Syngnathus scovelli (Gulf pipefish): 125974777
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Entry
125974777 CDS
T08785
Symbol
satb1b
Name
(RefSeq) SATB homeobox 1b isoform X1
KO
K23225
DNA-binding protein SATB1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125974777 (satb1b)
03036 Chromosome and associated proteins [BR:
sscv03036
]
125974777 (satb1b)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
125974777 (satb1b)
Chromosome and associated proteins [BR:
sscv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125974777 (satb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUTL
ULD
CUT
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
125974777
NCBI-ProteinID:
XP_049585530
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Position
9:complement(2042544..2084276)
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AA seq
859 aa
AA seq
DB search
MMMDHLSETCLGKENAELVNSMAEAKPPPAKLPRMEQNGSPLGRARLGSTGAKLSGLPYK
PANHLLKTYHKRGNMLPVFCVVEHYENPLDFDSKEEHAEFVLVRKDMLFNQLIEMALLSL
GYSHSSAAQAKGMIQVGKWNPIPLSYVTDAPDATVADMLQDVYHVVTLKIQLHSCPKLED
LPPEQWSHSTVRNALKELLKDMNQSSLAKECPLSQSMISSIVNSTYYANVSAAKCQEFGR
WYKHFKKTKDMMGIRQSSQLEGYLGTCVLRESPRANALAEMDGLSDLSPPGSNHNHNHLG
FSQQQQQQQQQPIPGSTAEQTPSSPVPPLSHAPPPPPQHGGGQAGGRQMPPGLHHPGLVS
TPISPQLVNQQLVMAQILNQQYAVNRLLAQQSLSQQYLNHPPVNRSSHAKPLEPQVGSNT
EVSSEIYQWVRDELKRAGISQAVFARVAFNRTQGLLSEILRKEEDPKTASQSLLVNLRAM
QNFLQLPEAERDRIYQEERERSLTAASAMGAAPLISTPPNRPVQPRREDCNSVRPEDWNP
RIPVGLSPQVKPSPLPSEWNGKTESCILNINSNIYDEIQGEMKRAKVSQALFAKVAASKS
QGWLCELLRWKEDPSPENRTLWENLSMIRRFLSLSQAERDAIYEQESSAGQQHHNNAADR
PPHFSHISADQLQPQHQSALSLQHPSQPLPSQQPPSGPRLPPRQPSTASPAETEDDVVRS
LVKSRGGKISLEALGILQSFIQDVGPYPDEEAVHTLSAQLDLPKLTIIKFFQNQRFYVSQ
PAKGPKESSPANSGARSGSCSSSSGGGGSSPAALDEEPSEPGEVLKETEESTQTNAFVVK
TEEQLGRGGPTPVMEQAHD
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaccatctcagcgagacgtgtctgggcaaggagaacgccgagctggtcaac
agcatggccgaggccaagccgccgcccgccaagctgcctcgcatggagcagaacggcagc
cccctggggagggccaggctgggcagtaccggcgccaaactgtccggactgccctacaag
cccgccaatcacctcctgaagacctaccacaagcgtggcaacatgctgcccgtcttctgc
gtggtggagcactacgagaaccccttggattttgacagcaaggaggagcacgccgagttc
gtgctggtccgcaaggacatgctcttcaaccagctcatcgagatggcgctgctctcgcta
ggctactcgcacagctcagccgcccaggccaaaggtatgattcaggtgggcaagtggaac
cccatccccctgtcatacgtgacggacgcgcctgacgccacggtggccgacatgctgcag
gatgtctaccacgtggtcacgctcaagatccagctgcacagttgtcctaagctggaggac
ctgccaccagagcaatggagccactctacagtaagaaacgccctcaaggagttactcaaa
gacatgaatcagagctctctggctaaagaatgccccttatcacagagtatgatttcctcc
attgtcaacagcacttactatgcaaatgtgtcagcggcaaagtgtcaagaattcgggcgc
tggtataaacatttcaagaagacaaaggatatgatgggcattcgtcaatcttcccagctg
gagggctacctgggcacgtgcgtccttcgcgagagcccccgtgctaatgcgctagccgag
atggacggcctgtccgacttgtctcctcccggctccaaccacaatcacaaccacctgggc
ttctcccagcagcagcagcagcagcaacaacagcccatcccgggcagcacggcggagcag
accccctcgtcccccgtgcccccgctgtcccacgccccgccgccacccccgcagcacggc
gggggtcaagcgggcgggcggcagatgccccccggcctgcaccacccgggcctggtgtcc
actcccatcagcccccagctggtcaaccagcagctggtgatggcgcagatcctcaaccag
cagtacgccgtcaaccgtctgttggcgcagcagtcgctgtcgcaacagtaccttaaccac
ccgcccgtcaaccgcagctcgcacgccaagcccctggagccccaggtggggtccaacacc
gaggtgtcctccgagatctaccagtgggtccgagacgagctcaagcgggcgggcatatcg
caggccgtctttgcccgagtggccttcaacagaactcagggcttattgtctgagatcctg
cgcaaagaagaggacccgaaaacagcctcgcagtcgctgctggttaacctgcgcgccatg
caaaacttcctgcagctgcccgaggccgagcgtgaccggatttaccaggaggagagagag
cgcagcctgaccgccgcgtccgccatgggcgccgccccgctcatcagcacacccccaaac
cggcctgttcagccacgaagagaagactgtaatagcgtgcggcccgaagactggaaccct
cgcattcccgtgggcctttctcctcaggtgaagccatcccctctgcccagcgagtggaac
ggcaaaacggagagctgcatcctcaacatcaactctaacatctacgacgagatccaggga
gagatgaagagggccaaagtctctcaggcgctctttgccaaagtggccgcctccaaaagc
cagggttggctgtgcgagcttctgcgctggaaggaggatccgtctccggagaaccggacg
ctgtgggagaatttgtccatgatccgccgcttcctcagcctgtcgcaggccgagcgcgac
gccatctacgagcaggagagcagcgccgggcagcaacatcacaacaacgccgctgacagg
ccgccgcacttctcacacatctcggcagaccagctgcagcctcagcaccaatcggccctg
tccctgcagcacccgtcccagccgctcccgtctcagcagcccccctcgggcccccgcctg
ccccctcgccagccctccaccgcctccccggccgagacggaggacgacgtggtgcgcagc
ctggtcaagtcgcgcggcggaaagatctccctggaggcgcttggcatcctgcagagcttc
atccaggacgtcggcccgtacccggacgaggaggccgtccacacgctgtccgcccagctg
gacctccccaaactcaccatcatcaagttcttccagaaccagcgcttctacgtcagccag
ccggccaaagggcccaaggagagctcccctgccaacagcggcgccaggagcggcagctgc
agtagcagcagcggcggcggcggcagcagccccgccgccttggacgaggagccctcggag
cctggcgaggtcctcaaggagacggaggagagcacgcagaccaacgcctttgtggtcaag
acagaggagcagctgggtcgtggaggccctacccctgttatggagcaagctcatgactaa
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