KEGG   Syngnathus scovelli (Gulf pipefish): 125973926
Entry
125973926         CDS       T08785                                 
Symbol
lamp1b
Name
(RefSeq) lysosome-associated membrane glycoprotein 1b
  KO
K06528  lysosomal-associated membrane protein 1/2
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03272  Virion - Hepatitis viruses
sscv03273  Virion - Lassa virus and SFTS virus
sscv04140  Autophagy - animal
sscv04142  Lysosome
sscv04145  Phagosome
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    125973926 (lamp1b)
   03272 Virion - Hepatitis viruses
    125973926 (lamp1b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    125973926 (lamp1b)
   04142 Lysosome
    125973926 (lamp1b)
   04140 Autophagy - animal
    125973926 (lamp1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sscv04131]
    125973926 (lamp1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sscv04147]
    125973926 (lamp1b)
   04090 CD molecules [BR:sscv04090]
    125973926 (lamp1b)
Membrane trafficking [BR:sscv04131]
 Endosome - Lysosome transport
  Others
   Lysosomal membrane proteins
    125973926 (lamp1b)
 Autophagy
  Chaperone mediated autophagy (CMA)
   Cargo receptors
    125973926 (lamp1b)
  Other autophagy associated proteins
   RNautophagy/DNautophagy
    125973926 (lamp1b)
Exosome [BR:sscv04147]
 Exosomal proteins
  Exosomal proteins of hepatic cells
   125973926 (lamp1b)
CD molecules [BR:sscv04090]
 Proteins
  125973926 (lamp1b)
SSDB
Motif
Pfam: Lamp2-like_luminal Lamp2_2nd VAS1_LD Adeno_E3_CR2
Other DBs
NCBI-GeneID: 125973926
NCBI-ProteinID: XP_049584614
LinkDB
Position
8:complement(16724175..16727578)
AA seq 242 aa
MTTTGFVQTRWLTFTLHLVLAAMAVHQGLATVAPQKEPGRPLTGHYQVTGTNGSVCLLAH
MGLQLNISFNSISSNQTVHVVNLEPNATEASGSCDSDSAMLRLSTDANPTNLTFFFVLNV
TSNKYHLSEISLSAHWPDMKGPFFARNNSLDYLQGTLGFSYMCHEEQTLNVVQALSINTF
QLQVQPFNVTQNKFGTAEHCQLDEDDMLIAIVVGAALAGLVLIVLVAYLIGRRRSHAGYQ
SI
NT seq 729 nt   +upstreamnt  +downstreamnt
atgacgacaaccggttttgtccagacacggtggctgacatttaccctgcatcttgtttta
gccgctatggccgtgcaccagggtttggctaccgtggcaccgcaaaaagagcctggcaga
ccgctgacagggcactaccaggtgaccggcaccaatggcagtgtctgcttgctggcgcac
atgggccttcagctgaacatcagcttcaactccatctcctcaaaccagacggtgcatgtc
gtcaaccttgagcccaacgccacagaagcttccggatcatgtgactcagacagcgcaatg
ctgcgactctcgacggacgccaatccaaccaacctgacctttttcttcgtgctcaacgtt
acgtccaataagtaccacttgagcgaaatttctctgtcagctcattggccagacatgaaa
ggacccttttttgcacggaacaacagcctggactaccttcagggaaccctaggattctcg
tacatgtgccacgaggagcagactctcaatgtggtccaggccttgtccatcaacactttc
cagttgcaggtgcagcccttcaacgtcacccagaacaagtttggcacagccgagcactgc
cagctggatgaagatgacatgctgatcgccatcgtggtcggggcggccctggctggcctg
gtcctcatcgtgctggttgcctacctcatcgggaggaggaggagccatgctgggtaccag
agcatttga

DBGET integrated database retrieval system