Syngnathus scovelli (Gulf pipefish): 125974049
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Entry
125974049 CDS
T08785
Name
(RefSeq) TRAF3-interacting protein 1-like isoform X1
KO
K19680
TRAF3-interacting protein 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sscv03037
]
125974049
Cilium and associated proteins [BR:
sscv03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
125974049
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Gene cluster
GFIT
Motif
Pfam:
MIP-T3
MIP-T3_C
DUF4880
PUB_1
Motif
Other DBs
NCBI-GeneID:
125974049
NCBI-ProteinID:
XP_049584793
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Position
8:complement(17652612..17656114)
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AA seq
601 aa
AA seq
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MATTNSQIIKKTQSTLGKVIKKPALTEKLLSKPPFRYLHDIFSEIIRTTGFMKGLYKDNE
LKSECFKDKEMKMAFLQKAIDVVVLVTGEPLAVRPAHIVAGHEPEKTNEFLQTIAKCCLN
KMSSKEAVRRVLAGERLDVRTKESALKSQDKDVAEGRQEKKTTTEQSESRVEEEPEPHGE
PERQRRDGEREHRNAKEHRRREQELAKDAEQEDKSRHKDNAQSNEKDKGQGNKTKEKEKV
KSAESERHKAASRTESPTRTSSAKGQKRKNKFGDESDGEGGGVSKEAPIQCKDAEHGPSP
PNNESGDVAGSSLSPGVASSNSRATPRPSSARPAPPRVKTQESFVEGLPPERLSSAKSSV
IREGKKLSDDEDEEDEQFLVAEAAPESVDALEKDCAQDLSSEAKHGGLVKKILETKKDYE
PSASCNKSKEKLMSEEARRKEEDLVTREVERLRASIQSVCQSALPLGKIMDYVQEDIDAM
QAELQSWRKENKEHAQALLQENKSVHAASGATLATLANACVIPQSDGAGGGTSQGRTGRA
GPADERLPGQDLCRQVQHSDQRGEHPEEVGGHYLFQILKERKTRGPWEYKVLVSPAGQIL
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacaaacagccaaataatcaaaaagacacaaagcacactgggcaaagtgatc
aagaaaccggctctcactgagaaactgctgagcaaaccgccgtttcggtacctgcacgac
atcttctctgagatcatcaggaccactggctttatgaaaggcttgtacaaagacaatgaa
ttgaagtcagaatgtttcaaggacaaggagatgaagatggcgttcctccagaaagccatc
gatgttgtggtgctggtcactggagaaccccttgcggtcagaccggcgcatattgtcgcc
ggtcatgagcccgagaagaccaacgagttcctgcagaccattgccaagtgctgcctcaac
aagatgtccagtaaggaggccgtgaggagagttcttgcaggagagcggttggacgtgagg
accaaggagagcgcgctcaaatcccaagacaaggacgttgccgaggggcgccaggagaag
aagacgacgacggagcagagcgagagcagggtcgaggaggagccggagccgcacggagaa
ccggagagacagcggcgagacggtgagagggaacaccgcaacgccaaggagcacaggcgg
cgggaacaggagctcgcgaaagatgccgagcaggaagacaagagtcgccataaagacaat
gcgcaaagcaacgagaaagacaaaggtcaaggcaacaagacaaaagagaaagaaaaagtc
aaaagcgcagagagcgagcgacacaaagcggcgtcacgcacggagagtccgaccagaaca
agttctgccaaagggcaaaaaaggaaaaacaagtttggagacgaatcggacggtgaaggc
ggcggtgtctctaaagaagcgcccatccaatgcaaagacgccgaacacggtccgagtcct
cctaacaatgaaagcggagatgttgcaggctcctcactttcgcctggcgtggcctccagc
aacagccgagcgacgccgcggcccagcagcgctcggccggctcctcctcgagtcaagaca
caggagagctttgtcgaagggcttccacccgagaggctctccagtgccaagtcgtcagtc
atcagagaagggaagaagttgtctgatgatgaggatgaggaagatgagcagtttctggtg
gcggaggcagcccctgaatctgtagatgctctagagaaggactgtgcacaagacctcagc
agtgaagcaaaacacggaggactggtgaagaagatcctcgaaaccaaaaaagactacgaa
ccctcggcgtcctgcaataaatccaaagagaagctgatgtccgaggaagcccgccggaaa
gaggaggacctggtgacacgggaggtggaacgtctacgtgcttccatccagtcggtgtgt
cagagcgcgctgccgctgggcaagatcatggactacgtgcaggaggacatcgacgccatg
caagccgagctgcaaagctggcgcaaggagaacaaggagcacgcgcaggctctgctgcag
gagaacaagtcggtacatgcggcgagtggcgccactttagcgacgttagcgaatgcgtgt
gtgatcccgcagagtgacggagcaggcggtggaacctctcaaggccgaactgggcgagct
ggaccagcagatgaaagattaccaggacaagatttgtgccgtcaggtccaacattctgac
caacgaggagaacatccagaagaagttggtggccattatctcttccagatcctgaaagaa
agaaaaacgcgggggccttgggagtacaaagttctggtttctccggctggccagattttg
ctttaa
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