Syngnathus scovelli (Gulf pipefish): 125974093
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Entry
125974093 CDS
T08785
Symbol
hecw2a
Name
(RefSeq) E3 ubiquitin-protein ligase HECW2
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125974093 (hecw2a)
Enzymes [BR:
sscv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
125974093 (hecw2a)
Ubiquitin system [BR:
sscv04121
]
Ubiquitin ligases (E3)
HECT type E3
125974093 (hecw2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
Motif
Other DBs
NCBI-GeneID:
125974093
NCBI-ProteinID:
XP_049584905
LinkDB
All DBs
Position
8:18473160..18485600
Genome browser
AA seq
1521 aa
AA seq
DB search
MRPSLATAVLPARTRTHNAVPNLAVGGREHLSAPRRRSPNLRHTLSPENLRSLAERGGAS
LDAVSVVSGPVGLPRANSDTDLVSSQTRSSLTASTLDFTLNRGQTLVISWDIKEEVDATD
WIGLYHIDETSPSNVWDCKNRGVNGTQKGQIVWRLEAGPYFMEPETRICFKYYHGVSGAL
RATTPCITVKNTAVLVEGLAEQVGVEHPRKLISFTLTDLRASGLKKGMFFHPDPYLKMSI
HPGKRSVFPVFSHHGQERRSAIIANTVNPTWHGEKYTFVALMTDILYIEVKDKFAKSRPI
IKRFLGQLTIPVQRLIEKIPGVQPVTFPLCRRLPTEHVSGQLQFKVELTSTGPDGASPDS
IIGLSTFNGAPGTPSDDEDLPHHLPGVLSVGSSPIGSQSPRGIWEAEAAAAAAYPEKELL
LVRAGGARFLEGHGELLQRSFSEGLDAIEAPKGPGERPLGAASPKLRSSFPTHTRLSAML
HIDSDEDDERSAFGELPPMSSPLLLNGDPPDTSGPDEDVPSPELRPVLEPSADDEPERAG
APEAEQDDLLEAEVFSEAEEAPFAESACRQALPEDGEALEVGGGPGEEPSSEVDTCSMAT
ARQTVASSSDSCPVTLTTAVEAEKGADAAIDPGGGVMDADPPPQPPPPRGPPVHREDCPE
ARGEAAASARASEEIGERKMSLQAAGGVAQEAGGVAQEAGGVAQEADGDQPKPHDETGSA
KSEQVGGETDGEEGTPVNGHPVRSLPSVRHDIHRYQRVDEPLPPNWEARIDSHGRIFFVD
HVNRTTTWQRPTGPPAPQGLTRSNSIQQMEQLNRRYQSIRRTITNSDRPEESPAELLPEP
EPEAELIPHSISEYRRDSLVGHSSGRSRLSLLLQSPSAKFLCSPDFFTVLHSNPSAYRMF
TSNTCLKHMISKVRRDAHYFERYQHNRDLVTFLNMFSNKQLELPRGWEMKHDHTGKPFFV
DHNCRSTTFIDPRLPLQSSRSTGLLAHRQHLSRQRSHSAGEVGDDSRQSNPSAAPRPSNT
FGGSSRSGQYHEPVPVAYNDKIVAFLRQPNVFEVLQERQPELARNNSLKEKVQFIRSEGA
VGLARLSGDADLVMLLSLFEEEVMSYVPPLLHPNYSLSSSPQSSPGTQRANARAPAPYKR
DFEAKLRNFYRKLETKGYGQGPGKVKLIIRRDHLLEDAFNQIMCYSRKDLQRSKLYVSFV
GEDGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNHHEWFRFSG
RILGLALVHQYLLDAFFTRPFYKGLLRIPCDLSDLEFLDEEFHQSLQWMKDNDIEDMLDL
TFTVNEEVFGQITERELKPGGAGIPVSEKNKKEYIERMVKWRIERGVAQQTESLVRGFYE
VVDVRLVSVFDARELELVIAGTAEIDLADWRNNTEYRGGYHDNHIVIRWFWAAVERFNNE
QRLRLLQFVTGTSSIPYEGFASLRGSNGPRRFCVEKWGKITSLPRAHTCFNRLDLPPYPS
FSMLYEKLVTAVEETSTFGLE
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccgtccctcgccacggccgtcctcccggccaggacccgcacgcacaacgccgta
cccaatttggccgtggggggccgcgagcacctctcggccccgcggcggcgcagccccaac
cttcggcacaccctcagcccggagaacctccgcagcctggcggagaggggcggggcctcg
ctggacgccgtgtccgtggtgagcgggcccgtgggcctcccccgcgccaacagcgacacc
gacctggtgagctcgcagaccaggtcctcgctgaccgcgtccaccctggactttacgctg
aaccggggccagaccctggtcatatcctgggacatcaaggaggaagtggacgccaccgac
tggatcggactctaccatatcgatgagaccagtccgtcaaacgtgtgggattgtaagaac
cgaggggtgaacggtacccagaaggggcagatcgtttggaggctggaggccgggccctac
ttcatggaaccggagaccaggatctgcttcaagtactaccacggagtgagcggagctctg
agagcaaccaccccctgcatcactgtgaagaatacggccgtcctggtggagggtctggcc
gagcaggtgggcgtggagcatcctcggaaattgataagcttcaccttgacagatctgcgt
gccagcggcctgaagaaaggcatgttcttccatcccgatccgtacctcaagatgtccatc
cacccgggcaagaggagcgtctttcccgtcttcagccaccacgggcaggaacgtcgctcg
gccatcatcgccaacaccgtcaaccccacttggcacggagagaaatatacatttgtcgcc
ctgatgacagacatcctgtacattgaggtgaaggacaagtttgctaaaagtcggcccatc
atcaagcgtttcctgggtcagctgaccatccccgtgcagcggctcattgagaaaataccc
ggagtccagcccgtcacgtttcccctgtgccgccgcctgcccacggagcacgtcagcgga
cagctgcagtttaaggttgaactcacgtccaccggacctgacggtgcctctccggattcc
atcattggcctttccaccttcaacggagctccggggacgccttcggacgacgaggacctg
cctcatcaccttccgggagtgctttcggtaggaagctcccccatcggatcgcagagtcct
cgaggtatctgggaagccgaggcggcggcggcggcggcctacccggaaaaggagctgctg
ctcgtccgagccggcggggccaggtttttggagggccacggcgagttgctccagaggtct
ttcagcgagggtctggatgctatcgaggcccccaaggggcccggcgaaaggcccttgggc
gcagcctcgcccaaattgcgctccagcttccccacgcacacgcggctcagcgccatgttg
cacattgactcggacgaggatgacgagcgctccgctttcggagaactgcctcccatgtcg
tccccgctgctacttaacggggatcctccggataccagcggtccggatgaagacgtgccg
tctcctgagctgcgaccggtcctcgagccgtccgcagacgacgaaccggagcgtgccggc
gctccggaggcggaacaagatgaccttctggaggcggaggtattctccgaggcggaggaa
gcgccgttcgcagagagcgcctgccgccaagctttgccggaggacggggaggccctggag
gtgggagggggacccggcgaggagccttcttccgaggtggacacgtgctccatggccaca
gcccggcagacggtggcgtcgtcgtcagatagttgtccggtcaccttgaccacagctgtg
gaagcagagaaaggggccgatgcagccatcgatccagggggaggtgtgatggacgccgac
cccccgccgcagccgccgccacctcgcggtccgcctgtccaccgtgaagattgtcccgag
gcccgaggagaagcagcagcttcagctcgggcgtccgaggagataggcgagagaaagatg
agtctgcaggcagcgggcggcgtggcccaagaggcgggcggcgtggcccaagaggcgggc
ggcgtggcccaagaggcggacggcgaccagcccaagccgcacgacgagacgggctctgcc
aagtctgagcaagttggcggcgagacagacggagaggaagggacgcccgtcaacggccat
ccggtgcgctcgcttccgtccgtacggcacgatattcaccgttaccagcgagtggacgag
cctctgccgccgaactgggaggcccggatcgacagtcacggcaggattttttttgtggac
cacgtgaacaggaccacaacgtggcagaggcccaccggaccccccgcgccgcagggtctg
acccgctccaactccattcagcagatggagcaactcaatcgcagataccagagcattcga
agaaccataaccaacagcgatagaccggaggaaagccctgctgagctgctcccggaacca
gaaccagaagctgagctcattcctcactccatttccgaatacagacgagacagtctggtg
ggtcactccagcggtcgttcccgactgtcgttgctgctccagtcgcccagcgccaagttc
ctgtgcagtcccgacttctttactgtgctgcattctaaccctagtgcctaccgcatgttt
acgagcaacacctgcctgaagcacatgatcagcaaggtgcggcgagacgctcactacttt
gagcgctaccagcacaaccgagacctggtcaccttcctcaacatgttctccaacaagcag
ctggagcttccccgcggatgggaaatgaagcacgaccacaccggcaagcccttctttgtg
gatcacaactgtcgctccacaaccttcatcgacccgcggcttcctctccagagctctcgc
tccaccgggctgcttgcccaccgccagcacctgagccgccaacgcagccacagcgccggc
gaggtgggcgacgactcacggcaaagcaacccgtccgccgcgccgcgaccttccaacacc
ttcggcgggtccagtcgctccggccagtaccacgagccggtgcccgtcgcgtacaacgac
aagatcgtagccttcctgaggcagcccaacgtctttgaggtgctgcaggaaagacaaccg
gagcttgccaggaacaactccctcaaggaaaaggtgcagttcatccgcagcgagggcgcc
gtcgggctggcgcgtctgtccggggacgccgacctggtcatgctgctcagtttatttgaa
gaggaggtgatgtcctacgtgccgcctttgctccacccaaattacagcctgtcctcgtct
cctcagagttccccgggcacccaacgggccaacgcacgcgctcccgcgccctacaagcga
gattttgaggccaagctgaggaacttctatcggaaactggagaccaagggatacgggcag
ggccccggcaaagtcaagctcatcatacggcgggaccacctcctggaggacgccttcaac
caaatcatgtgttactcccgcaaagacctgcagaggagtaaactctacgtcagcttcgtg
ggcgaggacgggctggactacagcggcccctccagagaattcttcttcctggtgtccaga
gagcttttcaacccttactacggcctgtttgaatactcggccaacgacacgtacacggtc
caaatcagccccatgtcggcctttgtggacaatcaccacgaatggtttcgatttagcggg
cgcattctgggcctggccctggtccatcagtatctgctggatgccttcttcactcgtcca
ttctacaaggggctgctacgcataccgtgcgatctgagtgacctggagttcctggacgag
gagttccaccagagcttgcagtggatgaaggacaacgacatcgaggacatgctggatctc
acgttcactgtcaacgaggaggtctttgggcagatcaccgagcgagagctgaagcccggg
ggggccggcatccccgtgtcggagaagaacaagaaggagtacatcgagcgcatggtcaag
tggcgcatcgagaggggcgtggctcagcagaccgagagcctggtgcgaggcttctacgag
gtggtggacgtgcgactggtgtcggtgtttgacgccagggagctggagctggtcatcgcc
ggcacggccgagatcgacctggcggactggaggaacaacaccgagtacagaggaggttac
catgacaaccacatagtgatccgctggttctgggcagctgtggagaggttcaacaatgag
cagaggctgcgcctactgcagtttgtgacgggcacgtccagcattccttatgagggcttc
gcttcgctacgcggaagtaacggaccccgccggttctgtgtggagaagtgggggaagatc
acctccttacccagagcgcacacttgcttcaatcggctggacctgccgccctacccgtcc
ttctccatgctctacgagaagctggtgacggccgtggaggagaccagcacctttggtttg
gagtga
DBGET
integrated database retrieval system
