KEGG   Syngnathus scovelli (Gulf pipefish): 125974127
Entry
125974127         CDS       T08785                                 
Symbol
rev1
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    125974127 (rev1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sscv03400]
    125974127 (rev1)
DNA repair and recombination proteins [BR:sscv03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    125974127 (rev1)
SSDB
Motif
Pfam: IMS IMS_HHH_1 REV1_C IMS_C BRCT BRCT_2 UBM POLH-Rev1_HhH LIG3_BRCT IMS_HHH PTCB-BRCT HHH_5 DUF7674 Cdd1
Other DBs
NCBI-GeneID: 125974127
NCBI-ProteinID: XP_049584981
LinkDB
Position
8:16484777..16493025
AA seq 1374 aa
MTNYPVCRHDSKRLLKPNKDNKRLVLSWGISEGLTTGQLHMRRQLSMSRDVWTKKKANAS
DDNGWAESGGYMAAKVSKLEEQFKSDAPKEKQRDSSSNIFSGVAIYVNGYTEPSADELRR
LMMLHGGQFHVYYSRSKTTHIIANNLPNNKIQELKGEKVIKPGWITDSIKAGHRLPYLHY
QLYAKHKGPLFPALKQHQTSDSAGPSHSHHSVPKQDSPNSISPSHKHQDFHQKSLSPNPR
LITSAFSHTDPEHSHFSVEPRHRSSSDSHHPLFKSSPLKRPPSGVFSPHTLQPQSADQHE
PQAFCSTHQRSHKEVEIRVLLSTCRNGSLQTSDLTPECINAPSPLTNGHAHLFNGALKSK
DLFTDKHFVSKDLSKCRMVSPEHKDTSLNKLDPYEFPSSPPKQSDLSPVRFEESCLKDAL
DSSQQTSCQVDSSSDKIPHLPTSHPHIPVRLNGSHQNAFSFHPALESNSTDRPHPSTAAS
GSPNEAATAAQLSAQTGGLISEYYAHSRLHQISTWRTGFSEYVNELHNKRRASGGASFPG
KERLRKLVEQRTFGSPDTQTAVKSCILHVDMDCFFVSVGIRHRPDLKGKPVAVTSNRGHM
RVPLRPGANPQLEQQYYQRKHSLAPPGVNGKEFEDVHDDAPQEVHANGVDQALSMAEIAS
CSYAARQAGVKNGMFFGKAKQLCPSLQSVPYDFDAYKEVALTMYETLAGYTHDIEALSCD
EVLLDASALIAELGVDPEDLAEAIRADIKEKTGCCASIGMGSNILLARLSTRKAKPDGQY
FLKSEDVDDFIRDLLVTSLPGVGPVMGRKLAAIGVKSCGDLRNVSLTQLQKKFGPRSGQT
LFRFCRGLDDRPVRYEKERKSVSAEMNYNIRFKKVDEAESFLSSLSMEVERRLQEAGLQG
RRVTLKVMVRKEGAPQETAKYGGHGICDNFAKTVMLAQSTASGQLIAATVIKMFHTMKLP
VQDLRGLGIQVQLLEGSHSAHNNVNGLRTRSIKEMLLGHASTSKDAGDDKDQPPSRAGLP
GTVELPQSPNATVPGTSKEHEACRQTPKHPRTRLDVSIEIPSPSQVDLSVLEALPAELRL
QVEQSWICREGKQQKHYHPAAPQPLSPKSRLVSSTCSPPALNNHPAPPGALLLQIPNQPD
SPGIVLELPNYSQVDPEVFAALPKELQEELKSAYNRATNNQPQTKTLEQKNALLQLKQSV
GAGVGRVKRRYKRKNAVSPAKKGPSPQKKPRLMNSPAKAAPFTKLKEPMNVFKGENGPST
SSSKQDLEESSPKCILRPPPALAGASELPDIKTLLREWVTTMTDPMEEDILQVVKYCTDL
IEDKDLEKLDLIIKYMKRIMQQSLESVWSMAFDFIVDNVQVVVQQTYGSTLKIA
NT seq 4125 nt   +upstreamnt  +downstreamnt
atgaccaactacccggtgtgtcgccatgactctaaaaggttattgaagccgaataaggac
aataaaaggctggttctgtcttggggaatttccgaaggtttgacgactggacagcttcac
atgcggaggcaactcagtatgagtcgagatgtgtggaccaagaagaaagccaatgccagc
gatgacaacggttgggctgagagcggcggctacatggctgccaaggtgtcaaagttggag
gagcagttcaaaagtgatgcccccaaggagaaacagagggacagttcttccaatattttc
tctggggtggccatctatgttaacggctacacagaaccaagtgcagacgagctccgcagg
ttgatgatgctgcacggcgggcagttccacgtttactactcccgctccaagaccacccat
atcattgccaacaatttgccaaacaacaaaattcaggagctgaaaggggaaaaagtcatc
aagcccggctggattaccgacagcataaaagcagggcatcgcctcccttacttgcactac
caactgtatgccaaacacaaagggccgctgtttccggctctaaagcagcatcagacctca
gatagcgctggacccagtcacagtcatcacagtgttcctaagcaagactcacctaactcc
atttccccctctcacaagcaccaagactttcaccagaagagcctctcgcccaacccacgt
ctcatcacctcagcattctcgcacaccgaccctgagcacagccactttagtgtcgaaccc
agacaccgcagcagttccgattcccaccacccgctatttaaatcaagccccttaaagcgc
ccaccgtcgggagtgttctcacctcataccctccagccacagagtgcagaccaacatgaa
cctcaagctttctgcagtacgcatcagaggagtcacaaggaagtggaaataagagttttg
ttatcaacttgcaggaatggatccttgcagacctcagacctgacacccgagtgcatcaac
gccccctcgcccctcaccaatggccatgctcatctttttaacggtgccttaaaatcaaag
gacctttttacagacaaacattttgtttccaaggacctgagtaaatgcagaatggtgagc
cccgaacataaagacacttccttgaacaaactagacccctacgagttccccagcagtcct
ccgaaacagtccgacctgtcgcccgttcgttttgaggaatcgtgtctgaaagatgcgctc
gattcgtcgcaacagacttcctgtcaagttgactcaagttctgacaaaattcctcatttg
ccaacatctcatccacacattcccgtgcgtctgaacggaagtcaccagaatgccttctca
ttccaccctgccttggaaagcaactcaaccgaccgacctcatcccagcacggcggcgtcc
ggatctcccaacgaggcggcgaccgcggctcagctgtcggcgcagacgggcggcctgatc
tcagagtattacgctcactcgcgtttacaccagatctccacatggaggacgggcttctcc
gagtacgtcaacgaactgcacaacaagcggagggcgtcgggcggagcctcctttccgggc
aaagagcgacttcggaaattggtggagcaacgtacttttggaagcccagatacacagaca
gcagttaaatcttgcatcctccacgtggacatggattgtttctttgtgtctgttgggatc
cgacatcgacctgatctcaagggtaaacccgtagctgtgactagtaaccgtgggcatatg
cgagttcctttaagaccaggggccaacccacagctggagcagcagtactaccagaggaaa
cactctctggctccacctggtgtgaacgggaaagagtttgaagatgtacatgatgatgct
cctcaagaggtccatgctaacggagtggaccaggctctttctatggcggagattgcttcc
tgtagctatgctgcaaggcaggcaggtgtgaagaacgggatgtttttcggaaaagccaaa
cagctgtgccccagcctgcagtccgtcccgtacgactttgacgcctataaagaggtggcc
ctcaccatgtacgagactttggccggttacacccatgacatcgaagctctaagctgtgac
gaagtcctactggacgcctcagctctcatcgccgagttgggggtcgacccagaggatctg
gctgaagccatcagagcagacatcaaggagaaaacgggatgctgcgcttcaattggcatg
gggtccaatatcttgttggctaggctttcgacacgcaaagccaagcccgatgggcagtat
ttcttaaagtcagaagatgtggatgattttatccgggacctgctagtgaccagtttacca
ggtgtagggcctgttatgggcagaaagctggcagctattggggtcaagtcatgcggagac
ctccggaacgtttctctgactcagctgcagaagaagtttggacctcgatcgggacagacg
ctgttccgtttctgcaggggtctcgatgatcgacccgtccgctacgagaaggagaggaag
tccgtgtcggcagagatgaactacaatatacgttttaaaaaggttgatgaggcggagtcg
ttcctatccagcctgtccatggaggtggagcgacgcctacaagaagccgggctgcaaggt
cgcagagtgacgctcaaagtcatggtccgcaaagagggcgcaccccaggagacggcgaaa
tacggcggccatggcatctgcgacaactttgccaagacagtgatgctagcacagtccacg
gccagtggccagctgattgccgctacggtcatcaagatgttccacactatgaagttgcca
gtgcaggacctccgaggcctcggcatccaggtccaacttcttgagggaagtcactctgct
cacaacaatgtcaacgggcttcggacacggtccatcaaagaaatgttgctcggccatgca
tccaccagcaaagatgctggtgacgacaaagatcagcccccttcccgagctggattacct
ggaaccgttgagcttcctcagtctcccaatgcaacagttccaggaactagcaaggaacat
gaagcatgcagacaaacgcccaaacaccccagaacgcgtctcgacgtcagtatcgaaatc
ccctcaccttcacaggtggatctatccgtgttggaagccctgcccgcagagctaagatta
caagtggaacagtcgtggatttgcagagaaggcaaacaacaaaaacactaccatcctgcc
gctccacaacctttgagtcccaagtcacggctggtctcctccacttgttctcctcctgca
ctgaacaaccaccctgcacctcctggagcgcttctactgcagattccaaaccagccggat
agtcctggaattgttttggagctgcctaactactcccaggttgacccagaagttttcgcc
gctctccccaaagagctccaggaggaacttaagtctgcctacaaccgagctactaataac
cagcctcagacaaaaacattggagcagaagaatgcacttttgcagctgaagcagtctgta
ggagccggcgtcggacgagtgaagcggcgatacaagaggaagaacgcagtaagccctgcc
aaaaagggcccatcgcctcaaaagaagccccgcctcatgaacagccctgccaaagcagca
ccttttacgaaactaaaggagcctatgaatgtattcaagggtgaaaatggtccatccaca
tcctcctcaaagcaggacctcgaagagtcttcgccaaaatgcatccttcgccctcctcca
gcattggccggagcttctgagctacccgatattaaaacactcttacgggaatgggtgacc
accatgacagaccccatggaggaggacattctgcaggtggtgaaatattgcactgatcta
atcgaagacaaggatctggagaagctggatctgatcataaaatacatgaagaggatcatg
cagcagtcgctggagtctgtgtggagtatggcctttgacttcatcgtggacaacgtgcag
gtggttgtgcagcaaacctacggtagcaccctgaagattgcatga

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