KEGG   Syngnathus scovelli (Gulf pipefish): 125974571
Entry
125974571         CDS       T08785                                 
Symbol
ell
Name
(RefSeq) RNA polymerase II elongation factor ELL
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
sscv  Syngnathus scovelli (Gulf pipefish)
Pathway
sscv03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sscv00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    125974571 (ell)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:sscv01009]
    125974571 (ell)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sscv03021]
    125974571 (ell)
Protein phosphatases and associated proteins [BR:sscv01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     125974571 (ell)
Transcription machinery [BR:sscv03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     125974571 (ell)
    Little elongation complex (LEC)
     125974571 (ell)
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing Seryl_tRNA_N vATP-synt_E DUF4446 STAT_alpha
Other DBs
NCBI-GeneID: 125974571
NCBI-ProteinID: XP_049585229
LinkDB
Position
10:4763826..4779061
AA seq 628 aa
MAALKEERSYGLSCGRVSNGSNVSVFHVKLTDSALKAFEGYRGGKVRSSQPLITFNGNQG
KISIPRSENSNELHTFTFYLSNVGRDNPQGSFDCIQQYISSEGSIQLDCLGAIQDKITVC
ATDDSYQKARESMAQVEEETRSRGAIVIKPGGRYVGKRVQIRKPASTLSDVAPSRRTSRP
VIISSSAVKKASTQHRPLRERLVHLLALKPYKKPELLLRLQKDGLLQSDKDAMDSHLQQV
ANLNGKDNTLTLKDFLYKEVHKEWPGYTEGDQQLLKRILFRKQCQSRNSAAPPPESPPKE
LASSSPSQKRPAADFIDPLANKKPRISHLASKAAPSPINGKLNSSNGKGEAGGAQPGLAA
HLSDAAPSSGSQPLAMLDIPRPFEALSDVSNDSSHNGKDCDVQETTAERLGQAPTLPSAT
APPPAGAPPAPPPRAESAATGSKKPKKKSKKHKDKEKKDKERARGPEEERKSPHSVPEPD
RTCEMSPENLKSNSIPLKSTTLNGMCNSTSISSSPEVADYLLKYTVITSPEQRQRYKNDF
NSEYTEYRGLHARIESITRHFTELDNELKKLQQGTDKYKTIHNQILQEYHNIKKINPHYS
QEKNRCEYLHNKLAHIKKVIGEYDQQQL
NT seq 1887 nt   +upstreamnt  +downstreamnt
atggcggcgctgaaagaggagcggagctacgggctgtcctgtggaagagtgagcaacggc
agcaatgtctccgtcttccacgtcaaactcactgacagcgcgctgaaggccttcgagggt
taccggggcggcaaggtccggtcatcacaaccattgatcacatttaatggaaaccaaggg
aaaatttcaataccacggtccgagaattccaatgaactgcacacgtttactttctacctg
tccaacgtgggcagagataacccgcagggcagcttcgactgcatccagcagtacatcagc
agcgagggtagcattcagctggactgtttgggcgccatccaagacaagattaccgtatgt
gccacggacgattcttaccagaaggccagagaaagcatggcccaggtcgaggaggagacg
cgcagcaggggcgccattgtcatcaagcccggcggcagatatgtcggcaaaagggttcag
atccggaaaccggcatcgaccctgtccgacgtggccccctcgcgcaggacctcacggccc
gtcatcatctccagcagcgcggtcaagaaagccagcactcagcaccggccgctccgagag
cgcctggtccacctgctggccctcaagccttacaagaagcccgagctgctcctcaggttg
cagaaagacggcctcttgcagtctgacaaagacgccatggacagccacctgcaacaggtg
gcaaacttgaatggcaaagataacaccctcacactaaaagactttttatataaggaagtt
cacaaagaatggcccggatacacggaaggagaccagcagcttctcaagagaatcttgttc
cggaagcagtgccagtctcggaacagtgccgctcctcctccagagagcccgcccaaggag
ttagccagcagctcaccgtctcagaaacgtcccgctgcagactttattgaccccctcgcc
aataagaagccgaggatatcgcaccttgccagcaaagctgcacccagtcctattaatggc
aagctcaactcatccaacggcaaaggggaggcaggcggagcgcagccgggactcgccgct
cacctgtcggacgccgccccgtcgtccggctcccagccgcttgccatgctggatatcccg
cgaccatttgaagcgttgtcagacgtcagcaacgactccagccataacggcaaagactgc
gacgtccaggaaaccacggcggagagactcggccaagcgcctacgcttccttcggcgacg
gcgccgccgcccgccggcgcacctcccgctccgcccccccgcgccgagtcggcggccacc
ggcagcaaaaagcctaagaagaaatccaagaaacataaagacaaggagaagaaagacaaa
gagcgagccagaggtccagaagaagagaggaagagcccacactcagtgcctgagcctgac
agaacctgtgagatgagcccagaaaacctcaaaagcaacagtattccactcaaaagcaca
actctgaatgggatgtgcaatagtaccagtatttcatcgtcaccggaggtggccgactac
ttattgaaatacacagtgatcacatctccagagcagcgtcagaggtataaaaacgacttc
aattcggagtacaccgagtaccgcggtttgcacgctcgcatcgaaagcatcaccaggcac
ttcactgagctggacaatgagctgaagaagttgcagcaaggcacagacaagtacaagaca
atccacaatcagatactccaagagtatcataacattaaaaagatcaatccccactatagc
caagagaagaaccgctgtgaatatctgcacaacaaactggcacatatcaaaaaagtcatc
ggcgaatacgatcaacagcaactctga

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