Syngnathus scovelli (Gulf pipefish): 125974657
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Entry
125974657 CDS
T08785
Name
(RefSeq) chondroitin sulfate proteoglycan 5 isoform X1
KO
K08116
chondroitin sulfate proteoglycan 5
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sscv00535
]
125974657
Proteoglycans [BR:
sscv00535
]
Cell surface proteoglycans
Others
125974657
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GFIT
Motif
Pfam:
Neural_ProG_Cyt
TMEM213
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
125974657
NCBI-ProteinID:
XP_049585316
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Position
9:1278802..1288731
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AA seq
529 aa
AA seq
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MLLNEEDSSSSSFSSSSRARSCAVDCACTPSMETSSCTGSCRRRTRMARALFSLLLLHFI
SVHGVVTATNTTELAASSNGTVPLSEQEGPTDVSRAVTMGSGSVNTVTPRVGRVARGSGE
EEELSSGMLAPEVGGTPSPSQISLDSAETELLLPGNRLPADVAEEEPLARTDPPWINVRD
TAVFDLDRPSAGAPPATNADVLHVDFFDPASRGRNLDLAPRPTSSLAHELQGGDPTSWAM
PDSYDYLTPYEDGVSPTADEYPDTTTDNSDSPARPKSAGPASYLPNGPRRATPADGSDGM
GGCRPGYQMVNATCRSPCDFDPNFCYNGGQCYLLEDAGTFCRCNVQDYIWHKGARCEAVV
TEFQVMCLAVGASAVVVLLLFMMVVCFAKKLHVLKTENKKLRRRSKYRPTSEAHNDNFSL
STIAEGSHPNVRKLCDTPPNAPHARALAYYDNIICQKTMSRYTWECKTKEESDCEDDPNS
QNKLEEPVKAPPKEDDALNIHNALTPKHDNHKLLGDDDSEVNSLQNNMM
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaatgaagaagactcctcttcctcttctttttcgtcttcttcacgcgcacgt
tcctgtgctgtggactgcgcgtgcacgccgagcatggagaccagctcgtgcacgggaagc
tgccgccgacgcacgcggatggcgcgcgcactcttttcgctgctgctgttgcacttcatc
tccgtgcacggagtcgtcacggcgaccaacaccaccgagctggccgcctcctcaaacggg
accgtcccgctgagcgagcaggagggtcccaccgatgtcagccgtgccgtcaccatggga
agtggttccgtcaacactgtgacacccagggtgggccgcgtggcccgcggcagcggtgag
gaggaggagctaagcagcggcatgttagcgccggaagtaggcggtacaccctcgccatct
cagatcagcctggattcggcggagacggagctgctgttacccggcaaccgtctgccagcc
gacgtcgcggaggaggagcctctggcgcggaccgatccgccgtggatcaacgtcagagac
acggccgtgttcgacctggaccgaccgtccgccggcgcccctccggcgaccaacgccgac
gtcctccacgtggactttttcgatcccgcctcccgtggacgtaacctggacttggccccg
cgacccacctcctcgctggctcacgagctccagggcggcgacccgacgtcctgggccatg
cctgacagctacgactacctgaccccgtacgaggacggggtgtcccccaccgccgacgag
taccccgacaccaccactgacaacagcgactccccggctcgacccaagtcggcgggtccc
gcgtcttacctgccgaacggcccccggcgcgccacccctgcggacggctccgacgggatg
ggcggctgtcgcccgggctaccagatggtcaatgctacttgtcgctccccatgtgacttt
gaccccaacttctgctataatggagggcaatgttacttactcgaagacgccggaacattc
tgcaggtgcaacgttcaagactacatctggcacaaaggtgcccgctgcgaggcggtggtg
acggagttccaggtgatgtgtttggcggtcggtgcgtcggccgtggtggtcctgctgctt
ttcatgatggtggtctgcttcgctaagaagctccacgtactcaagactgaaaataagaag
ctgcgcagacgcagtaagtaccggcccacgtcggaggctcacaatgataatttctcgctg
tccaccatcgctgagggctcccacccaaacgtaaggaaactgtgcgacacccctcctaac
gccccccatgcccgtgcattggcttactatgataacattatctgtcagaaaaccatgagc
agatatacgtgggagtgtaagaccaaagaggagtccgactgcgaggatgatcctaattcc
cagaacaagctggaggagccagtgaaggccccgcccaaggaagacgacgccctcaacatc
cacaacgcgctgacgcccaaacacgacaaccacaagctgctgggcgacgacgactcggag
gtcaactctctgcagaacaacatgatgtga
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