Syngnathus scovelli (Gulf pipefish): 125974838
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Entry
125974838 CDS
T08785
Symbol
rab5ab
Name
(RefSeq) RAB5A, member RAS oncogene family, b
KO
K07887
Ras-related protein Rab-5A
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Pathway
sscv04137
Mitophagy - animal
sscv04144
Endocytosis
sscv04145
Phagosome
sscv04148
Efferocytosis
sscv05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125974838 (rab5ab)
04145 Phagosome
125974838 (rab5ab)
04137 Mitophagy - animal
125974838 (rab5ab)
04148 Efferocytosis
125974838 (rab5ab)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
125974838 (rab5ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sscv04131
]
125974838 (rab5ab)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sscv04147
]
125974838 (rab5ab)
04031 GTP-binding proteins [BR:
sscv04031
]
125974838 (rab5ab)
Membrane trafficking [BR:
sscv04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
125974838 (rab5ab)
Endosome - Lysosome transport
125974838 (rab5ab)
Exosome [BR:
sscv04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125974838 (rab5ab)
Exosomal proteins of other body fluids (saliva and urine)
125974838 (rab5ab)
Exosomal proteins of colorectal cancer cells
125974838 (rab5ab)
Exosomal proteins of bladder cancer cells
125974838 (rab5ab)
GTP-binding proteins [BR:
sscv04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
125974838 (rab5ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
125974838
NCBI-ProteinID:
XP_049585659
LinkDB
All DBs
Position
9:2102999..2106470
Genome browser
AA seq
216 aa
AA seq
DB search
MASRGGATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFVRAKNWVKELQ
RQASPNIVIALAGNKADLASKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
KLPKNEPQTAGASGGRNRGVDLTETAQPSSRTCCSN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtagaggcggagctacccggcccaatgggcccaacgccggcaacaagatctgc
cagttcaaacttgtgctgctgggggagtcggcggtggggaagtcgagtctggtgctccgc
ttcgtcaagggacagttccacgaattccaggagagcaccattggagctgccttcttgact
cagacggtatgcttggacgacacgacggtcaagtttgaaatctgggacacggccggtcag
gaacgctaccacagtctggcccctatgtactacagaggcgcccaggccgccatcgtggtc
tatgacatcaccaacgaggagtcattcgtgcgggcaaagaactgggtgaaggagctccag
aggcaagccagtcccaacatcgtcattgcacttgccggcaacaaagccgacctggccagc
aagcgagcgcttgacttccaggacgcacaatcgtacgccgacgacaacagcctgctcttc
atggagacgtcggcaaagacctccatgaacgtcaacgagattttcatggccatcgccaag
aagctccccaagaacgagccccagacagccggcgccagcggcgggcggaaccggggcgtg
gacctgaccgagacggcccaacccagcagccgcacctgttgcagtaactag
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