KEGG   Syngnathus scovelli (Gulf pipefish): 125974077
Entry
125974077         CDS       T08785                                 
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04137  Mitophagy - animal
sscv04144  Endocytosis
sscv04145  Phagosome
sscv04148  Efferocytosis
sscv05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    125974077 (rab5b)
   04145 Phagosome
    125974077 (rab5b)
   04137 Mitophagy - animal
    125974077 (rab5b)
   04148 Efferocytosis
    125974077 (rab5b)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    125974077 (rab5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sscv04131]
    125974077 (rab5b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sscv04147]
    125974077 (rab5b)
   04031 GTP-binding proteins [BR:sscv04031]
    125974077 (rab5b)
Membrane trafficking [BR:sscv04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    125974077 (rab5b)
 Endosome - Lysosome transport
    125974077 (rab5b)
Exosome [BR:sscv04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125974077 (rab5b)
  Exosomal proteins of other body fluids (saliva and urine)
   125974077 (rab5b)
  Exosomal proteins of colorectal cancer cells
   125974077 (rab5b)
  Exosomal proteins of melanoma cells
   125974077 (rab5b)
GTP-binding proteins [BR:sscv04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    125974077 (rab5b)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase SDR-like AAA_16
Other DBs
NCBI-GeneID: 125974077
NCBI-ProteinID: XP_049584876
LinkDB
Position
8:14130756..14133760
AA seq 216 aa
MSSRGSGGRSNGALQQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAEKRLVEYEEAQTYADDTSLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq 651 nt   +upstreamnt  +downstreamnt
atgagctcccgagggagtggcggccgctccaatggcgcgctgcagcaaaccaagatctgc
cagttcaagttggtgctgctgggtgacatggcagtaggcaagtccagtctggtgctacgc
ttcgtcaagggacagtttgacgagtttcaggagactaccataggagctgccttcctggct
cagtcagtgtgtttagatgacaccactgtcaagtttgagatctgggacacagcaggacag
gagcgttaccacagcctggcacccatgtactaccgaggcgctcaggctgccatcgtagtt
tttgacatcaccaagccggaaacttttgagagggccaaggcctgggtgaaggagctgcag
aggcaggccagtcccaacattgtcattgctttggcgggcaacaaggcagacttggctgag
aagagactagtagagtatgaggaagcgcagacgtacgccgatgacacgagcctgctcttc
atggaaacttcggccaagacggccatgaacgtcaacgagcttttcctggccatcgccaaa
aagatgccaaaaacagacacccaaaacccaacacacgcagcgcgacatcgaggggtcaac
cttcaggaccctgacgcccactccaccagagcttgctgcggcgggaactag

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