KEGG   Syngnathus scovelli (Gulf pipefish): 125973960
Entry
125973960         CDS       T08785                                 
Name
(RefSeq) ATP-binding cassette sub-family C member 4 isoform X1
  KO
K05673  ATP-binding cassette, subfamily C (CFTR/MRP), member 4
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv02010  ABC transporters
sscv04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    125973960
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    125973960
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:sscv02000]
    125973960
Transporters [BR:sscv02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    125973960
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_21 AAA_29 MMR_HSR1 AAA_22 AAA_16 AAA_23 nSTAND1 RsgA_GTPase DO-GTPase2 DUF87
Other DBs
NCBI-GeneID: 125973960
NCBI-ProteinID: XP_049584648
LinkDB
Position
8:11628027..11653611
AA seq 1309 aa
MEALRQDVKDNPFSKANLFSKLFFCWLNPLFKTGYKRRLEQDDMYKVLPEDASDRLGEEL
QWYWDQEVKLATKAQRQPELTRVIVKCYWKSNARIGVYLVIQEVIKVIQPVLLGKLIEYF
ESPDTTGPTAIHKAYWYAAGVCLSTISMAILHHLYFYHVQRAGMKIRVAMCHMIYRKALS
LNNMALTKTTTGQIVNLLSNDVNKFDEVTLYLHFLWIAPLEAALVIILLMYWIGPSCLAG
MAVFFVLIPVQAMFGRVFSRLRADTAILTDDRIRTMNEVIAGIRVIKMYGWEEAFAALVD
EVRRMEISKIMKSSYLRGLNMASFFMASKLIIFLTVCVYVLTGNRLSSSIAFMAVSLYSA
VRLTITLFFPFAIEKVSEALISIQRIQNFLHLDEVAPQHLELPAEEKKDCMMKIQDLVCY
WDKMQEAPTLQNVSFTVRPDQLLAVIGPVGSGKRHPGRDESAKRCRQNPRRRDLHFPAAL
DSTRHRPKQHPFRQRAQPLQVRPSAESLRPEESENYSGSPVKDMELLPGGDLASVGDRGA
NLSGGQKARVSLARAVYRDADIYLLDDPLSAVDAEVGKHIFEECICGLLRDKPRVLVTHQ
LQYLKAAHEIVVLKEGQMVAKGSYRELQNSGVDFTSLLKEEDSQEERPGTTLTLSDKSMS
SMSSLSASCYSLMDETCTAAAQPTEEERRTQGAIGLQIYVKYFRAGANFLVLFLLMLLNV
LAHVAFVLQDWWLAHWASEQQHVNVTQFHNGSFPVPLDLDLYLSVYAGLTGAAVLFGFVR
NLVFFNVLVNSAQTLHNRMFGTILRTPVHFFQNNPIGRILNRFSKDMGFLDSMLPCTFVD
FTQVFLQVLGVVIVSAIVMPWILYLFVPLFVVFLCLRHYYLQTSRDIKRLEATTRSPVFS
HLSTSLQGLSTIRAFKVQWRFQEMFDDCQDLHSEAWFLFLTTSRWLAVRLDGICSIFISV
TTFGCIYFNDDMDPGKIGLALSYAVTLIGMFQWGVRQSAEIENMMTSVERVVEYAELKSE
APWETDTKPPPDWPKRGSITFDSVNFSYSASEPLVLKDLTVVFKSKEKVGIVGRTGAGKS
SLISALFRLAEPEGKITIDGFRTSDIGLHTLRQKISIIPQDPVLFTGTMRKNLDPLSQHT
DEDLWNALREVQMKAAVEELPSKMETLLTESGSNFSMGQRQLLCLARAILRKNRILVIDE
ATANVDPRTDSLIQQTIRGKFQECTVLTIAHRLNTIIDCDRILVLDASKIHEYDEPYVLL
QNHQGLFYQMVQQTGQAEAASLLHVAKQVYENKKREARHLQDVVFETSL
NT seq 3930 nt   +upstreamnt  +downstreamnt
atggaagctctgcgtcaagacgtgaaggataatccgttttcaaaggctaatcttttctcc
aagcttttcttctgttggttgaatcccttgttcaaaactggctacaagaggaggctagaa
caagatgacatgtacaaagttcttcctgaggatgcgtcagacagacttggggaggagtta
cagtggtactgggatcaagaagttaagctagcgacaaaagctcaacgacagcctgaactc
accagagtcatcgtcaagtgttactggaaatccaacgctcgtattggagtgtacctcgtc
atacaggaagtcattaaagtcattcagccggtgttactcggtaagctcatcgagtacttt
gagagtcccgataccacgggcccaactgccatccacaaggcctactggtacgcagcgggc
gtctgtctgtccaccatctccatggccatcctccaccatctctatttctatcatgtccaa
agagcgggcatgaaaatccgtgtggccatgtgtcacatgatctaccgtaaggctctcagt
cttaacaacatggcgctgactaaaacgacaacaggacagattgtcaatctgctttccaat
gacgtcaacaaatttgatgaggtaacactttatctgcactttctatggatcgcccccctg
gaggcagcattggtgatcatcttattgatgtattggatcggtccatcatgcctcgcgggg
atggccgtctttttcgtccttataccagtgcaggctatgtttggaagagtgttttccagg
ctgagggctgacacggcaatcctgactgatgataggatacgcacaatgaacgaggttatc
gctgggatccgtgtgataaagatgtacgggtgggaggaagccttcgccgcgctcgtggat
gaagtccgaagaatggagatctccaaaataatgaagagcagctacttacgtggtttgaac
atggcgtcgttcttcatggccagcaagctcatcatcttcctcaccgtttgcgtctacgtg
ctgacgggcaaccggctgtcttcaagcattgccttcatggccgtttccctctacagcgcc
gtcagactcaccatcacgctcttctttcccttcgccatcgagaaggtctcggaggccctc
atcagcattcaaagaattcaaaattttctccacctggatgaagttgctcctcagcatctg
gaactcccggcggaagagaagaaagactgtatgatgaagattcaggatttggtgtgctat
tgggacaagatgcaagaagctccaactttacagaatgtgtccttcacagtgagacctgat
cagctgcttgctgtgatcggtcccgttggctccggaaagcgccatcctgggagagatgag
tcagcaaagcggtgccgtcaaaatccgaggagacgtgacctacacttcccagcagccttg
gattctacccggcaccgtccgaagcaacatccttttcggcaaagagctcaaccgcttcaa
gtacgaccgagtgctgaaagcctgcgccctgaagagagtgagaattattccggttccccc
gtgaaggacatggagttgctgccaggtggcgacttggcatccgtcggagacagaggagcc
aacttgagtggaggacagaaggcgagagtcagcttggccagagcagtgtaccgggatgct
gacatctacctcctggacgaccccctcagcgctgtggacgctgaagtcggcaagcacatc
tttgaagagtgcatttgtggactcctcagggacaagccacgtgttctcgtcactcatcag
ttgcaatatctgaaggccgcccatgaaattgtagtcttgaaggagggtcaaatggtggcc
aaggggagctacagagagttgcaaaactctggagttgacttcacctcactcctcaaggag
gaggacagccaggaggaaagacccggcacaaccttgactctctctgacaagtccatgtcc
tccatgtcctccttgtccgcctcctgctactcgctgatggacgagacatgcacggcggca
gcgcagcccacggaggaggaaaggcgcacgcagggagccatcggcctgcaaatatatgtg
aaatatttcagagcaggcgcgaacttcctggttctcttcctcctcatgctccttaacgtt
ctcgcacacgtggcgtttgtgctgcaggactggtggcttgctcattgggcctccgagcag
cagcacgtcaacgtaacgcagttccacaatggaagcttccccgtaccgctggaccttgac
ctctacctaagtgtttacgcaggtttaacaggtgcggctgtgctgttcggcttcgttcgc
aacttggtcttcttcaatgtcctggtgaactcggcccagacccttcacaaccgaatgttt
ggtaccatcctgcggacgccggtgcactttttccaaaacaatccaattggaagaatcctc
aacaggttttccaaagacatgggcttcctagactcgatgctgccatgcacgtttgtggac
ttcacccaggtgttcctgcaagtgcttggtgtggtcatagtgtccgccatcgtcatgcct
tggatactctacctgtttgttcctcttttcgtcgtcttcctgtgtttgcgacactactac
cttcagacctccagggacatcaagcgcttggaggcgaccacaaggagtcccgttttctcc
cacctctcgacttccttgcaaggtctgagcaccatccgagcgtttaaagttcagtggcgg
tttcaggagatgtttgatgactgtcaagatctccactcagaggcctggttcttgttcctg
actacgtctcgctggcttgccgtgcgcctcgacgggatttgctctattttcatcagcgtt
acgacattcggctgcatttatttcaatgacgatatggaccccggtaaaattggtctggct
ctgtcatacgccgtgacactgattggcatgttccagtggggcgtcagacaaagcgcggag
atcgagaatatgatgacatcggtggagagggtggtagagtacgccgagctgaagagcgaa
gcaccttgggagacggacacaaagccgccgcctgattggccgaagagaggctccatcaca
tttgactcagtcaacttctcctacagtgccagtgagcctttagtgctcaaggacttgact
gtggtcttcaaatccaaagaaaaggtgggcattgtgggccgcaccggcgccggtaagagc
tctctgatctcggccttgttccggctggcagaacccgagggcaagatcacgatcgatggc
tttcgcacgtccgacatcggtctgcacaccctccgccagaagatatccatcatcccgcag
gacccggttctcttcacgggcaccatgaggaagaatctggaccctttgagccagcacaca
gatgaggacctgtggaatgcactccgagaggtgcagatgaaggcggcggtggaggaactg
cccagtaagatggagacgctgctgactgagtcgggctctaacttcagcatgggccagagg
cagctgctgtgtttggccagagccatcctgcgcaaaaaccgcatccttgtcatcgacgag
gccacggccaatgtggacccgagaaccgacagcctgatccagcagacaatccggggcaag
tttcaagagtgtaccgtgctcaccatcgctcacaggctcaacaccatcattgactgtgac
agaatactggtcctggatgccagcaaaattcacgaatatgatgaaccttacgtgctgctc
cagaaccaccaagggcttttctatcaaatggtccagcagacaggacaagctgaggcggcc
tcactgctgcacgtggccaaacaggtgtacgagaacaaaaagcgagaggcgcgccacctc
caggacgtcgtctttgagacgtcgctctga

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