Syngnathus scovelli (Gulf pipefish): 125974652
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Entry
125974652 CDS
T08785
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125974652 (lingo4b)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
125974652 (lingo4b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_LRWD1
LRR_9
Ig_2
ig
LRR_Zer-1
LRRNT
C2-set_2
V-set
Ig_5
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
125974652
NCBI-ProteinID:
XP_049585309
LinkDB
All DBs
Position
9:1479106..1485605
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AA seq
604 aa
AA seq
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MFAESLGGWLAWGILLQVGLDVSAGSCPPRCSCRPDAKEVICSGKHLNSVPEGFPGDAKH
LDLTYNKIRTVGRRQFSGLHELQDLDLSDNMISMIEVEAFQGLQNLRTLRIKNNRLKILP
VGVFSGLSGLRYLDLSHNEILVFLDYTFRETVNLQTLDADENDLVFISQRAFFGLQSLQE
LNINRSNLTSIPTEALSHLQSLTYLRMLRLTITTLPNNAFRRLHRLHTLILANWPSLDTV
AGNSFTGLNLTALVISSCNLSTVPYSALRHLAYLRFLDLSYNPITVVQGNLLRDLQRLQE
LHLAGGNLLRVEPGAFKGLASLRMLNLTSNQLTTLEESTLHSVGNLQVLRLDGNPLSCDC
RLLWVVRRRVRLNFDGRQPTCSSHDAAKQREFRDFSEKELTRVFTCRPARILDRRPQEAR
VEDGTTVLFTCKADGDPAPSITWISSHRSVISPAGRIRALPNGTLEVRFAQVHDSGTYQC
LAGNAAGNDSITVGLYVKGGQRNQTIPFFPEEDWLEEPLIPQATNSSAQQAKPYPFDAKT
LIIATTMGFLSFLSSVAICFIFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGGDGGRFT
MKLI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcggagtctctgggtggatggctggcgtggggcatcctgctccaggtgggactg
gacgtctccgcagggagctgccctcctcgatgctcgtgtcggcccgacgctaaggaagtc
atctgctccgggaaacatttgaactccgtcccggagggctttcccggcgatgcgaagcat
ttggatttaacctacaacaaaattcggacggtggggcgccgccagttctctggcctccat
gaacttcaagatctggacctcagtgacaatatgatctccatgattgaggtggaagctttt
caggggctacagaatctcaggacgcttcggattaagaataatcggctcaagatcctcccc
gtgggtgttttctctggcctgtccggtctacgatatctcgatctgagccataatgagatt
ctggttttcctggactacaccttcagagagacggtgaatctgcagacgctggacgccgac
gagaatgacttggtgttcatttcccagcgagctttctttggtttgcagagtttgcaggag
ctcaacatcaatcgtagtaatttgacgtccattcccaccgaggcgttgtctcacctgcag
agcctcacgtaccttcgcatgctgcgcctcaccattacgacgctgcctaacaatgctttc
cgccgactgcaccggctgcacaccctgatcctggccaactggccctcgctggacacggtc
gccggcaacagctttaccggactcaacctgaccgctctggtcatcagcagctgcaacctc
agcacggtgccgtactcagctctgcgtcacctggcctacctgcgtttcctggacctgtcc
tacaaccccatcactgttgttcaagggaatctgttacgggacctccaaagactccaagag
ttacatctagccggcgggaacctgctgcgggtcgagccgggggccttcaagggtctcgcc
tcgctccgaatgctcaacttgacatcaaaccagctgacgactttagaggagagcaccttg
cactcagtggggaaccttcaggtgctgaggttggatgggaatcccctgtcctgcgactgc
cgtctgctctgggtggtccgtcggcgagtacgcttgaactttgacggacggcaacccacg
tgctcgtcccacgacgcagcgaagcagcgagaatttagggacttttccgaaaaggagctg
acaagggtcttcacctgccggcccgctcgaatcctggaccgtaggccgcaggaagccagg
gtggaggacggcactaccgttcttttcacctgcaaggcggatggggatccggcaccgtcc
atcacttggatctcatcccacaggagcgtgatttctccggcgggaagaatcagagctttg
cccaacggtaccctggaggtgcggttcgcgcaggtccacgacagcggcacctatcagtgc
ctcgcgggcaacgccgccggcaacgacagcatcacggtcggcctctacgtgaaggggggc
cagcgtaaccagaccatccccttcttcccagaggaggactggttagaagagcccctgatc
cctcaagccaccaactcctcggctcaacaggcaaagccgtacccctttgacgccaagacg
ctgatcatcgccaccaccatgggtttcctgtccttcctcagctcggtggccatctgcttc
atcttcatgttcttttggagccagagcaaaggccagatcaagcacacggccaccatcgac
tttgtccctcgctcctccatgggcggcggaggggacggcggcgacggcggcaggttcacc
atgaaactcatttaa
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