Syngnathus scovelli (Gulf pipefish): 125974670
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Entry
125974670 CDS
T08785
Name
(RefSeq) complement C1q tumor necrosis factor-related protein 4
KO
K23284
C1q-related factor
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125974670
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Phagocytosis
Opsonins
125974670
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C1q
BclA_C
PPC
OCRE
TMF_DNA_bd
PA14
WEMBL
TolA_bind_tri
Metal_resist
DUF4763
Motif
Other DBs
NCBI-GeneID:
125974670
NCBI-ProteinID:
XP_049585354
LinkDB
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Position
9:1224054..1226342
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AA seq
382 aa
AA seq
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MFARVALVLLLTVAVARCGPTPQLDRRAEIDGIRAAMEDLKADRRAMMQRLERAEKELNT
VRESPKIAFAASLGGNGGQKTTTGNRDLIYRDVLTNVGGAYNAETGVFTAPVRGVYYIRF
TANAPTDFTMSAVLYKNDAQIQLIVHEQPSGEGSDTASNGAALLLEKGDRLKMVLWHNTQ
IWDNSNHHSTFSGFLVFPLVDEAPKEFDVELEMKRLQASMTQLQTENTELKGRMESTETE
LRNMRNVPKVAFAASLGGNGLQKTTSGMKKLLFKDVLTNIGEAYNPETGYFTAPVRGVYY
IRFTANAPADFTMSAVLYKNDAQIQLITHEQPSGEGSDTASNGATLLLEKGDKLSLTLWH
NTQIWDNSNHHSTFSGFLLFTQ
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacgtgtcgcactggtgcttttgctaacggtggcggtcgcgcggtgcggcccg
actccccagctggaccgccgggccgagattgacggcatccgggcggctatggaggacctg
aaggccgacagacgagccatgatgcagcgtctggagagggccgagaaggagctgaacaca
gtccgagaaagcccaaagattgcctttgccgcctcgctggggggaaacggcggccagaag
acgacgacgggaaacagagatctcatttacagggacgtgctgaccaatgtaggcggggct
tataacgcagagactggcgtgttcacggcacccgttcgcggcgtctactacatccgcttc
accgccaacgcgcccaccgacttcaccatgagcgccgtgctgtacaagaacgacgcccag
atccagctcatcgtccacgagcagccgtcgggtgagggcagcgacacggcgtccaacggc
gccgccctgctgttggagaagggcgacaggctgaagatggtgctgtggcataacacgcaa
atctgggacaacagcaatcaccacagcaccttcagcggattcctggttttcccactggtc
gacgaagctccaaaggagtttgacgtcgagttggagatgaaaaggcttcaagcttccatg
acgcaactccaaacggaaaacacggaactcaaaggacggatggagagcaccgagacggag
ctgaggaatatgagaaatgtgccaaaggtggcgtttgcggcgtctctggggggtaacggt
ctccagaagaccacgtccggaatgaagaagcttctcttcaaggacgtcctcaccaacatt
ggtgaagcgtacaacccggaaacaggttatttcacggcacccgtacggggcgtctactac
atccgcttcaccgccaacgcccccgccgacttcaccatgagcgccgtgctttacaagaac
gacgcccaaatccagctcatcacccacgagcagccgtccggcgagggcagcgacacggcg
tctaacggcgccaccctgctgctggaaaagggcgataagctctcgctgactctctggcac
aacacgcaaatctgggacaacagcaaccaccacagcaccttcagtggattcctgctcttc
acccagtag
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