Syngnathus scovelli (Gulf pipefish): 125974075
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Entry
125974075 CDS
T08785
Symbol
dbr1
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sscv03041
]
125974075 (dbr1)
03009 Ribosome biogenesis [BR:
sscv03009
]
125974075 (dbr1)
Spliceosome [BR:
sscv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125974075 (dbr1)
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
90S particles
RNase
125974075 (dbr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
125974075
NCBI-ProteinID:
XP_049584870
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All DBs
Position
8:complement(14134394..14138583)
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AA seq
553 aa
AA seq
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MKIAVEGCCHGELDKIYETISYLEKKEGIKVDLLLCCGDFQAVRNEGDLKCMAVPAKYRT
MQTFYKYYSGEKKAPILTIFIGGNHEASNHLQELSYGGWVAPNIYYLGYAGVIRYKGIRI
GGISGIFKSHDYRRGHYEFPPYNPETLRSVYHVRNIEVFKLKQLRMPVDIFLSHDWPRGI
YHHGPLEELLRKKKFFRQEVESNSLGSPAAAELLEHLQPTYWFSAHLHVKFAALKQHPPK
PNAAPRVTKFLSLDKCLPYRQFLQIVDIPDRDGSSDDLEYDPEWLAILKATNDLQRTAPH
PWNPPENNGLHERWDFTVSEDAMMKVVEQLSGELAIPDNFSCTVPPYDPSSPQYHATPSY
HANPQTTELCATLGLTDLYTQAGQSGNRSGSQGGLTSEEVDTQSGDEPSDYPTDISGASN
SFNPDEIIIEDEWEEEAGEEEPKSSTDPKVPQGNFHTPGGMVLPPPKSKVSPSPMSPIMD
LPPPSHSTPAVPRLAPINLESNDEPNLESNDERFLKRTSDKVGDVESQTTTTPRIKRRNQ
SIYASVEDDECDE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagcagtggagggctgttgccatggtgagctggacaagatctatgagaccatc
agctacctggagaagaaggaaggcatcaaagtggacttgctgctttgctgcggcgacttc
caggctgtgcgcaacgaaggcgacctcaagtgcatggcggtgcctgccaagtaccgaacc
atgcaaaccttttataagtactactctggagaaaagaaggctcccattcttactatcttc
attggtggtaaccacgaggcctccaatcatctgcaggagctttcttatggaggctgggta
gctcctaatatatattatttgggttacgctggggtcattcgatacaaagggatccgaatt
ggcggcatttctggaatttttaagtcacatgactacagaagaggtcactacgagttccca
ccatacaaccccgaaaccctgagaagcgtctatcatgtgcgaaatattgaggtgtttaaa
ctcaagcagcttcgcatgcccgttgacattttcctgagccacgactggcctcgcggtatc
tatcatcacggccccttggaggagctcctccggaagaagaagttttttcggcaagaagta
gagtccaattctcttggaagtcccgcagccgccgagctcctggagcacctccagcctacc
tactggttctcggcgcatcttcacgtcaaatttgctgctctcaagcagcatccccctaaa
cctaacgctgccccgcgggtcaccaaattcctgtcgctggataaatgtctaccctatcga
caattcttgcagatcgtggacataccggatagagacggttcatccgatgatctggaatac
gaccccgaatggctcgccatcttgaaggccaccaacgatttgcagaggaccgcccctcat
ccctggaacccgccggagaataacggcttacatgaacggtgggactttacggtttctgag
gatgcgatgatgaaggtggtggagcagctcagtggcgaactcgccatcccggacaacttc
agttgcacagtgccgccttacgacccaagcagcccccagtaccacgccacccccagctac
cacgccaaccctcagaccacagagctgtgtgccaccttgggcctcacagatctctacacc
caagcgggccagtctggcaacaggagcgggtctcagggcggcctcacctctgaggaagtt
gacactcagagcggcgatgagcccagcgactacccaactgacatttcgggcgcatcgaat
tccttcaatcccgatgagattatcatagaggatgagtgggaggaggaagcgggtgaggaa
gagcccaaaagcagcactgatccaaaagtgccccagggcaacttccacacaccgggcggc
atggtcttgcccccgcccaagtctaaagtgtcgcccagtcccatgtcccccattatggac
ctgcctcccccttcccactctacaccagccgtcccacgtcttgctccaatcaacttggag
tcaaacgatgagcccaacttggagtcaaacgatgagcgcttcctcaaacggaccagcgac
aaagtaggtgacgtggaaagccagaccactaccacaccgcggatcaaacgcaggaaccaa
tcaatctatgccagcgtggaggatgatgagtgtgatgaatag
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