Syngnathus scovelli (Gulf pipefish): 125974818
Help
Entry
125974818 CDS
T08785
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sscv03000
]
125974818 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sscv03310
]
125974818 (nr1d2a)
Transcription factors [BR:
sscv03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125974818 (nr1d2a)
Nuclear receptors [BR:
sscv03310
]
1. Thyroid hormone like
1D. Rev-Erb
125974818 (nr1d2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
zf-RRPl_C4
Motif
Other DBs
NCBI-GeneID:
125974818
NCBI-ProteinID:
XP_049585616
LinkDB
All DBs
Position
9:2182931..2188692
Genome browser
AA seq
584 aa
AA seq
DB search
MPEDVGPAKPGGVIAYISSGAASSPESCMSTSPGSVASGFLSTSPTPPRSSLPSRAVGMV
VDIAPPTKSGTRGGNGVEKAGRSSTSTKSSITKINGMVLLCKVCGDVASGFHYGVHACEG
CKGFFRRSIQQNIQYKKCLKMENCTIMRINRNRCQQCRFKKCLAVGMSRDAVRFGRIPKR
EKQRMLLEMQNAMNNMMSNNSQLHSMLHGHQSSSLPNDTSPSPSSSSSSSSSSSSSSSLS
SSSSESPSCSNPSSPQCPLQDAESVVSMDTNSSSSSSCGSDSGEDDVAVVRQTETTTSQS
ATENTADVRVDTAQQSWNCWNNNADDNDAAMPGYRDVPHMYAHFNQHVLQQQQQLSGAPV
CPMDIKQHQPQQPQQQRAYPNGRAHLVCPMNTSPYVDPSKPSQEIWEEFSMSFTPAVREV
VEFAKRIPGFKDLPEHDQVGLLKAGTFEVLMVRFASLFNMAERTVTFLSGKHYSLDTLRA
LGAGELLASMCDFSEKLTALRLDRDEMSLFTAVVLVSADRSGLQDLTAVEALQDKLIRAL
RQLLMQNHGEEAATTFTKLLLKLPELRSLNNMHSEELLSFKVHP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaggacgtcggaccagccaaacctggcggagtcatcgcctacatctcgtcgggc
gccgcttccagccccgagtcctgcatgagcaccagtcctggcagcgtggccagcggcttc
ctgtccacatcgcccacgcctcctcgctcctcactccccagcagggcggtgggcatggtg
gtggatatagcgccacctaccaagagcggaaccagaggaggaaacggcgtggagaaggcg
ggacgctcgtctacctcgaccaagagcagcattaccaaaatcaacggcatggtgctgctg
tgtaaagtttgcggcgacgtcgcctcgggcttccattacggcgtccacgcgtgcgaaggc
tgcaagggcttcttccgcaggagcatccagcagaacattcagtacaagaagtgtctcaag
atggagaactgcaccatcatgaggatcaacaggaaccgatgccagcagtgtcgcttcaag
aagtgcttggccgttggcatgtccagagatgctgtgcgattcggccgcatccccaagcgc
gagaagcagcgaatgcttctggagatgcagaacgccatgaacaacatgatgagcaacaac
agccagttgcacagtatgctgcacggccatcaaagctcgtcactgcccaatgacaccagc
ccctcgccatcatcatcatcctcctcctcgtcctcctcttcctcgtcgtcatcgttgtct
tcctcctcctcggagtcgccgtcctgctccaacccctcgtctccgcagtgccccctgcag
gacgccgagtcggtagtctccatggacaccaactccagctcgtcctcatcctgcggctca
gacagcggcgaggacgacgtcgccgtcgtgaggcaaacggagacgacgacgtcgcagtca
gcgacggaaaataccgccgacgtccgtgtggacacggcgcagcagagctggaactgctgg
aacaacaatgccgacgacaacgatgcggccatgccgggataccgggacgttccgcacatg
tatgcgcactttaatcagcatgtgctgcagcagcagcagcagctcagtggcgcccccgtc
tgtcccatggacataaagcagcaccagccgcagcagccacaacagcaacgggcttatccc
aatgggagagctcacttggtgtgtcccatgaacacgtccccgtacgttgaccccagcaag
cccagccaggagatctgggaggaattctccatgagcttcacaccggccgtgcgtgaggtg
gtggagttcgccaagaggatcccgggtttcaaggatctccccgagcacgaccaagtgggg
ctgctcaaggccgggaccttcgaggtgttgatggtgcgcttcgcgtcgctcttcaacatg
gccgagcgcacggtgaccttcctgagcggcaagcactacagcctggacacactacgagcg
ctgggcgccggagaacttctggcgtccatgtgcgactttagcgagaagctcaccgcgctc
aggctggaccgcgatgagatgagcctcttcaccgccgtcgtcctcgtctccgccgaccgg
tcgggtctacaggatctgacggcggttgaggccctgcaggataagctgatccgggccctg
cgccagctcctgatgcagaaccacggcgaggaggcggccaccaccttcaccaaactgctg
ctcaagctgcccgagctgcgatccctcaacaacatgcactcggaggagcttctctccttc
aaggtgcacccttga
DBGET
integrated database retrieval system
