Syngnathus scovelli (Gulf pipefish): 125973962
Help
Entry
125973962 CDS
T08785
Symbol
gpc6b
Name
(RefSeq) glypican-6b isoform X1
KO
K08112
glypican 6
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sscv00535
]
125973962 (gpc6b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
125973962 (gpc6b)
Proteoglycans [BR:
sscv00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
125973962 (gpc6b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
sscv00537
]
Others
125973962 (gpc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
Motif
Other DBs
NCBI-GeneID:
125973962
NCBI-ProteinID:
XP_049584656
LinkDB
All DBs
Position
8:complement(11697189..11751180)
Genome browser
AA seq
563 aa
AA seq
DB search
MLRLEMLVYTFSALCIASKAELKARNCTEVREACVARGFNFTHVPLQEIPGENLRVCPHS
NTCCTQEMEDAFGQRIKQEFSDLVDEMSHTLRSMFVSRHQKFDEFFLELLENTERSLNEM
FVRTYGKPYMQNAEVFENLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTLLNSQYVIT
EDYLECVSKYTDQLKPFGDVPRKLKAQITRAFIAARTFVQGLSVGREVAQRVSKVSSTPA
CMRALTKMSYCPFCQGMPAIKPCKNYCLNVIKGCLANQADLDPEWNHYIDAMLLVALRLE
GPFNIESVMDPIDVKISEAIMNMQDNSAQVSYKAFQGCGQPKPAGMTRSARGVADVFNAR
FRPYNPDERPTTAAGTSLDRLRIIWNTMQHSVVDIKEKLKQSKRFWSNLPEEMCVDTRLA
VGNASDDQCWNGHTKGRYFPEVVTDGLTNQVNNPEVNVDITRPDTFIRQQIMALRVMTNK
LKNAYNGNDIYFQDSSDEGSGSGSGSGCTEACPTEADVAPPEAPGVEADRRGPVDGTCSS
HAPPSSLLTIVALLAVLLQIHWR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgctcagactggagatgctcgtttacactttttctgcgctgtgcatcgcatccaaagca
gaattgaaagcaaggaattgcaccgaggtgagggaagcttgtgtagccaggggcttcaac
ttcacgcatgttcccctccaggagattccaggtgaaaatctgcgagtgtgtccgcattcg
aacacatgttgtacccaagaaatggaagacgcctttggccagcggattaagcaagagttt
agtgatctggtggatgagatgagtcacaccttgaggagcatgtttgtgtctcgacatcag
aagtttgatgaattcttcttggagctcctggagaacactgagaggtccttgaacgagatg
ttcgtgcgaacgtacggcaagccttacatgcagaacgccgaggtgttcgagaacctcttc
gccgagctcaagcgttattacactgggggcaatgtcaacctggaggaaatgctcaacgac
ttttggtcgcggcttctggagcgtatgttcactctgctgaactcccagtatgtcatcact
gaagactacctggagtgcgtcagcaagtacacagatcagctcaagccctttggagacgtg
cccaggaaactgaaggctcagatcacccgggcgttcatcgctgctcgcacttttgtccaa
ggactctcggtcggccgcgaggtggctcagagagtctctaaggtaagcagcactccggca
tgcatgcgagcgctgaccaagatgtcgtactgccccttttgtcaaggcatgccagccatt
aaaccctgcaagaactactgcctcaatgtcatcaaaggctgcctggccaatcaagccgac
ctggaccccgagtggaaccattacatcgatgctatgctgctagtggctctgcggctggag
ggacctttcaacatcgaatccgtcatggaccccattgatgtcaagatctcagaagccatc
atgaatatgcaagacaacagcgcccaggtctcctataaggcttttcaaggttgcggtcag
ccaaaacccgcaggaatgacacggtctgcccgtggcgttgcggatgtgttcaacgcccgc
ttcaggccctacaacccagacgagcgtcccaccacggcagctggcacaagcctcgacaga
ctgaggattatttggaatactatgcaacacagcgttgttgacataaaagagaaactcaag
cagtccaagagattttggtctaatctgcctgaggagatgtgtgtggacaccaggcttgct
gttgggaatgcttctgatgatcagtgctggaatggacacaccaaggggaggtatttccca
gaagtggtaacggatggattaaccaaccaggtaaacaaccccgaggtcaatgtggacatc
acccgtccggacacgttcatccgtcagcagatcatggctctccgagtgatgacaaacaag
ctgaaaaatgcctataatggcaacgatatctactttcaggactcaagcgacgagggcagc
ggttctggcagcggaagcggctgcacagaggcctgccccacagaggcagatgtggcccct
cccgaagccccgggcgtggaagccgaccggaggggtccggtagacggcacttgttcatcc
cacgctcccccctcaagcctcttaaccatagtggccctcttggctgtgctactccaaata
cattggagataa
DBGET
integrated database retrieval system