Syngnathus scovelli (Gulf pipefish): 125974232
Help
Entry
125974232 CDS
T08785
Symbol
usp9
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 9X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sscv01002
]
125974232 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sscv04121
]
125974232 (usp9)
Enzymes [BR:
sscv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125974232 (usp9)
Peptidases and inhibitors [BR:
sscv01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125974232 (usp9)
Ubiquitin system [BR:
sscv04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125974232 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
DinB_2
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
125974232
NCBI-ProteinID:
XP_049585174
LinkDB
All DBs
Position
8:complement(14648681..14676265)
Genome browser
AA seq
2615 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPSEHGQGDGPPQL
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIITNTHRLVELCVAKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSETVPAVAQLADDDLFARPPDPRSPKGWLVDLINKFGTLNGFQMLHDR
FMSGEALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKSLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHNPEEDEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRFVI
KEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASK
KQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSCS
QDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMRINMQMNLVG
QTQRNPHVFYRHDLINQLQNNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQIVRPGSR
YSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAETAVFLCDREACFKWYSKLMGD
EPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLE
LIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASY
DTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHIT
LIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDPADDR
KLIGQLNLKDKTLITAKLTQVSTNMPSSPESSSDSSTGSPGNHGNHYGDGPNPEVESCLP
GVIMSLHTQYISFLWQVADLGCQLNMPLLRDGARVLMKLMPPDNKTVENLRAVCLDHAKL
GENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPLVL
SMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPTAEGNIPVSPI
NQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQTSKSIPDICVIREVQ
KIVWASGCGTVQLVFSSNEDISKIYEKTNAAKEPDEEDEQVCCEALEVMTLCFALMPTAL
DTLSKERAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLGT
TAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETGVE
ETILEGHIGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSGEF
PTEQAIPVCSAPASINAGFELLVALAVGCFRNLKQIVDTLTDMYYLGGETLTEWEYLPPV
GPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRHGILAIEGTGTDVDDDMSGDEKQENE
TNVDPRDEVFSYHHQFDDKPASKAEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWK
QFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGCPH
RYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKL
PPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKIEGDDVNPESQVIQQ
NEPSEPTPVGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTECK
MDDEEEMKNQCFGGEYMGEVFDHMIKRMSYRRQKRWWNAYILFYERMDSLDKDSELVKYI
SELTISTAKPHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPP
GQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRYWF
AHNVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPGTSAQGCD
NLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPATFMLV
ALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSLRMQSSINGNPPLPNPYGDTNLTAPV
MLVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELLWQVAYS
YNYELRPHLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQCI
KCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYSGNPQYTYNNWSPPVQS
NETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDSSPPEDTSL
YPHSPGTTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPPPGPTQAPTPVPAPGPGGP
SPGPRAQENSESTEEIAPGPTPAPASTPAPALPKE
NT seq
7848 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccggtggggggcaatgacagccagggccaggcgcct
gatgctcagagccaacctccgttgccacagaatcagacttcatctcctaactcatctaat
gagaattctccagttagcccacccagcgagcatggacaaggggatggacctccccagctg
gaggaggaggagcccgccttcccccacactgacctagccaagctagatgacatgatcaac
aggcctcgttgggtggttccagttttgccaaaaggagagttagaagtccttttggaggct
gcaatagacctcagtaaaaaaggactggatgtgaagtgtgaggcatgtcagaggtttttc
cgagatggtctgactatctcgtttacaaagattctaacagacgaggcagtcagtggctgg
aagtttgagattcatcggtgtatcatcactaacacacaccgcttggtggagctgtgtgtg
gcaaagctctctcaggactggttcccactactagagcttctggctatggccaccaaccct
cattgcaaattccacatctataatggcacgcggccctctgagaccgtccctgccgtagcg
cagttggccgatgatgaccttttcgccagaccacccgacccacgttcgcctaagggctgg
ttggtggacttaataaataaatttggcacattaaacgggtttcaaatgttgcacgatcgc
ttcatgagcggcgaagcactgaacgtccagatcatcgctgcacttatcaagccttttggc
cagtgttatgagttcctcaccttgcacacagtgaagaaatacttcctccccgtcattgaa
atggtcccccagttcctggagaacctcactgacgaggagcttaagaaagaggccaagaat
gaagccaaaaacgacgcactgtccatgataatcaagtctctaaagagtcttgcatcgcgc
gtaccagggcaagaggagactgtgaagaatttagagatttttaggttaaaaatgattctt
aggttattgcaaatttcttcttttaatggcaaaatgaatgcactaaatgaagtcaacaaa
gtgatctccagtgtgtcctactacactcatcggcacaaccctgaggaggatgaatggctc
actgcagagcgcatggcggagtggatccagcagaaccacatcctttccatcgtcttgagg
gacagtttgcaccagcctcagtacgtcgagaaacttgagaagatccttcgctttgttatc
aaagagaaagctcttaccatgcaggatctcgacaacatctgggcagcacaggctggaaaa
cacgaggctattgtgaaaaatgtccatgacctcctggccaagctagcatgggatttttcc
cctgagcagcttgatcatctatttgactgtttcaaggcaagctggacgaacgccagcaag
aaacagcgcgagaaactgctggagcttatccgccgcctggccgaggatgacaaggacggc
gtgatggcccacaaggtcctcaatctgctgtggaacctggcccacagcgatgatgtgcct
gtagatataatggaccaagctctgagcgctcacatcaaaatattagattacagctgctca
caggaccgagacacccagaagatccagtggatcgatcgcttcattgaggagttgcgaacc
aatgacaaatgggtgattcccgccttgaaacaaatcagagaaatctgtagcctttttgga
gaagctccacagaatttaagaaagaaaatgcgaattaacatgcaaatgaatttagtgggt
caaacccagaggaatccacatgtgttttaccggcatgaccttatcaaccagctgcaaaac
aaccacgctctagttacactcgtggctgagaacctgtcggcctacatggagacaatgcga
caattctccaaagaagaacaggcagagtttgaccctcagatagtccgaccaggaagccgc
tacagccatgtccaggaagtgcaagaacgacttaacttcctgaggttccttcttaaagat
ggccagctgtggctctgtgcccctcaggccaagcagatttggaagtgtctggctgagact
gcagtcttcctctgtgaccgcgaggcctgtttcaaatggtactccaaacttatgggcgat
gaacccgacctggacccagacatcaacaaggacttctttgagaataatgtcctgcaactt
gacccgtccctgttgacggagaatggcatgaagtgcttcgagaggttctttaaggccgtc
aactgcagggagggcaaactggtagccaaacgtagggcctacatgatggacgacctggaa
ctcattggcctagactacctttggagggtggtaattcaaggaagcgatgacattgcgagc
agagccatcgacttgttgaaggagatctacaccaatcttggaccaaaattacaagtcaat
caggtggaaattcatgaagattttatccagtcatgttttgaccgtctgaaggcctcctac
gacaccctgtgtgtgttggatggagataaagatagcataaactgtgcccgccaggaggca
atccgcatggtgcgtgttcttactgtgctcaaggagtacatcaatgaatgtgacagtgat
taccatgaagagaggaccatcctgcccatgtccagagcgttccggggaaaacatatcacg
ttgatcgtgcgcttccctaaccaggggcgccaagtggatgacctggatatctggtcacac
accaatgacacaattggctctgtgcgccgcggcatcctaaatcgcatcaaagcgaacgcc
gcacataccaagatagagctcttcattggaggcgaggtagttgaccctgctgatgacagg
aagcttattggacaactcaacttgaaagacaaaacgctgatcacagccaagctaactcag
gtgagcaccaacatgccctccagcccggagagctcgtccgactcttccaccggctcacca
gggaaccacggcaaccactatggcgatgggcccaatcctgaagtggagagctgtcttccc
ggcgtgatcatgtcgctgcacacgcagtacatctccttcctgtggcaggtggctgacctg
ggctgccaactcaacatgcccctacttagagatggagccagagttctcatgaaactcatg
cctccagataacaaaactgtggagaacctgcgtgctgtgtgtttagaccatgccaagctc
ggagaaaacagcctcagcccttcactggactcccgtttctttggcccctcaccctcacaa
gtgctctacctcattgaggtcgtgtatgctttgctgatgcctgccagcgccactttgggc
gaggatgctagtgactttcagtacaacttcctgaagagcggtggcttgccactggtgttg
agcatgctcacccggaataatttcctgccgtcagccgacatggagacacggcgcggggct
tacctcaatgcactgaaaatcgccaagctcctcctcaccgctgtaggatttggtcatgtg
aaagctgtggcagaggcttgccagcccaccgctgagggaaatatccccgtttccccgatt
aatcaggccactcacgatcaggctctggtgctgcagagtgccctgcaaaacattccaaat
cctgcctcagaatgtatgctgcgcaatgtagccatccgcctggcacagcagatttctgat
gagaatttttttcagacgtcaaagtctattccagacatctgtgtcatcagagaggtacag
aaaatagtgtgggcctcaggctgtggcacggtgcagcttgtctttagttctaacgaagat
atcagcaagatatacgagaagacgaacgcagctaaggagccagacgaagaagatgagcag
gtgtgttgcgaggccttggaagtgatgacattatgttttgccttgatgcccacagccctt
gacaccctcagtaaggagagggcatggcaaaccttcattattgacttgctgctacactgc
cacagcaaatcagtgcgtcagatggcccaggagcagtttttcctcatggcaaccaggtgt
tgcatgggccacagacccctccttttctttattaccctccttttcactgttctggggacc
accgctaaggagcgagctaaacacgccggggactacttcactttgctccggcatctcttg
aactatgcctacaacagcaacatcaacctgccaaatgccgaggtgctgctcaacaatgag
attgactggctcaaaaggataagggacgaagtcaagaggacaggcgagaccggtgtggaa
gagaccatcttggaaggccacattggcgtcaccaaggagcttcttgccttccagactccc
gagaagaagtattacattggttgtgagaaaggaggcgcgaacctcatcaaggagctgatt
gacgacttcatcttcccggcgtcaaacgtttacctgcagtacatgaagagtggcgagttc
cccacggagcaggccattccagtgtgcagcgccccagcctccatcaacgctggctttgag
ctcctggtcgcgcttgctgtcggctgtttccgcaacctcaagcagatcgtcgacacgctc
acggacatgtactatttgggcggtgaaacgttaacagagtgggaatacctgcctcctgtg
ggcccacggccaaataaaggctttgtgggtctgaagaacgctggggccacgtgttacatg
aactctgtaattcagcagctgtacatgattcctcccattcgccacggcatcctggccatc
gagggcacgggaaccgatgtggacgatgacatgtcaggcgatgagaagcaggagaatgag
acgaacgtggatcctcgtgatgaagtgtttagctatcaccaccagtttgacgataagcct
gccagtaaagcagaagaccggaaggagtacaacattggagttttgcgtcacctgcaggtc
atttttggccacctggctgcttccagactgcagtactatgtcccaagaggcttttggaag
caattcaggttatggggtgaacctgtgaatctaagagaacagcatgacgctttagagttt
ttcaattctttggtggatagtttggatgaagcactgaaggccttgggtcatcccgctatg
cttagcaaagtgctaggaggctcttttgccgatcagaagatctgtcagggatgccctcac
agatatgagtgtgaggagtcattcacaacacttaatgtagacatcagaaatcaccagaac
cttttggactcaatggagcagtacgtcaaaggagatctccttgagggagccaacgcatac
cactgtgaaaagtgtaataagaaggtggacacagtcaagcgacttctgatcaagaagctg
ccgccggtccttgctatccaactgaaacgctttgactatgattgggagcgggaatgtgcc
atcaagttcaatgactactttgaatttccgagggagttggacatggagccatacacagta
gcgggcgtggccaagattgagggcgatgacgtcaacccggagagtcaagtgatccagcag
aacgagccctctgaacccactcctgtgggcagctccaagtaccgtttggtgggggtgctg
gtccactcgggccaggccagcggcggacattactactcgtacatcatccaaaggaatgga
ggcgatggtgaaaagaaccgctggtataagttcgatgacggcgacgtgacggaatgcaag
atggatgacgaggaggagatgaagaaccagtgctttggcggcgaatacatgggcgaggtg
ttcgatcacatgatcaaaaggatgtcataccgaagacagaaacggtggtggaatgcctac
atccttttctatgagcgtatggactccctagacaaggacagtgagcttgtcaagtacatc
tccgagttgaccatctccactgcgaagccgcatcaggtcaagatgcctggtgtaatcgag
tgcagcgtccgcaagcagaacgtccaatttatgcacaaccgaatgcaatacagcctggaa
tatttccagttcattaagaaacttctgacctgtaacagtgtctatttaaaccctcctcca
gggcaagaccaccttctgccagaggctgaggagattgctatgatcagtgctcagctggct
gctcggttcctctttagcacaggcttccacaccaagaaagtagtcaggggtcctgccagt
gattggtatgacgccctttgcatcctgctgagacatagtaagaatgtacgctactggttt
gcacacaacgtcctgtttgcctaccccaaccgcttctccgagtacctcctggagtgcccg
agcgctgaggtgcgtggcgccttcgccaagctcatagttttcatcgctcacttctcgctg
caagacggcccctgcccctcccccactgcctcgcccggaacatctgctcagggctgcgat
aacctcagtctaagtgaccacctgttaagagctgtcctcaacttgctcagacgagaggtt
tccgaacacggccgtcacctgcaacagtacttcaacctctttgtcatgtatgccaatctg
ggcttggcagaaaagacccagctgctaaagctgaatgtgcctgccacgttcatgctagta
gcgctggacgaaggccccggcccccccatcaagtaccagtacgctgaactgggcaagctc
tacacggtggtctctcaactggtccgctgctgtgacgtatcattgcgcatgcagtcgtca
atcaatggtaacccccctctgcctaacccctatggggacaccaacctgacagccccggta
atgctggtgcagcagcttgtggctgagatcctgtttgtgaggaccagctatgtgaagaag
atcattgaggactgcagcaactctgaggagacggtgaagcttctccgcttcagctgctgg
gaaaaccctcagttttcttccactgtactcagtgagctactgtggcaggtggcatattcc
tataactatgagttgaggcctcacttggacttgctgctacaaatccttctcattgaggac
tcctggcagactcacaggatccataatgttttgaagggaattccagatgacagggatggt
ctctttgataccatccagcgttccaaaaaccactatcaaaaacgggcataccagtgcatc
aagtgtatggtggccctcttcagtaattgctctgtggcttaccagatcctccagagtaac
ggtgatctgaaacgaaagtggacgtgggctgtagagtggctcggcgacgagctagagagg
cggccatactccggcaacccgcagtacacgtacaacaactggtcacctccggtccagagc
aatgaaacgtccaacggttacttcctggagcgctcgcacagcgcacgcatgacccttgcc
aaggcctgcgaactttgtcctgaggagctcaagtgtactcagggaagcccagggaaggag
ccagatgaacaggaagcccctgacgatcaagactcttcgccgcccgaggacacttctttg
tacccacactctcctggaactacacagtttcagcagaacaaccacccacatgggcagcca
tacactggccccgccgcgcagcacatgaacaaccctcagcgccccggccctgcctcagct
ccacccccgggccccacgcaggctccgactccagttccagccccaggccccggcggcccc
agcccaggcccgagagcacaagagaattcggagagcacggaagagatagcccctggcccg
accccagcccccgcctccaccccggctcccgccctgcctaaggaataa
DBGET
integrated database retrieval system
