Syngnathus scovelli (Gulf pipefish): 125974649
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Entry
125974649 CDS
T08785
Symbol
si:dkey-33i11.1
Name
(RefSeq) sialic acid-binding Ig-like lectin 16
KO
K06467
CD22 antigen
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125974649 (si:dkey-33i11.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sscv04515
]
125974649 (si:dkey-33i11.1)
04090 CD molecules [BR:
sscv04090
]
125974649 (si:dkey-33i11.1)
04091 Lectins [BR:
sscv04091
]
125974649 (si:dkey-33i11.1)
Cell adhesion molecules [BR:
sscv04515
]
Immunoglobulin superfamily
SIGLEC family
125974649 (si:dkey-33i11.1)
CD molecules [BR:
sscv04090
]
Proteins
125974649 (si:dkey-33i11.1)
Lectins [BR:
sscv04091
]
I-type lectins (Siglecs)
125974649 (si:dkey-33i11.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
ig
V-set
I-set
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
125974649
NCBI-ProteinID:
XP_049585299
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Position
9:complement(899853..906921)
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AA seq
649 aa
AA seq
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MLSGALLLATILTTLPGGQGGWSVSFSRKEMCVWAGTTVTLPCRYDYPAGHTVKQVMWFR
VSADGQREFSHHTDANQMGLSFRGRTRYIGGSYSSCSVQIRAVKLSDAGQYHFRFETDQP
LGRWTSPDTVTLHVTDLQVQVHPSRPSNMFGFAETVFVGCQATGCAAPGRSLALYRNGLN
LGSYDKWMIIQRFDRAHVGAYICRPIPPQNVQSPALSLALGHAPRSTSIHISSIGEVSEG
GSVTLSCSSDAAPPVESFAWFKDMEMDSIPDIFGPHLHLSHLKSTDRGEYFCVARNSLGT
ERSKALLLNVTFSPKNTRVLITPPGDIGEGTYVNLSCISHAQPPTSRHAWYRIIGEQVIA
KGSVQNLTFPSVRAHHAGLYYCKAWNPLGHQTSHPTTLSVLYPPKNTSVLARPSSVVDAG
RPLTLTCSSQANPAVDNFTWHRLTHNGAPVQSWGSRTGPVFTFSEVGPRESGQYYCEARN
RMGVHSSPVLTVQVRGRLKVIALASVVGVSAGLITLTVAIMISKNMHTVDMESAGVASKR
PSLAADTMFYETTQPLRETFMSDIPEEPEDLSDSSHPAIVPLKDAPPITKAPTHSPASKS
VTVHDSRRLSRGEQVQVQKLPLEGDTKPKESTKVVSILLPSQHFHHICH
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaggtgcgctactcctggccacgatacttacaactttaccagggggccaaggc
gggtggagcgtgtccttttcccgaaaagagatgtgtgtgtgggcaggaacaactgttacg
ctgccctgtcgctatgattatccagcaggtcacaccgtgaagcaggtcatgtggtttcgg
gtttcagcagatggtcaaagggagttcagccatcacacagacgcaaaccaaatgggcttg
tcttttcgcggacgcacgcgctacattggcggaagctattccagctgttcggtccaaatt
cgggctgtcaagctgagtgatgcaggccagtaccacttcaggtttgagacggaccaaccg
ctgggcagatggacctctccagacaccgtcactctccacgtaacagacctccaggtccag
gtgcatccaagcaggccatccaacatgtttggctttgcagagactgtgtttgtaggctgc
caggccacaggatgcgctgctccaggaagaagcctcgcattgtacaggaatgggctgaac
ctgggttcctatgataaatggatgattatccaacgctttgaccgagcgcacgtcggagcg
tatatctgtcggccaatcccgccgcagaatgtgcagtccccggccctctctctggctctt
ggccatgctcctcgttctacctccatccacatttcttctataggagaggtgtcggagggt
ggctcagtcactctgtcgtgcagtagtgacgcggctccacccgtagagagctttgcctgg
ttcaaagacatggagatggacagcatcccagacatttttgggcctcacctccacctttct
cacctcaaatccacagacagaggagagtacttttgcgtggctcggaactccttgggaacg
gaacgctccaaagcgcttcttctcaatgtgacattctcccccaaaaatacccgtgtgctg
ataacaccgcccggtgacattggagaaggcacctatgtgaacctcagctgtatcagccat
gcccagccacctaccagcaggcatgcatggtatcgcatcataggagagcaggtgatagca
aaaggaagcgtccagaatttgaccttcccctcggtgcgcgctcaccacgctggtctgtac
tactgcaaggcgtggaacccattaggacatcaaacttctcatcccaccactcttagcgtg
ctgtatcctcccaagaacacttcagtgctggctcgcccttccagcgtggtggacgccggg
cggcctttgactctgacctgcagcagtcaggccaacccggccgtggacaacttcacttgg
catcgtttaacgcacaacggagcgccagtgcaatcgtggggcagccggaccggtcccgtg
ttcacattctcagaggtcggaccgagagaaagtggccagtactactgtgaggccagaaac
cgcatgggagtccacagctctcctgtccttacggtgcaagtccgaggacgactaaaggtt
attgctttggcatcggtggtgggcgtgtctgctgggctcatcactctgacggtggccatt
atgattagtaagaacatgcacacagttgacatggaatcagctggagtagcatccaagcgg
ccttcgcttgcagcagacaccatgttttatgagacaacccaaccattgagagagaccttc
atgtctgacataccggaggaacctgaagacttgagtgacagctcccatcctgcaattgtt
cctctcaaggacgctcctccaatcacaaaagctccaacccacagccctgcctccaaatcg
gttaccgtccacgactccagaagattgtcaaggggcgagcaggtgcaggtccaaaagctg
ccacttgagggcgacacaaaaccaaaggagtcgacgaaagttgtttccattctgctgccg
tcgcagcactttcaccacatttgtcactaa
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