgtgccggagaac
gaagagaataagtgtgaaaaaacggcacaagctgcttctctgccacctgtgcgaaacccc
tttaaagttccagaaaaagtgggccaagaattgaaggggacgcaaatagaaagtaagagc
aaagacaaaatggcgaagaaaagtccggtagatgaaggccaagataggccaatcacagat
gacgacacatacagggccaaacatcttccagtagggatgaaggtgaagaaaaaatctgtc
gataaaacatctccaagcacttcgaagcccaaaagcgacatgaccacccccggcgtcact
acgtctgtgcccaaaagcgacatggccacttctgaagactgtacaacaacagaaatctct
acttctgtgcccaaaagtgatacggccatcaaaagcaacatggccgcctccgtaagttcc
gtatcggagtcaagtgcctccgaatctgtgctcaaaaaggaaatggttgcctctggaggt
ttgtccaaagcaagtgcttccgtgcctgcgccaaaaaacaaaacggttgcttcgggaggg
tcggacgacgcaagatggagaccccgtcaaagcaaccagttccaagatgacgacgaagag
gacgaagatgtggtgctggtgtccgtaaaaccccctcaaaagaccgccaccgccatccag
aagccactgacctcctactctggctttcagccggcctccaatgtgaaagatccactgagg
gacccccgggggatgcacaggatgctgtccactcagctccagcagaaaaaggccaccctg
gcagcggtgaacgtggaggcgctgcccgacaaaggcgagcgtctgaggactcaggttcaa
gagctggaggcggcgctggagtctctcaacctcagtcccgcagatgagatgccaagcagc
agccagggtgagaacgcccccagccgcccgggcgccaccatcctcatcccagcgcttccc
gcccaaagacagcaacttcagccaagccagggcttcgcccggatgcctgaagcacaccag
gccttctacggcggccgtatgacggacaaccgtctgctggcggtgaagaacgccacaagc
gaggccattgaccatctgcacaggtcgctaaagtcctgcccggcccccgacgccgagact
ccggaccccaaggggctcaaggtttcgctgctggcccaccagaggagagctttggcctgg
ctgctctggagggaagcgcaaaatccgtgtggaggcattttggccgacgacatgggcctg
gggaaaacgctcaccatgatcgcgctcgtcctggcgcagaagatcaacgcaaaggctaaa
gacggagaagacaagaaaaaggaggaggaggagaagcatgagacctggctgtcaaaaact
gattcccgagcggtgccgtccaaaagcaccctggtcatctgcccggcctcgctggtccac
cactggaagaaggagattgagcgacacgtaaaggggagccggctcagcgtgtacttgtac
cacgggcccgaccgcaagaagaacgcccgaatgctggcccaacacgacgtggtggtgacc
acgtacgccttggtgtcccgagaaacgcccagccagaaggaagcggacaagcccaaccag
gaggccaacaatgcggcggcggcgaacggcggccccctcgtacgtgtggcgtgggcgcgg
gtgatcctggatgaggcgcacaacatcaagaaccctaaggtacagcaatccatggccgtg
tgccagctgacggcggccgcccgctgggccatgaccggaacgcccatccagaacaacctg
ctggacatgtacgcgctgctcaagttcctgcgctgttctccgtttgacgagttcaaactg
tggaaggcgcaggtggataacggctccaagcgcggcagggagcgactcaacatcctgacc
aggactctgctgctgcgacgcaccaaagaccagcgggattcttctggacaaccgctggtg
gcgcttcccgaccggacctgtaaggtgcatcaactgcaactgtcggaggacgagcaagcc
gtctatgacgtggtctttgcccagtccagatctactctacagaactacttgaagaggcac
gaagggagcgacatgaagggaaagcgcgtttctgcttccaatccctttgataaggtgtcg
caggagtttgcctcgtcccagaccgactcgcctgcgccctcgtcccaacaacctccgcag
acggccagcaccgcccacatcttatccctgctgctgcgtctgcgacagtgctgctgccac
ctttcactgctccaaaagactctggacgcttcggagctgcaaggcgacgatgtggtcctg
tccctggaggagcagctcaacgctctgtccctcacgtccacgtcagatgccggcgaggac
acggtgggcctgaacgggacacgtttcccttcacggctctttgaggagggcagcaggagc
accaagatttctgccattgtctcagagttggaggccattcgagctaaaggtgacaaccaa
aaaagtgtgatcgtgtcccagtggaccagtatgctccaaatcgtggccgtccatctgaag
cagatgggcctgcgctacggcgtcatcaatggagccgtcaaccctaaacgccgcatggac
ctggtggaggaattcaacagcaaccccaagggacctcaggtgatgctggtgtctctctgc
gccggaggagtcggcctcaatttggtgggcgggaatcatctcttccttatggacatgcac
tggaacccagccctagaggaccaagcctgcgaccgaatctaccgagtgggacagaagaga
gatgtcaccatccacaggttcgagtgcaagggcacagtggagcagaagattgccacgctg
cagaccaaaaagaagcaactggcccagagcgtgctgtccggaacaggcaacgctgttacc
aagctttccctcgcagatctcaagattatatttggcatttga
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