Syngnathus scovelli (Gulf pipefish): 125974239
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Entry
125974239 CDS
T08785
Symbol
impg2a
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sscv00536
]
125974239 (impg2a)
Glycosaminoglycan binding proteins [BR:
sscv00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
125974239 (impg2a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SEA
DUF4214
EGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
125974239
NCBI-ProteinID:
XP_049585191
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All DBs
Position
8:15822297..15839403
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AA seq
1057 aa
AA seq
DB search
MSIMRRCLLFSLVLMFLDLRAVTALEGSSMGPLEVALGDKATSFQRVLRVSDIVVSRGSR
VAVSRRKRNILFPSGVRLCAQESAKQVVENHLSFFNLRACQETVWEAFKIFWERLPEQEE
YQSWMNQCQEGVVTARDIGTYFSQSEEHQRVVKKKMSLPGLKSEPTKPGHQTCGTPAPDV
TITTKAPANEEDLAETEDMEEAAAAIVPEIELDNDIPVEPVPAAVLEQVVELSILLTGVM
YNDDLGDQNSLHYQTLSRQLAQKIEDALSGLPGYKSVSVLDFRPHKDLQGLEGIVVDYAV
TLVVDDAGISNNQLDYLTLQSNQVENSYREVKEHPTLVYAISELKTFVTEDLLKGALESE
PESIHTTKETSNEAANVLIMDDVKRDQLLPESAEGDTVETSESDIVVLEESSEISPPVVV
ATASSETASIREEDLLLENTVQTTAADHPVDKYQEEPPPSEKQDTVTLPEPPVVVEASGT
GDLDNLLGPDTTVATEDIEDVVVLEEKHLDNGVDTEDLLVSETAEDNFVPDAVSEELEEV
DSEHPEGPLVEEAGIDEATPSGGQTPEEAPASPPVSLEEPLEASEIASDDIAEDDILLVN
RNVPESSVSVPLSPAQPTAISAEDEITFMSGADVNTAVEGQDDIVMPSPVEIQNGADNDS
PIEDLTFDVLNYGSINQTEEGSTEFPFSISQGTDPASIALPANPGRALMVFFSLRVTNMI
FSEDLFNKSSPEYKALEQRFLELLVPYLQSNLSNFENLEILNFRNGSIVVNSRMKFGKPV
AQGVTTTVYLILEDFCNTAYQTMNLAIDKYSLDVESGDQADPCKFQACNEYAQCKVNKWS
GEAECVCNAGYFSVDGLPCQSICELRSDFCLNDGKCDIIPGQGAICRCRVGENWWYRGEH
CEEYVSEPLVVGIAVASVAGFLLVASGVIFFLARTLRDQYDKDESEDPIRHAESVPSLER
ATKYNPMYESEATTGYSHYYRRYPEAPVYSSASAEASTDFSSEEIRHIYENSELTKEEIQ
DRIRIIELYAKDRQFADFVRQHQAVLDTRRESSSAQT
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcatgcggagatgtcttttatttagtttagtgctcatgtttttggacctgagg
gcagtcaccgctctggaaggatcctccatgggtccacttgaggtggcacttggcgacaaa
gcaacgtctttccagcgtgtccttcgtgtatccgacatcgttgtgtcccgaggaagtcgt
gtggctgtgtccagacgcaaacgcaacatcctctttccgagcggagtcaggctgtgcgcc
caggagagcgccaagcaggttgttgagaaccacctcagtttcttcaatctcagagcgtgc
caggagactgtgtgggaggctttcaaaatcttctgggaacgcctccccgagcaagaggag
taccagagctggatgaaccagtgtcaggaaggggtagtgacggcgcgagatatcggtacc
tacttcagccaatcggaggagcatcagcgggtggtcaaaaagaaaatgtccctgcctggc
ttgaaaagtgaacccactaagcctggacaccagacatgcggcacaccggctcctgatgtg
acaatcaccaccaaggctcctgccaacgaagaagacttagctgagacagaagacatggag
gaagcagcagctgccattgtgccagaaattgagctggacaacgatattcccgtggagcca
gtacctgcggccgtgttggagcaggtggtggagctgagcatcctcctcacaggagtcatg
tacaacgatgacttgggcgaccagaactcgctacactatcagaccctcagcagacagctt
gctcagaagattgaggacgctctgtcgggacttcctggttacaagagcgtgtctgtattg
gacttcaggcctcacaaggatttgcaagggctggaaggcatcgtggtggactacgccgtc
accctggtggtggacgacgcgggcatcagcaacaaccaactggactaccttaccttgcag
tccaaccaggtggagaactcgtaccgcgaggtcaaggagcacccaacgctggtctacgcc
atcagtgagctcaagacctttgtgaccgaggacctcctgaagggcgctctggagagtgag
cccgagtccatccacaccacaaaagaaacctcgaatgaggcagccaatgttctcatcatg
gatgacgtcaagagagaccaattgctgcctgaaagcgcagaaggagacacggtggagaca
tctgaaagcgacattgttgtcctagaggagagctctgagatatctccacccgttgtggtt
gcgaccgcttcgtctgagactgccagcatcagggaagaagatctgcttctggagaacacc
gtgcagaccaccgctgcagatcatcccgtagacaaataccaggaggagccgcccccctcc
gagaaacaagatactgtcacattgcctgaaccaccagtggtggtggaggcctcaggcaca
ggtgacctggacaacctcctggggccggatacaactgtagcgacggaagacattgaagac
gtggttgttctggaagagaagcatctggacaatggtgttgacacagaagaccttcttgtg
agtgaaacagcagaagacaactttgttcctgatgcagtgagtgaggaacttgaggaagtc
gattctgaacatcctgagggacctttagttgaagaagctggcatcgatgaagcaacgccg
agtggagggcaaactcctgaggaagcaccagcctcacctccggtatcccttgaagaaccc
ctagaagcttctgagatcgccagtgacgatatcgcagaagacgacatcttgttggtcaac
aggaatgtacctgaatcatcagttagcgttcctttgagccccgcccaaccgactgcaata
tccgccgaggacgagataactttcatgagtggagctgatgtcaacacagctgtggagggt
caggatgacatcgttatgccttcacccgtggagatccagaacggagctgacaatgattct
cccatcgaagacctcacttttgacgttctcaattatggctcaatcaatcagacagaagaa
ggcagcacggaattccctttcagcatatcacagggcaccgatccagccagcatcgccttg
ccggccaatcccggtcgagcgctcatggtgttcttcagcttgagggtgaccaacatgatc
ttctctgaggatctcttcaacaagagttccccagagtacaaagcattggagcagcgcttc
ctagaactgcttgtgccctacctccagtccaacctgagtaactttgagaacttggagatc
ctaaacttccgcaatggaagcattgtggtgaacagccggatgaaatttggcaagcccgtg
gctcagggtgtcaccaccaccgtttatctgatcctggaggacttctgcaacacagcctac
cagacgatgaacctggccatcgataagtactccctggacgttgaatcaggcgaccaggct
gacccgtgcaagttccaggcatgtaacgagtacgcccagtgcaaggtgaacaagtggtcg
ggcgaggccgagtgcgtgtgcaacgccggctacttcagcgtggatggtttgccttgtcag
agcatctgcgagctacgcagcgacttttgcctcaacgatggcaagtgtgacatcatccct
ggccagggagccatctgcaggtgtcgtgttggagaaaactggtggtacagaggagagcac
tgtgaggagtatgtatcggagcctctggtggttggcattgcggtggcctcagtggctgga
ttccttttggtggcttccggagtgatcttcttcctcgccaggactttacgggatcagtac
gataaggatgagtcggaggacccgatacgacatgctgagagcgttccatcacttgagagg
gcgaccaagtacaaccccatgtacgagagcgaagccaccaccggctacagccactactac
cgccgctaccccgaagctcctgtctacagcagcgccagcgccgaagcttccaccgacttc
agcagcgaggagatccggcacatctacgagaacagcgaactgaccaaggaggaaattcaa
gacaggatacgcatcatcgagctctacgccaaggaccgtcagtttgctgatttcgtgcgg
cagcatcaagctgttctggatacccgaagagaaagttcttctgcacagacatga
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