Syngnathus scovelli (Gulf pipefish): 125974767
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Entry
125974767 CDS
T08785
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125974767 (irx1a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125974767 (irx1a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
125974767
NCBI-ProteinID:
XP_049585521
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All DBs
Position
9:6438191..6442027
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AA seq
487 aa
AA seq
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MSFPQLGYPQYLSASQAVYGSERAGVLTPSSRGGSTEIGGSPSATAAAVTSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYDLKDSPGVHPASFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGSRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDKSTDG
GTREHRGDGDAEGALDSLEKRRAFSLQGHEALDKSKSSISVHPGCKDNTDATSNTTRVLS
PDRPGGFPLPSNNKPKIWSLAETATTPDSSAQKPTSPSGPVPPSHPQIQAHPAFLPSHGL
YTCQIGKFHNWTNGAFLGQNSLLNVRSFLGSHHHHHQHQNHHLAPQQQPTSVVVSPLAAA
AALSQDSKAPMDSPKHIEHENGVRCDSPPTPTLKPSFRPLHDRSSLPSSARSPQDATQRV
LTALSSA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccccagctagggtacccgcagtacttaagtgcctcccaggctgtttacggg
agcgaaagggcgggcgtgctaacgccttcctcccggggagggagcaccgaaatcggaggg
agtccgtcagccaccgccgcggccgtcacgtccgtgttgggcatgtacgccaacccgtac
gcgcacaactacagtgctttcctaccttacaccagtgcggatctggctcttttctcacaa
atgggatcccaatacgacttgaaagacagtcctggcgtccaccctgccagcttcgcagct
cacacctctcctgccttctacccatatggtcaattccagtacggggaccccgccagacct
aagaacgcaacacgggagagcaccagcaccctgaaagcctggcttaacgagcaccgaaag
aacccttatcccactaagggggagaagatcatgctggcaatcatcaccaagatgaccctg
acgcaggtctccacctggttcgctaacgccaggaggagactgaagaaggagaacaaggtg
acatgggggagcaggagcaaagaggacggggaggacggcaatttattcggcagcggggac
gaggcagagaaaaatgaggatgaggaggagattgacttggagagcatagatatagacaaa
atagatgataacgacggggatcagagtaatgaggatgatgatgataaatccaccgacggg
ggcacgagggagcacagaggcgatggggacgcagagggagcgctggacagcttggagaaa
agacgggccttcagcctgcagggccacgaggccttggacaaatcaaaaagctccatttca
gtacatccaggctgcaaagacaacacggacgctaccagcaacaccacacgggtactttct
cccgacagacctgggggcttccccttgccctcaaacaataagcccaaaatatggtcgtta
gcggaaaccgctacgacacctgactcttcggcccagaaacccacatctccttctggacca
gtgcccccctctcaccctcagatccaggcccaccccgccttcctcccaagccacggactg
tacacttgccaaattggaaagttccacaactggacgaacggggcttttctgggtcagaac
tccctgctcaacgtgagatcctttctagggagtcaccatcaccaccaccaacaccaaaat
caccacctggcgccccagcagcagccgacgtcagtggtggtgtccccgctagcagctgct
gcggccctcagccaagacagcaaggccccaatggacagtcccaaacacatagaacatgaa
aatggtgtacgatgcgattcacctccaacaccaaccctgaagccttcttttcgacccctt
catgacagatcatccctgccttccagcgccaggagtccacaggatgctacacaacgggtc
ctcactgctctctcttcggcttga
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